Gene annotation
Transcriptome id Sobic.002G217800.1
Synonym Sb02g025963
Functional annotation OsFBLD9 - F-box, LRR and FBD domain containing protein, expressed
UniProt A0A1B6QCT9
Pfam PF00646
Panther DB PTHR32212 PTHR32212:SF94
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR AT1G13570 : F-box/RNI-like superfamily protein
RAP-DB (Rice) LOC_Os09g27090.1 : OsFBLD9 - F-box, LRR and FBD domain containing protein, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley HORVU5Hr1G061480.2 , HORVU5Hr1G061480.3 , HORVU5Hr1G061480.1
Wheat TraesCS5A02G208500 , TraesCS5A02G208500 , TraesCS5B02G206600
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.008G145500 - -
2 Sobic.002G298201 - K11593: ELF2C, eukaryotic translation initiation factor 2C
3 Sobic.001G386900 pyruvate kinase, putative, expressed K00873: PK, pyruvate kinase
4 Sobic.003G317000 BTBN12 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with non-phototropic hypocotyl 3 NPH3 and coiled-coil domains, expressed -
5 Sobic.007G127800 expressed protein -
6 Sobic.007G161100 ENTH domain containing protein, expressed -
7 Sobic.007G102900 - -
8 Sobic.004G250800 pre-mRNA-processing factor 31, putative, expressed K12844: U4/U6 small nuclear ribonucleoprotein PRP31
9 Sobic.002G295300 expressed protein -
10 Sobic.001G196400 transmembrane and coiled-coil domain-containing protein 4, putative, expressed -
11 Sobic.009G103650 - -
12 Sobic.010G217700 clathrin assembly protein, putative, expressed -
13 Sobic.001G024100 heat shock protein DnaJ, putative, expressed -
14 Sobic.003G305500 expressed protein -
15 Sobic.009G062600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@phospholipase D, putative, expressed K01115: phospholipase D1/2
16 Sobic.008G165401 - -
17 Sobic.004G327000 STE_PAK_Ste20_STLK.2 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed K08835: OXSR1, serine/threonine-protein kinase OSR1/STK39
18 Sobic.009G042800 expressed protein -
19 Sobic.006G115700 WRKY35, expressed K18835: WRKY transcription factor 2
20 Sobic.003G208900 Sad1 / UNC-like C-terminal domain containing protein, putative, expressed -


Gene co-expression network
sample Sobic002G217800 Sobic002G217800 Sobic008G145500 Sobic008G145500 Sobic002G217800--Sobic008G145500 Sobic002G298201 Sobic002G298201 Sobic002G217800--Sobic002G298201 Sobic001G386900 Sobic001G386900 Sobic002G217800--Sobic001G386900 Sobic003G317000 Sobic003G317000 Sobic002G217800--Sobic003G317000 Sobic007G127800 Sobic007G127800 Sobic002G217800--Sobic007G127800 Sobic007G161100 Sobic007G161100 Sobic002G217800--Sobic007G161100 Sobic007G102900 Sobic007G102900 Sobic002G217800--Sobic007G102900 Sobic004G250800 Sobic004G250800 Sobic002G217800--Sobic004G250800 Sobic002G295300 Sobic002G295300 Sobic002G217800--Sobic002G295300 Sobic008G145500--Sobic007G102900 Sobic008G145500--Sobic001G386900 Sobic008G145500--Sobic003G317000 Sobic008G145500--Sobic002G295300 Sobic009G062600 Sobic009G062600 Sobic008G145500--Sobic009G062600 Sobic003G305500 Sobic003G305500 Sobic008G145500--Sobic003G305500 Sobic001G435300 Sobic001G435300 Sobic008G145500--Sobic001G435300 Sobic003G208900 Sobic003G208900 Sobic008G145500--Sobic003G208900 Sobic001G002400 Sobic001G002400 Sobic008G145500--Sobic001G002400 Sobic002G298201--Sobic003G317000 Sobic005G049900 Sobic005G049900 Sobic002G298201--Sobic005G049900 Sobic001G196400 Sobic001G196400 Sobic002G298201--Sobic001G196400 Sobic006G232700 Sobic006G232700 Sobic002G298201--Sobic006G232700 Sobic001G136150 Sobic001G136150 Sobic002G298201--Sobic001G136150 Sobic002G034200 Sobic002G034200 Sobic002G298201--Sobic002G034200 Sobic005G147900 Sobic005G147900 Sobic002G298201--Sobic005G147900 Sobic002G298201--Sobic007G161100 Sobic002G298201--Sobic003G305500 Sobic002G070100 Sobic002G070100 Sobic001G386900--Sobic002G070100 Sobic001G386900--Sobic001G435300 Sobic004G050900 Sobic004G050900 Sobic001G386900--Sobic004G050900 Sobic009G182100 Sobic009G182100 Sobic001G386900--Sobic009G182100 Sobic005G000900 Sobic005G000900 Sobic001G386900--Sobic005G000900 Sobic007G031200 Sobic007G031200 Sobic001G386900--Sobic007G031200 Sobic002G156400 Sobic002G156400 Sobic001G386900--Sobic002G156400 Sobic002G384900 Sobic002G384900 Sobic001G386900--Sobic002G384900 Sobic006G017700 Sobic006G017700 Sobic001G386900--Sobic006G017700 Sobic003G317000--Sobic001G196400 Sobic003G317000--Sobic003G305500 Sobic003G317000--Sobic009G062600 Sobic003G317000--Sobic003G208900 Sobic003G317000--Sobic001G002400 Sobic003G343000 Sobic003G343000 Sobic003G317000--Sobic003G343000 Sobic006G164800 Sobic006G164800 Sobic003G317000--Sobic006G164800 Sobic003G317000--Sobic006G232700 Sobic004G042800 Sobic004G042800 Sobic003G317000--Sobic004G042800 Sobic004G014200 Sobic004G014200 Sobic007G127800--Sobic004G014200 Sobic004G327000 Sobic004G327000 Sobic007G127800--Sobic004G327000 Sobic006G018701 Sobic006G018701 Sobic007G127800--Sobic006G018701 Sobic003G160600 Sobic003G160600 Sobic007G127800--Sobic003G160600 Sobic008G153700 Sobic008G153700 Sobic007G127800--Sobic008G153700 Sobic009G158300 Sobic009G158300 Sobic007G127800--Sobic009G158300 Sobic007G016700 Sobic007G016700 Sobic007G127800--Sobic007G016700 Sobic009G060000 Sobic009G060000 Sobic007G127800--Sobic009G060000 Sobic001G409000 Sobic001G409000 Sobic007G127800--Sobic001G409000 Sobic007G161100--Sobic004G327000 Sobic004G059200 Sobic004G059200 Sobic007G161100--Sobic004G059200 Sobic007G161100--Sobic006G018701 Sobic010G026200 Sobic010G026200 Sobic007G161100--Sobic010G026200 Sobic005G039000 Sobic005G039000 Sobic007G161100--Sobic005G039000 Sobic007G161100--Sobic001G196400 Sobic004G160000 Sobic004G160000 Sobic007G161100--Sobic004G160000 Sobic007G161100--Sobic003G208900 Sobic002G406801 Sobic002G406801 Sobic007G161100--Sobic002G406801 Sobic003G250160 Sobic003G250160 Sobic007G102900--Sobic003G250160 Sobic009G177750 Sobic009G177750 Sobic007G102900--Sobic009G177750 Sobic004G049300 Sobic004G049300 Sobic007G102900--Sobic004G049300 Sobic007G081701 Sobic007G081701 Sobic007G102900--Sobic007G081701 Sobic007G102900--Sobic006G164800 Sobic001G197050 Sobic001G197050 Sobic007G102900--Sobic001G197050 Sobic007G102900--Sobic003G305500 Sobic007G102900--Sobic009G062600 Sobic002G066600 Sobic002G066600 Sobic007G102900--Sobic002G066600 Sobic006G115700 Sobic006G115700 Sobic004G250800--Sobic006G115700 Sobic006G171600 Sobic006G171600 Sobic004G250800--Sobic006G171600 Sobic008G007600 Sobic008G007600 Sobic004G250800--Sobic008G007600 Sobic002G364700 Sobic002G364700 Sobic004G250800--Sobic002G364700 Sobic002G299500 Sobic002G299500 Sobic004G250800--Sobic002G299500 Sobic009G061500 Sobic009G061500 Sobic004G250800--Sobic009G061500 Sobic008G165401 Sobic008G165401 Sobic004G250800--Sobic008G165401 Sobic002G307400 Sobic002G307400 Sobic004G250800--Sobic002G307400 Sobic001G135800 Sobic001G135800 Sobic004G250800--Sobic001G135800 Sobic002G295300--Sobic001G386900 Sobic005G058600 Sobic005G058600 Sobic002G295300--Sobic005G058600 Sobic002G295300--Sobic002G070100 Sobic002G295300--Sobic001G435300 Sobic002G295300--Sobic007G031200 Sobic003G191200 Sobic003G191200 Sobic002G295300--Sobic003G191200 Sobic002G402900 Sobic002G402900 Sobic002G295300--Sobic002G402900 Sobic008G169101 Sobic008G169101 Sobic002G295300--Sobic008G169101 Sobic004G100300 Sobic004G100300 Sobic002G295300--Sobic004G100300
Octagon: transcription factors


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