Gene annotation
Transcriptome id Sobic.001G083701.1
Synonym -
Functional annotation -
UniProt A0A1Z5S5C5
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G157300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@zinc finger, C3HC4 type domain containing protein, expressed -
2 Sobic.009G137300 - -
3 Sobic.010G218200 FAD binding domain of DNA photolyase domain containing protein, expressed K01669: deoxyribodipyrimidine photo-lyase
4 Sobic.001G536901 - -
5 Sobic.002G025600 - -
6 Sobic.006G093100 ferric-chelate reductase, putative, expressed -
7 Sobic.009G242100 chloroplast unusual positioning protein, putative, expressed -
8 Sobic.002G232200 MATE efflux family protein, putative, expressed K03327: TC.MATE, SLC47A, norM, mdtK, multidrug resistance protein, MATE family
9 Sobic.002G390100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Interacting factor of CBLs(PubMedID : 19860013)@CAMK_KIN1/SNF1/Nim1_like.29 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K07198: PRKAA, 5'-AMP-activated protein kinase, catalytic alpha subunit
10 Sobic.002G049600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
11 Sobic.002G196600 1-phosphatidylinositol-4-phosphate 5-kinase/ zinc ion binding protein, putative, expressed K00921: PIKFYVE, 1-phosphatidylinositol-3-phosphate 5-kinase
12 Sobic.004G235700 mTERF family protein, expressed K15032: mTERF domain-containing protein, mitochondrial
13 Sobic.001G540300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
14 Sobic.004G165500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
15 Sobic.010G227900 WD domain, G-beta repeat domain containing protein, expressed -
16 Sobic.003G036200 NADP-ME(PubMedID : 19549309)@"SbC4-NADP-ME (L-malate:NADP oxidoreductase, E.C. 1.1.1.40)"(PubMedID : 23228551)@NADP-malic enzyme 4(PubMedID : 26465154)@NADP-malic enzyme(PubMedID : 26904072)@-(PubMedID : 26976818)@NADP-dependent malic enzyme(PubMedID : 27016024)@NADP-dependent malic enzyme, chloroplast precursor, putative, expressed K00029: E1.1.1.40, malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+)
17 Sobic.003G426700 expressed protein -
18 Sobic.001G331500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
19 Sobic.008G033200 stem-specific protein TSJT1, putative, expressed -
20 Sobic.007G045500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@transporter, major facilitator family, putative, expressed K13783: MFS transporter, OPA family, solute carrier family 37 (glycerol-3-phosphate transporter), member 1/2


Gene co-expression network
sample Sobic001G083701 Sobic001G083701 Sobic010G157300 Sobic010G157300 Sobic001G083701--Sobic010G157300 Sobic009G137300 Sobic009G137300 Sobic001G083701--Sobic009G137300 Sobic010G218200 Sobic010G218200 Sobic001G083701--Sobic010G218200 Sobic001G536901 Sobic001G536901 Sobic001G083701--Sobic001G536901 Sobic002G025600 Sobic002G025600 Sobic001G083701--Sobic002G025600 Sobic006G093100 Sobic006G093100 Sobic001G083701--Sobic006G093100 Sobic009G242100 Sobic009G242100 Sobic001G083701--Sobic009G242100 Sobic002G232200 Sobic002G232200 Sobic001G083701--Sobic002G232200 Sobic002G390100 Sobic002G390100 Sobic001G083701--Sobic002G390100 Sobic002G408100 Sobic002G408100 Sobic010G157300--Sobic002G408100 Sobic010G157300--Sobic009G242100 Sobic002G049600 Sobic002G049600 Sobic010G157300--Sobic002G049600 Sobic003G426700 Sobic003G426700 Sobic010G157300--Sobic003G426700 Sobic003G342100 Sobic003G342100 Sobic010G157300--Sobic003G342100 Sobic010G157300--Sobic002G390100 Sobic001G540300 Sobic001G540300 Sobic010G157300--Sobic001G540300 Sobic002G237900 Sobic002G237900 Sobic010G157300--Sobic002G237900 Sobic003G036200 Sobic003G036200 Sobic010G157300--Sobic003G036200 Sobic007G189600 Sobic007G189600 Sobic009G137300--Sobic007G189600 Sobic009G137300--Sobic001G536901 Sobic003G256700 Sobic003G256700 Sobic009G137300--Sobic003G256700 Sobic010G162500 Sobic010G162500 Sobic009G137300--Sobic010G162500 Sobic002G324500 Sobic002G324500 Sobic009G137300--Sobic002G324500 Sobic001G252401 Sobic001G252401 Sobic009G137300--Sobic001G252401 Sobic008G047100 Sobic008G047100 Sobic009G137300--Sobic008G047100 Sobic005G101300 Sobic005G101300 Sobic009G137300--Sobic005G101300 Sobic005G039600 Sobic005G039600 Sobic009G137300--Sobic005G039600 Sobic010G218200--Sobic002G390100 Sobic009G194500 Sobic009G194500 Sobic010G218200--Sobic009G194500 Sobic006G161500 Sobic006G161500 Sobic010G218200--Sobic006G161500 Sobic002G196600 Sobic002G196600 Sobic010G218200--Sobic002G196600 Sobic003G042900 Sobic003G042900 Sobic010G218200--Sobic003G042900 Sobic001G073300 Sobic001G073300 Sobic010G218200--Sobic001G073300 Sobic008G129900 Sobic008G129900 Sobic010G218200--Sobic008G129900 Sobic010G231300 Sobic010G231300 Sobic010G218200--Sobic010G231300 Sobic002G119100 Sobic002G119100 Sobic010G218200--Sobic002G119100 Sobic001G536901--Sobic001G252401 Sobic001G410700 Sobic001G410700 Sobic001G536901--Sobic001G410700 Sobic001G536901--Sobic009G137300 Sobic003G403800 Sobic003G403800 Sobic001G536901--Sobic003G403800 Sobic010G201600 Sobic010G201600 Sobic001G536901--Sobic010G201600 Sobic004G342500 Sobic004G342500 Sobic001G536901--Sobic004G342500 Sobic003G318300 Sobic003G318300 Sobic001G536901--Sobic003G318300 Sobic001G093500 Sobic001G093500 Sobic001G536901--Sobic001G093500 Sobic001G536901--Sobic005G101300 Sobic005G145000 Sobic005G145000 Sobic002G025600--Sobic005G145000 Sobic001G317900 Sobic001G317900 Sobic002G025600--Sobic001G317900 Sobic005G083932 Sobic005G083932 Sobic002G025600--Sobic005G083932 Sobic008G174400 Sobic008G174400 Sobic002G025600--Sobic008G174400 Sobic002G191200 Sobic002G191200 Sobic002G025600--Sobic002G191200 Sobic002G373500 Sobic002G373500 Sobic002G025600--Sobic002G373500 Sobic004G215800 Sobic004G215800 Sobic006G093100--Sobic004G215800 Sobic006G093100--Sobic002G390100 Sobic006G093100--Sobic003G036200 Sobic006G093100--Sobic002G196600 Sobic007G105500 Sobic007G105500 Sobic006G093100--Sobic007G105500 Sobic008G033200 Sobic008G033200 Sobic006G093100--Sobic008G033200 Sobic006G093100--Sobic003G042900 Sobic008G033000 Sobic008G033000 Sobic006G093100--Sobic008G033000 Sobic002G404800 Sobic002G404800 Sobic006G093100--Sobic002G404800 Sobic008G117000 Sobic008G117000 Sobic009G242100--Sobic008G117000 Sobic009G242100--Sobic003G036200 Sobic009G242100--Sobic003G342100 Sobic001G073900 Sobic001G073900 Sobic009G242100--Sobic001G073900 Sobic009G242100--Sobic002G049600 Sobic009G242100--Sobic007G105500 Sobic003G332700 Sobic003G332700 Sobic009G242100--Sobic003G332700 Sobic001G134100 Sobic001G134100 Sobic009G242100--Sobic001G134100 Sobic010G255300 Sobic010G255300 Sobic009G242100--Sobic010G255300 Sobic002G232200--Sobic008G033200 Sobic006G055000 Sobic006G055000 Sobic002G232200--Sobic006G055000 Sobic002G232200--Sobic006G093100 Sobic002G232200--Sobic002G324500 Sobic002G232200--Sobic003G036200 Sobic005G001700 Sobic005G001700 Sobic002G232200--Sobic005G001700 Sobic002G232200--Sobic001G073900 Sobic002G232200--Sobic003G426700 Sobic002G232200--Sobic008G117000 Sobic002G390100--Sobic003G036200 Sobic002G390100--Sobic002G404800 Sobic009G256100 Sobic009G256100 Sobic002G390100--Sobic009G256100 Sobic005G068700 Sobic005G068700 Sobic002G390100--Sobic005G068700 Sobic002G390100--Sobic004G215800 Sobic002G390100--Sobic007G105500 Sobic002G390100--Sobic003G042900 Sobic010G104800 Sobic010G104800 Sobic002G390100--Sobic010G104800 Sobic002G390100--Sobic001G073300
Octagon: transcription factors


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