Gene annotation
Transcriptome id Sobic.009G069500.1,Sobic.009G069500.2
Synonym AHP4, Sb09g005800
Functional annotation histidine-containing phosphotransfer protein 4, putative, expressed
UniProt A0A1Z5R1A9 , C5YU97
Pfam PF01627
Panther DB PTHR28242 PTHR28242:SF11
NCBI CDD KOG4747; Two-component phosphorelay intermediate involved in MAP kinase cascade regulation
KEGG Orthology K14490; histidine-containing phosphotransfer peotein
Gene Ontology GO:0004871; obsolete signal transducer activity GO:0000160phosphorelay signal transduction system


Orthologs (automatic annotation)
TAIR AT3G16360 : HPT phosphotransmitter 4
RAP-DB (Rice) LOC_Os05g09410.1 : histidine-containing phosphotransfer protein 4, putative, expressed
MaizeGDB (Corn) Zm00025a043090
Brachypodium KQK07162
Barley HORVU1Hr1G027980.15 , HORVU1Hr1G027980.33 , HORVU1Hr1G027980.32 , HORVU1Hr1G027980.31 , HORVU1Hr1G027980.30 , HORVU1Hr1G027980.37 , HORVU1Hr1G027980.36 , HORVU1Hr1G027980.35 , HORVU1Hr1G027980.34 , HORVU1Hr1G027980.38 , HORVU1Hr1G027980.16 , HORVU1Hr1G027980.20 , HORVU1Hr1G027980.21 , HORVU1Hr1G027980.22 , HORVU1Hr1G027980.23 , HORVU1Hr1G027980.24 , HORVU1Hr1G027980.25 , HORVU1Hr1G027980.26 , HORVU1Hr1G027980.27 , HORVU1Hr1G027980.28 , HORVU1Hr1G027980.29 , HORVU1Hr1G027980.1 , HORVU1Hr1G027980.3 , HORVU1Hr1G027980.2 , HORVU1Hr1G027980.5 , HORVU1Hr1G027980.4 , HORVU1Hr1G027980.7 , HORVU1Hr1G027980.6 , HORVU1Hr1G027980.9 , HORVU1Hr1G027980.8 , HORVU1Hr1G027980.14 , HORVU1Hr1G027980.17 , HORVU1Hr1G027980.11 , HORVU1Hr1G027980.10 , HORVU1Hr1G027980.13 , HORVU1Hr1G027980.12 , HORVU1Hr1G027980.19 , HORVU1Hr1G027980.18
Wheat TraesCS1D02G123300 , TraesCS1D02G123300 , TraesCS1B02G141500 , TraesCS1A02G122300 , TraesCS1A02G122300
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G093500 expressed protein -
2 Sobic.005G039600 -(PubMedID : 26465154)@expressed protein -
3 Sobic.006G162200 NDH-M H PLASTOQUINONE DEHY, putative, expressed -
4 Sobic.001G000800 -(PubMedID : 26976818)@oxidoreductase/ transition metal ion binding protein, putative, expressed -
5 Sobic.005G013800 WRKY104, expressed -
6 Sobic.003G235500 expressed protein -
7 Sobic.006G101600 photoperiodic flowering time gene(PubMedID : 22394582)@FAD binding domain of DNA photolyase domain containing protein, expressed K12118: cryptochrome 1
8 Sobic.002G328800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@TKL_IRAK_DUF26-lc.13 - DUF26 kinases have homology to DUF26 containing loci, expressed -
9 Sobic.004G353700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
10 Sobic.008G065000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@thylakoid lumenal 29.8 kDa protein, putative, expressed -
11 Sobic.001G536901 - -
12 Sobic.007G189700 - -
13 Sobic.003G347520 - -
14 Sobic.001G520800 expressed protein -
15 Sobic.005G030500 OsRR10 type-A response regulator, expressed K14492: two-component response regulator ARR-A family
16 Sobic.010G030800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@zinc finger family protein, putative, expressed -
17 Sobic.006G244000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@sulfate transporter, putative, expressed K17471: sulfate transporter 3
18 Sobic.003G234200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@carbonic anhydrase(PubMedID : 26904072)@-(PubMedID : 26976818)@carbonic anhydrase, chloroplast precursor, putative, expressed K01673: cynT, carbonic anhydrase
19 Sobic.001G540300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
20 Sobic.008G026800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@BTBN22 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with non-phototropic hypocotyl 3 NPH3 and coiled-coil domains, expressed -


Gene co-expression network
sample Sobic009G069500 Sobic009G069500 Sobic001G093500 Sobic001G093500 Sobic009G069500--Sobic001G093500 Sobic005G039600 Sobic005G039600 Sobic009G069500--Sobic005G039600 Sobic006G162200 Sobic006G162200 Sobic009G069500--Sobic006G162200 Sobic001G000800 Sobic001G000800 Sobic009G069500--Sobic001G000800 Sobic005G013800 Sobic005G013800 Sobic009G069500--Sobic005G013800 Sobic003G235500 Sobic003G235500 Sobic009G069500--Sobic003G235500 Sobic006G101600 Sobic006G101600 Sobic009G069500--Sobic006G101600 Sobic002G328800 Sobic002G328800 Sobic009G069500--Sobic002G328800 Sobic004G353700 Sobic004G353700 Sobic009G069500--Sobic004G353700 Sobic001G093500--Sobic006G162200 Sobic005G165500 Sobic005G165500 Sobic001G093500--Sobic005G165500 Sobic001G093500--Sobic005G039600 Sobic008G065000 Sobic008G065000 Sobic001G093500--Sobic008G065000 Sobic001G536901 Sobic001G536901 Sobic001G093500--Sobic001G536901 Sobic006G272900 Sobic006G272900 Sobic001G093500--Sobic006G272900 Sobic007G034300 Sobic007G034300 Sobic001G093500--Sobic007G034300 Sobic004G305800 Sobic004G305800 Sobic001G093500--Sobic004G305800 Sobic010G201700 Sobic010G201700 Sobic001G093500--Sobic010G201700 Sobic001G520800 Sobic001G520800 Sobic005G039600--Sobic001G520800 Sobic005G039600--Sobic007G034300 Sobic003G199800 Sobic003G199800 Sobic005G039600--Sobic003G199800 Sobic003G310400 Sobic003G310400 Sobic005G039600--Sobic003G310400 Sobic003G231800 Sobic003G231800 Sobic005G039600--Sobic003G231800 Sobic003G431900 Sobic003G431900 Sobic005G039600--Sobic003G431900 Sobic009G244300 Sobic009G244300 Sobic005G039600--Sobic009G244300 Sobic004G035500 Sobic004G035500 Sobic005G039600--Sobic004G035500 Sobic005G030500 Sobic005G030500 Sobic005G039600--Sobic005G030500 Sobic009G191300 Sobic009G191300 Sobic006G162200--Sobic009G191300 Sobic006G162200--Sobic005G039600 Sobic003G230400 Sobic003G230400 Sobic006G162200--Sobic003G230400 Sobic006G162200--Sobic004G035500 Sobic003G359100 Sobic003G359100 Sobic006G162200--Sobic003G359100 Sobic006G162200--Sobic001G520800 Sobic010G042400 Sobic010G042400 Sobic006G162200--Sobic010G042400 Sobic001G417200 Sobic001G417200 Sobic006G162200--Sobic001G417200 Sobic008G053200 Sobic008G053200 Sobic006G162200--Sobic008G053200 Sobic001G000800--Sobic008G065000 Sobic004G165700 Sobic004G165700 Sobic001G000800--Sobic004G165700 Sobic003G408000 Sobic003G408000 Sobic001G000800--Sobic003G408000 Sobic008G073100 Sobic008G073100 Sobic001G000800--Sobic008G073100 Sobic003G301300 Sobic003G301300 Sobic001G000800--Sobic003G301300 Sobic004G353100 Sobic004G353100 Sobic001G000800--Sobic004G353100 Sobic001G000800--Sobic001G093500 Sobic003G077400 Sobic003G077400 Sobic001G000800--Sobic003G077400 Sobic002G405100 Sobic002G405100 Sobic001G000800--Sobic002G405100 Sobic002G156700 Sobic002G156700 Sobic005G013800--Sobic002G156700 Sobic007G201300 Sobic007G201300 Sobic005G013800--Sobic007G201300 Sobic001G539760 Sobic001G539760 Sobic005G013800--Sobic001G539760 Sobic003G008100 Sobic003G008100 Sobic005G013800--Sobic003G008100 Sobic003G320400 Sobic003G320400 Sobic005G013800--Sobic003G320400 Sobic002G237600 Sobic002G237600 Sobic005G013800--Sobic002G237600 Sobic002G227800 Sobic002G227800 Sobic005G013800--Sobic002G227800 Sobic005G114000 Sobic005G114000 Sobic005G013800--Sobic005G114000 Sobic010G103300 Sobic010G103300 Sobic005G013800--Sobic010G103300 Sobic010G030800 Sobic010G030800 Sobic003G235500--Sobic010G030800 Sobic003G235500--Sobic003G231800 Sobic007G189700 Sobic007G189700 Sobic003G235500--Sobic007G189700 Sobic010G183100 Sobic010G183100 Sobic003G235500--Sobic010G183100 Sobic003G036100 Sobic003G036100 Sobic003G235500--Sobic003G036100 Sobic009G254600 Sobic009G254600 Sobic003G235500--Sobic009G254600 Sobic001G189100 Sobic001G189100 Sobic003G235500--Sobic001G189100 Sobic001G406000 Sobic001G406000 Sobic003G235500--Sobic001G406000 Sobic003G137200 Sobic003G137200 Sobic006G101600--Sobic003G137200 Sobic003G133700 Sobic003G133700 Sobic006G101600--Sobic003G133700 Sobic003G347520 Sobic003G347520 Sobic006G101600--Sobic003G347520 Sobic003G365200 Sobic003G365200 Sobic006G101600--Sobic003G365200 Sobic008G192900 Sobic008G192900 Sobic006G101600--Sobic008G192900 Sobic001G010900 Sobic001G010900 Sobic006G101600--Sobic001G010900 Sobic006G074500 Sobic006G074500 Sobic006G101600--Sobic006G074500 Sobic003G050800 Sobic003G050800 Sobic006G101600--Sobic003G050800 Sobic003G001650 Sobic003G001650 Sobic006G101600--Sobic003G001650 Sobic010G276400 Sobic010G276400 Sobic002G328800--Sobic010G276400 Sobic010G109500 Sobic010G109500 Sobic002G328800--Sobic010G109500 Sobic006G234100 Sobic006G234100 Sobic002G328800--Sobic006G234100 Sobic001G448400 Sobic001G448400 Sobic002G328800--Sobic001G448400 Sobic004G343300 Sobic004G343300 Sobic002G328800--Sobic004G343300 Sobic003G052500 Sobic003G052500 Sobic002G328800--Sobic003G052500 Sobic010G241000 Sobic010G241000 Sobic002G328800--Sobic010G241000 Sobic002G339200 Sobic002G339200 Sobic002G328800--Sobic002G339200 Sobic003G209800 Sobic003G209800 Sobic002G328800--Sobic003G209800 Sobic003G234400 Sobic003G234400 Sobic004G353700--Sobic003G234400 Sobic004G353700--Sobic003G036100 Sobic004G353700--Sobic007G189700 Sobic004G353700--Sobic010G030800 Sobic004G353700--Sobic001G406000 Sobic009G222200 Sobic009G222200 Sobic004G353700--Sobic009G222200 Sobic002G214300 Sobic002G214300 Sobic004G353700--Sobic002G214300 Sobic005G202600 Sobic005G202600 Sobic004G353700--Sobic005G202600 Sobic001G111700 Sobic001G111700 Sobic004G353700--Sobic001G111700
Octagon: transcription factors


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