Gene annotation
Transcriptome id Sobic.004G235700.1
Synonym Sb04g027840
Functional annotation mTERF family protein, expressed
UniProt C5XYR5
Pfam PF02536
Panther DB PTHR13068 PTHR13068:SF33
NCBI CDD -
KEGG Orthology K15032; mTERF domain-containing protein, mitochondrial
Gene Ontology GO:0006355; regulation of transcription, DNA-templated GO:0005739mitochondrion GO:0003690double-stranded DNA binding


Orthologs (automatic annotation)
TAIR AT5G07900 : Mitochondrial transcription termination factor family protein
RAP-DB (Rice) LOC_Os02g51450.1 : mTERF family protein, expressed
MaizeGDB (Corn) Zm00025a022107
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G314400 peptidase, M24 family protein, putative, expressed K01265: methionyl aminopeptidase
2 Sobic.004G235600 mTERF family protein, expressed K15032: mTERF domain-containing protein, mitochondrial
3 Sobic.006G055000 TKL_IRAK_DUF26-lc.12 - DUF26 kinases have homology to DUF26 containing loci, expressed -
4 Sobic.004G211600 psaB translation factor, putative, expressed -
5 Sobic.001G037500 expressed protein -
6 Sobic.009G140000 MLO domain containing protein, putative, expressed K08472: mlo protein
7 Sobic.004G298900 OR, putative, expressed -
8 Sobic.002G049600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
9 Sobic.001G001300 rhodanese-like domain containing protein, putative, expressed -
10 Sobic.008G157600 BURP domain containing protein, expressed -
11 Sobic.005G111550 - -
12 Sobic.006G260800 phosphatidate cytidylyltransferase, putative, expressed K18678: phytol kinase
13 Sobic.001G242600 thaumatin family domain containing protein, expressed -
14 Sobic.006G105800 tyrosyl-tRNA synthetase, putative, expressed K01866: YARS, tyrosyl-tRNA synthetase
15 Sobic.001G521200 expressed protein -
16 Sobic.003G150800 preprotein translocase subunit secA, chloroplast precursor, putative, expressed K03070: preprotein translocase subunit SecA
17 Sobic.002G232200 MATE efflux family protein, putative, expressed K03327: TC.MATE, SLC47A, norM, mdtK, multidrug resistance protein, MATE family
18 Sobic.010G229450 - -
19 Sobic.003G085100 MYB family transcription factor, putative, expressed -
20 Sobic.005G063000 short chain dehydrogenase/reductase protein, putative, expressed -


Gene co-expression network
sample Sobic004G235700 Sobic004G235700 Sobic002G314400 Sobic002G314400 Sobic004G235700--Sobic002G314400 Sobic004G235600 Sobic004G235600 Sobic004G235700--Sobic004G235600 Sobic006G055000 Sobic006G055000 Sobic004G235700--Sobic006G055000 Sobic004G211600 Sobic004G211600 Sobic004G235700--Sobic004G211600 Sobic001G037500 Sobic001G037500 Sobic004G235700--Sobic001G037500 Sobic009G140000 Sobic009G140000 Sobic004G235700--Sobic009G140000 Sobic004G298900 Sobic004G298900 Sobic004G235700--Sobic004G298900 Sobic002G049600 Sobic002G049600 Sobic004G235700--Sobic002G049600 Sobic001G001300 Sobic001G001300 Sobic004G235700--Sobic001G001300 Sobic003G085100 Sobic003G085100 Sobic002G314400--Sobic003G085100 Sobic003G150800 Sobic003G150800 Sobic002G314400--Sobic003G150800 Sobic005G111550 Sobic005G111550 Sobic002G314400--Sobic005G111550 Sobic005G063000 Sobic005G063000 Sobic002G314400--Sobic005G063000 Sobic002G314400--Sobic004G235600 Sobic002G314400--Sobic001G001300 Sobic008G001900 Sobic008G001900 Sobic002G314400--Sobic008G001900 Sobic005G001700 Sobic005G001700 Sobic002G314400--Sobic005G001700 Sobic010G214100 Sobic010G214100 Sobic002G314400--Sobic010G214100 Sobic004G235600--Sobic008G001900 Sobic001G073900 Sobic001G073900 Sobic004G235600--Sobic001G073900 Sobic003G442700 Sobic003G442700 Sobic004G235600--Sobic003G442700 Sobic003G332700 Sobic003G332700 Sobic004G235600--Sobic003G332700 Sobic004G235600--Sobic003G085100 Sobic004G235600--Sobic005G001700 Sobic004G235600--Sobic002G314400 Sobic002G042500 Sobic002G042500 Sobic004G235600--Sobic002G042500 Sobic001G465700 Sobic001G465700 Sobic004G235600--Sobic001G465700 Sobic005G187900 Sobic005G187900 Sobic006G055000--Sobic005G187900 Sobic006G055000--Sobic009G140000 Sobic002G232200 Sobic002G232200 Sobic006G055000--Sobic002G232200 Sobic008G157600 Sobic008G157600 Sobic006G055000--Sobic008G157600 Sobic003G255900 Sobic003G255900 Sobic006G055000--Sobic003G255900 Sobic006G260800 Sobic006G260800 Sobic006G055000--Sobic006G260800 Sobic006G055000--Sobic004G298900 Sobic004G268500 Sobic004G268500 Sobic006G055000--Sobic004G268500 Sobic009G062400 Sobic009G062400 Sobic006G055000--Sobic009G062400 Sobic006G101500 Sobic006G101500 Sobic004G211600--Sobic006G101500 Sobic004G211600--Sobic005G063000 Sobic001G183000 Sobic001G183000 Sobic004G211600--Sobic001G183000 Sobic004G211600--Sobic010G214100 Sobic008G006100 Sobic008G006100 Sobic004G211600--Sobic008G006100 Sobic001G134700 Sobic001G134700 Sobic004G211600--Sobic001G134700 Sobic004G211600--Sobic009G062400 Sobic004G211600--Sobic004G298900 Sobic003G160800 Sobic003G160800 Sobic004G211600--Sobic003G160800 Sobic001G037500--Sobic002G042500 Sobic001G054100 Sobic001G054100 Sobic001G037500--Sobic001G054100 Sobic006G273400 Sobic006G273400 Sobic001G037500--Sobic006G273400 Sobic001G037500--Sobic003G150800 Sobic001G037500--Sobic005G111550 Sobic004G206200 Sobic004G206200 Sobic001G037500--Sobic004G206200 Sobic002G081500 Sobic002G081500 Sobic001G037500--Sobic002G081500 Sobic003G372900 Sobic003G372900 Sobic001G037500--Sobic003G372900 Sobic002G296100 Sobic002G296100 Sobic001G037500--Sobic002G296100 Sobic009G140000--Sobic006G260800 Sobic009G140000--Sobic005G001700 Sobic009G140000--Sobic006G055000 Sobic009G140000--Sobic009G062400 Sobic001G517700 Sobic001G517700 Sobic009G140000--Sobic001G517700 Sobic002G403600 Sobic002G403600 Sobic009G140000--Sobic002G403600 Sobic009G123900 Sobic009G123900 Sobic009G140000--Sobic009G123900 Sobic008G052900 Sobic008G052900 Sobic009G140000--Sobic008G052900 Sobic009G219100 Sobic009G219100 Sobic009G140000--Sobic009G219100 Sobic003G037300 Sobic003G037300 Sobic004G298900--Sobic003G037300 Sobic004G298900--Sobic009G062400 Sobic006G258700 Sobic006G258700 Sobic004G298900--Sobic006G258700 Sobic004G298900--Sobic008G006100 Sobic003G014300 Sobic003G014300 Sobic004G298900--Sobic003G014300 Sobic002G102200 Sobic002G102200 Sobic004G298900--Sobic002G102200 Sobic004G298900--Sobic005G111550 Sobic004G151500 Sobic004G151500 Sobic004G298900--Sobic004G151500 Sobic004G298900--Sobic006G260800 Sobic002G049600--Sobic001G073900 Sobic008G033200 Sobic008G033200 Sobic002G049600--Sobic008G033200 Sobic008G117000 Sobic008G117000 Sobic002G049600--Sobic008G117000 Sobic003G036200 Sobic003G036200 Sobic002G049600--Sobic003G036200 Sobic002G049600--Sobic003G332700 Sobic003G426700 Sobic003G426700 Sobic002G049600--Sobic003G426700 Sobic001G261408 Sobic001G261408 Sobic002G049600--Sobic001G261408 Sobic009G242100 Sobic009G242100 Sobic002G049600--Sobic009G242100 Sobic003G342100 Sobic003G342100 Sobic002G049600--Sobic003G342100 Sobic006G280800 Sobic006G280800 Sobic001G001300--Sobic006G280800 Sobic001G001300--Sobic003G085100 Sobic001G001300--Sobic003G160800 Sobic002G133900 Sobic002G133900 Sobic001G001300--Sobic002G133900 Sobic009G148500 Sobic009G148500 Sobic001G001300--Sobic009G148500 Sobic001G001300--Sobic005G111550 Sobic003G287900 Sobic003G287900 Sobic001G001300--Sobic003G287900 Sobic001G500600 Sobic001G500600 Sobic001G001300--Sobic001G500600 Sobic001G001300--Sobic001G134700
Octagon: transcription factors


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