Gene annotation
Transcriptome id Sobic.007G057201.1
Synonym -
Functional annotation -
UniProt A0A1Z5R954
Pfam PF04759
Panther DB PTHR31696 PTHR31696:SF24
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G21990 : Protein of unknown function, DUF617
RAP-DB (Rice) LOC_Os08g07500.1 : DUF617 domain containing protein, expressed
MaizeGDB (Corn) Zm00025a030032
Brachypodium KQJ95214
Barley HORVU1Hr1G090350.2 , HORVU1Hr1G090350.3 , HORVU1Hr1G090350.1 , HORVU0Hr1G005690.1 , HORVU0Hr1G014500.2 , HORVU0Hr1G014500.3 , HORVU0Hr1G014500.1 , HORVU0Hr1G014500.4
Wheat -
Populus -


JBrowse

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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G049701 - -
2 Sobic.008G145500 - -
3 Sobic.008G180600 pre-rRNA-processing protein TSR2, putative, expressed K14800: pre-rRNA-processing protein TSR2
4 Sobic.002G255800 expressed protein -
5 Sobic.008G188950 - -
6 Sobic.004G136400 protein phosphatase 2C, putative, expressed -
7 Sobic.001G024100 heat shock protein DnaJ, putative, expressed -
8 Sobic.003G317000 BTBN12 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with non-phototropic hypocotyl 3 NPH3 and coiled-coil domains, expressed -
9 Sobic.007G102900 - -
10 Sobic.003G254200 ATROPGEF7/ROPGEF7, putative, expressed -
11 Sobic.002G295300 expressed protein -
12 Sobic.002G217800 OsFBLD9 - F-box, LRR and FBD domain containing protein, expressed -
13 Sobic.009G062600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@phospholipase D, putative, expressed K01115: phospholipase D1/2
14 Sobic.001G386900 pyruvate kinase, putative, expressed K00873: PK, pyruvate kinase
15 Sobic.001G002400 OsSub55 - Putative Subtilisin homologue, expressed -
16 Sobic.009G249400 protein kinase family protein, putative, expressed -
17 Sobic.006G232700 BTBN12 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with non-phototropic hypocotyl 3 NPH3 and coiled-coil domains, expressed -
18 Sobic.003G305500 expressed protein -
19 Sobic.005G077600 OsFBO22 - F-box and other domain containing protein, expressed -
20 Sobic.010G074000 expressed protein -


Gene co-expression network
sample Sobic007G057201 Sobic007G057201 Sobic009G049701 Sobic009G049701 Sobic007G057201--Sobic009G049701 Sobic008G145500 Sobic008G145500 Sobic007G057201--Sobic008G145500 Sobic008G180600 Sobic008G180600 Sobic007G057201--Sobic008G180600 Sobic002G255800 Sobic002G255800 Sobic007G057201--Sobic002G255800 Sobic008G188950 Sobic008G188950 Sobic007G057201--Sobic008G188950 Sobic004G136400 Sobic004G136400 Sobic007G057201--Sobic004G136400 Sobic001G024100 Sobic001G024100 Sobic007G057201--Sobic001G024100 Sobic003G317000 Sobic003G317000 Sobic007G057201--Sobic003G317000 Sobic007G102900 Sobic007G102900 Sobic007G057201--Sobic007G102900 Sobic009G049701--Sobic007G057201 Sobic003G065700 Sobic003G065700 Sobic009G049701--Sobic003G065700 Sobic009G049701--Sobic008G145500 Sobic005G078000 Sobic005G078000 Sobic009G049701--Sobic005G078000 Sobic009G049701--Sobic004G136400 Sobic009G049701--Sobic008G180600 Sobic009G049701--Sobic001G024100 Sobic009G049701--Sobic003G317000 Sobic005G077600 Sobic005G077600 Sobic009G049701--Sobic005G077600 Sobic008G145500--Sobic007G102900 Sobic001G386900 Sobic001G386900 Sobic008G145500--Sobic001G386900 Sobic008G145500--Sobic003G317000 Sobic002G295300 Sobic002G295300 Sobic008G145500--Sobic002G295300 Sobic009G062600 Sobic009G062600 Sobic008G145500--Sobic009G062600 Sobic003G305500 Sobic003G305500 Sobic008G145500--Sobic003G305500 Sobic001G435300 Sobic001G435300 Sobic008G145500--Sobic001G435300 Sobic003G208900 Sobic003G208900 Sobic008G145500--Sobic003G208900 Sobic001G002400 Sobic001G002400 Sobic008G145500--Sobic001G002400 Sobic008G180600--Sobic002G255800 Sobic008G180600--Sobic007G057201 Sobic008G180600--Sobic009G049701 Sobic008G180600--Sobic008G188950 Sobic003G048300 Sobic003G048300 Sobic008G180600--Sobic003G048300 Sobic004G355900 Sobic004G355900 Sobic008G180600--Sobic004G355900 Sobic008G180600--Sobic004G136400 Sobic008G180600--Sobic003G065700 Sobic008G180600--Sobic008G145500 Sobic002G255800--Sobic008G180600 Sobic002G255800--Sobic008G188950 Sobic002G255800--Sobic007G057201 Sobic002G255800--Sobic003G048300 Sobic001G486800 Sobic001G486800 Sobic002G255800--Sobic001G486800 Sobic002G255800--Sobic009G049701 Sobic003G224800 Sobic003G224800 Sobic002G255800--Sobic003G224800 Sobic002G255800--Sobic008G145500 Sobic002G255800--Sobic001G024100 Sobic008G188950--Sobic002G255800 Sobic008G188950--Sobic007G057201 Sobic008G188950--Sobic003G048300 Sobic008G188950--Sobic008G180600 Sobic008G188950--Sobic003G224800 Sobic008G188950--Sobic009G049701 Sobic008G188950--Sobic003G065700 Sobic008G188950--Sobic008G145500 Sobic008G188950--Sobic001G024100 Sobic004G136400--Sobic004G355900 Sobic004G014900 Sobic004G014900 Sobic004G136400--Sobic004G014900 Sobic003G254200 Sobic003G254200 Sobic004G136400--Sobic003G254200 Sobic004G255100 Sobic004G255100 Sobic004G136400--Sobic004G255100 Sobic008G052800 Sobic008G052800 Sobic004G136400--Sobic008G052800 Sobic001G003400 Sobic001G003400 Sobic004G136400--Sobic001G003400 Sobic004G136400--Sobic007G057201 Sobic010G187800 Sobic010G187800 Sobic004G136400--Sobic010G187800 Sobic004G123100 Sobic004G123100 Sobic004G136400--Sobic004G123100 Sobic001G024100--Sobic002G295300 Sobic001G024100--Sobic008G145500 Sobic001G024100--Sobic001G386900 Sobic001G024100--Sobic001G435300 Sobic002G070100 Sobic002G070100 Sobic001G024100--Sobic002G070100 Sobic005G058600 Sobic005G058600 Sobic001G024100--Sobic005G058600 Sobic002G402900 Sobic002G402900 Sobic001G024100--Sobic002G402900 Sobic008G169101 Sobic008G169101 Sobic001G024100--Sobic008G169101 Sobic001G024100--Sobic007G102900 Sobic001G196400 Sobic001G196400 Sobic003G317000--Sobic001G196400 Sobic003G317000--Sobic003G305500 Sobic003G317000--Sobic009G062600 Sobic003G317000--Sobic003G208900 Sobic003G317000--Sobic001G002400 Sobic003G343000 Sobic003G343000 Sobic003G317000--Sobic003G343000 Sobic006G164800 Sobic006G164800 Sobic003G317000--Sobic006G164800 Sobic006G232700 Sobic006G232700 Sobic003G317000--Sobic006G232700 Sobic004G042800 Sobic004G042800 Sobic003G317000--Sobic004G042800 Sobic003G250160 Sobic003G250160 Sobic007G102900--Sobic003G250160 Sobic009G177750 Sobic009G177750 Sobic007G102900--Sobic009G177750 Sobic004G049300 Sobic004G049300 Sobic007G102900--Sobic004G049300 Sobic007G081701 Sobic007G081701 Sobic007G102900--Sobic007G081701 Sobic007G102900--Sobic006G164800 Sobic001G197050 Sobic001G197050 Sobic007G102900--Sobic001G197050 Sobic007G102900--Sobic003G305500 Sobic007G102900--Sobic009G062600 Sobic002G066600 Sobic002G066600 Sobic007G102900--Sobic002G066600
Octagon: transcription factors


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