Gene annotation
Transcriptome id Sobic.007G072300.1
Synonym Sb07g005750
Functional annotation OsFBL44 - F-box domain and LRR containing protein, expressed
UniProt C5YIG3
Pfam -
Panther DB PTHR32212 PTHR32212:SF103
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G58860 : F-box/RNI-like superfamily protein
RAP-DB (Rice) LOC_Os08g09750.1 : OsFBL44 - F-box domain and LRR containing protein, expressed
MaizeGDB (Corn) -
Brachypodium PNT74588 , PNT74589 , PNT74587 , KQK14728 , PNT67008
Barley -
Wheat TraesCS2D02G124100 , TraesCS2B02G143200 , TraesCS2B02G142200 , TraesCS2A02G121700 , TraesCS2A02G121500 , TraesCS2B02G142100 , TraesCS2D02G123500 , TraesCSU02G180300 , TraesCSU02G163100 , TraesCSU02G163100 , TraesCS2D02G124200 , TraesCSU02G192600 , TraesCSU02G192600 , TraesCS2A02G121600
Populus -


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cDNA sequences
Sobic.007G072300


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G081400 expressed protein -
2 Sobic.004G053900 expressed protein -
3 Sobic.002G191000 STE_MEKK_ste11_MAP3K.2 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed -
4 Sobic.010G008900 kinesin motor domain containing protein, expressed K11498: centromeric protein E
5 Sobic.001G105000 basic helix-loop-helix protein, putative, expressed -
6 Sobic.003G118100 EMB3013, putative, expressed K17545: serine/threonine-protein kinase ULK4
7 Sobic.003G043900 kinesin-4, putative, expressed K10406: kinesin family member C2/C3
8 Sobic.003G008700 MYB family transcription factor, putative, expressed -
9 Sobic.006G035600 Kinesin motor domain domain containing protein, expressed K10400: kinesin family member 15
10 Sobic.009G129400 kinesin motor domain containing protein, putative, expressed K10406: kinesin family member C2/C3
11 Sobic.001G491300 tetratricopeptide repeat domain containing protein, expressed -
12 Sobic.008G148000 kinesin motor domain containing protein, putative, expressed K10400: kinesin family member 15
13 Sobic.001G170800 "Transport protein(Ortholog in rice:Huang et al., 2012)"(PubMedID : 31659835)@transport protein-related, putative, expressed -
14 Sobic.001G131300 centromere protein, putative, expressed -
15 Sobic.002G255500 expressed protein -
16 Sobic.001G029800 expressed protein -
17 Sobic.005G230500 SCARECROW, putative, expressed -
18 Sobic.010G017400 DLT(Ortholog in rice:Tong et al. (2012))(PubMedID : 31659927)@DELLA protein SLR1, putative, expressed -
19 Sobic.005G110535 - K02540: DNA replication licensing factor MCM2
20 Sobic.010G051100 OsPDIL1-5 protein disulfide isomerase PDIL1-5, expressed K09580: PDIA1, protein disulfide-isomerase A1


Gene co-expression network
sample Sobic007G072300 Sobic007G072300 Sobic004G081400 Sobic004G081400 Sobic007G072300--Sobic004G081400 Sobic004G053900 Sobic004G053900 Sobic007G072300--Sobic004G053900 Sobic002G191000 Sobic002G191000 Sobic007G072300--Sobic002G191000 Sobic010G008900 Sobic010G008900 Sobic007G072300--Sobic010G008900 Sobic001G105000 Sobic001G105000 Sobic007G072300--Sobic001G105000 Sobic003G118100 Sobic003G118100 Sobic007G072300--Sobic003G118100 Sobic003G043900 Sobic003G043900 Sobic007G072300--Sobic003G043900 Sobic003G008700 Sobic003G008700 Sobic007G072300--Sobic003G008700 Sobic006G035600 Sobic006G035600 Sobic007G072300--Sobic006G035600 Sobic004G081400--Sobic007G072300 Sobic004G081400--Sobic001G105000 Sobic004G081400--Sobic010G008900 Sobic001G029800 Sobic001G029800 Sobic004G081400--Sobic001G029800 Sobic006G278300 Sobic006G278300 Sobic004G081400--Sobic006G278300 Sobic006G126700 Sobic006G126700 Sobic004G081400--Sobic006G126700 Sobic002G308200 Sobic002G308200 Sobic004G081400--Sobic002G308200 Sobic001G301900 Sobic001G301900 Sobic004G081400--Sobic001G301900 Sobic004G064700 Sobic004G064700 Sobic004G081400--Sobic004G064700 Sobic002G113400 Sobic002G113400 Sobic004G053900--Sobic002G113400 Sobic002G297500 Sobic002G297500 Sobic004G053900--Sobic002G297500 Sobic002G290000 Sobic002G290000 Sobic004G053900--Sobic002G290000 Sobic007G125300 Sobic007G125300 Sobic004G053900--Sobic007G125300 Sobic008G148000 Sobic008G148000 Sobic004G053900--Sobic008G148000 Sobic005G110535 Sobic005G110535 Sobic004G053900--Sobic005G110535 Sobic010G051100 Sobic010G051100 Sobic004G053900--Sobic010G051100 Sobic006G179200 Sobic006G179200 Sobic004G053900--Sobic006G179200 Sobic004G328300 Sobic004G328300 Sobic004G053900--Sobic004G328300 Sobic002G191000--Sobic003G118100 Sobic002G191000--Sobic006G035600 Sobic002G191000--Sobic010G051100 Sobic002G191000--Sobic001G029800 Sobic002G191000--Sobic010G008900 Sobic001G070300 Sobic001G070300 Sobic002G191000--Sobic001G070300 Sobic010G274000 Sobic010G274000 Sobic002G191000--Sobic010G274000 Sobic004G271500 Sobic004G271500 Sobic002G191000--Sobic004G271500 Sobic009G181500 Sobic009G181500 Sobic002G191000--Sobic009G181500 Sobic005G000500 Sobic005G000500 Sobic010G008900--Sobic005G000500 Sobic003G314900 Sobic003G314900 Sobic010G008900--Sobic003G314900 Sobic001G170800 Sobic001G170800 Sobic010G008900--Sobic001G170800 Sobic007G168900 Sobic007G168900 Sobic010G008900--Sobic007G168900 Sobic010G008900--Sobic001G029800 Sobic001G177900 Sobic001G177900 Sobic010G008900--Sobic001G177900 Sobic003G294500 Sobic003G294500 Sobic010G008900--Sobic003G294500 Sobic004G271300 Sobic004G271300 Sobic010G008900--Sobic004G271300 Sobic010G008900--Sobic008G148000 Sobic010G254700 Sobic010G254700 Sobic001G105000--Sobic010G254700 Sobic003G055400 Sobic003G055400 Sobic001G105000--Sobic003G055400 Sobic002G403700 Sobic002G403700 Sobic001G105000--Sobic002G403700 Sobic004G037100 Sobic004G037100 Sobic001G105000--Sobic004G037100 Sobic006G108500 Sobic006G108500 Sobic001G105000--Sobic006G108500 Sobic002G325500 Sobic002G325500 Sobic001G105000--Sobic002G325500 Sobic001G105000--Sobic004G064700 Sobic003G409500 Sobic003G409500 Sobic001G105000--Sobic003G409500 SobicK010100 SobicK010100 Sobic001G105000--SobicK010100 Sobic003G118100--Sobic006G035600 Sobic003G118100--Sobic002G191000 Sobic003G118100--Sobic010G008900 Sobic003G118100--Sobic008G148000 Sobic003G118100--Sobic005G000500 Sobic003G118100--Sobic007G125300 Sobic001G131300 Sobic001G131300 Sobic003G118100--Sobic001G131300 Sobic003G118100--Sobic003G294500 Sobic003G118100--Sobic001G029800 Sobic001G109700 Sobic001G109700 Sobic003G043900--Sobic001G109700 Sobic002G296000 Sobic002G296000 Sobic003G043900--Sobic002G296000 Sobic003G043900--Sobic007G125300 Sobic001G304800 Sobic001G304800 Sobic003G043900--Sobic001G304800 Sobic003G043900--Sobic005G110535 Sobic009G146250 Sobic009G146250 Sobic003G043900--Sobic009G146250 Sobic003G043900--Sobic003G008700 Sobic004G156200 Sobic004G156200 Sobic003G043900--Sobic004G156200 Sobic009G101100 Sobic009G101100 Sobic003G043900--Sobic009G101100 Sobic003G008700--Sobic001G170800 Sobic004G047100 Sobic004G047100 Sobic003G008700--Sobic004G047100 Sobic009G184200 Sobic009G184200 Sobic003G008700--Sobic009G184200 Sobic003G008700--Sobic005G000500 Sobic003G008700--Sobic005G110535 Sobic010G105400 Sobic010G105400 Sobic003G008700--Sobic010G105400 Sobic003G008700--Sobic008G148000 Sobic003G444100 Sobic003G444100 Sobic003G008700--Sobic003G444100 Sobic001G398400 Sobic001G398400 Sobic003G008700--Sobic001G398400 Sobic006G035600--Sobic003G118100 Sobic006G035600--Sobic001G131300 Sobic006G035600--Sobic002G191000 Sobic006G035600--Sobic009G181500 Sobic006G035600--Sobic010G008900 Sobic006G035600--Sobic005G000500 Sobic006G035600--Sobic003G294500 Sobic006G035600--Sobic010G051100 Sobic006G035600--Sobic008G148000
Octagon: transcription factors


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