Gene annotation
Transcriptome id Sobic.007G107900.2
Synonym
Functional annotation expressed protein
UniProt A0A1Z5RA50
Pfam -
Panther DB PTHR34542 PTHR34542:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G66890 : -
RAP-DB (Rice) LOC_Os08g27100.1 : expressed protein
MaizeGDB (Corn) Zm00025a029845 , Zm00025a006185
Brachypodium KQJ96250
Barley HORVU3Hr1G089350.1
Wheat -
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G382400 - -
2 Sobic.003G201800 coiled-coil domain-containing protein, putative, expressed -
3 Sobic.003G364550 - -
4 Sobic.003G056900 expressed protein -
5 Sobic.003G091900 - -
6 Sobic.007G165100 "domain confirmed by Pfam database, expressed in leaf and root, expression induced by IAA treatment"(PubMedID : 20499123)@DUF260 domain containing protein, putative, expressed -
7 Sobic.003G034100 expressed protein -
8 Sobic.001G062000 - -
9 Sobic.003G236501 - -
10 Sobic.005G135300 chalcone and stilbene synthases, putative, expressed -
11 Sobic.002G296800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@cell cycle control protein, putative, expressed -
12 Sobic.010G120350 - -
13 Sobic.003G078700 lipid phosphatase protein, putative, expressed -
14 Sobic.010G213100 RNA-dependent RNA polymerase, putative, expressed K11699: RDR, RNA-dependent RNA polymerase
15 Sobic.009G069400 - -
16 Sobic.002G091500 hydrolase, alpha/beta fold family domain containing protein, expressed -
17 Sobic.001G336600 COBRA-like protein precursor, putative, expressed -
18 Sobic.004G231100 expressed protein -
19 Sobic.004G045900 phytosulfokine receptor precursor, putative, expressed -
20 Sobic.001G439050 - -


Gene co-expression network
sample Sobic007G107900 Sobic007G107900 Sobic002G382400 Sobic002G382400 Sobic007G107900--Sobic002G382400 Sobic003G201800 Sobic003G201800 Sobic007G107900--Sobic003G201800 Sobic003G364550 Sobic003G364550 Sobic007G107900--Sobic003G364550 Sobic003G056900 Sobic003G056900 Sobic007G107900--Sobic003G056900 Sobic003G091900 Sobic003G091900 Sobic007G107900--Sobic003G091900 Sobic007G165100 Sobic007G165100 Sobic007G107900--Sobic007G165100 Sobic003G034100 Sobic003G034100 Sobic007G107900--Sobic003G034100 Sobic001G062000 Sobic001G062000 Sobic007G107900--Sobic001G062000 Sobic003G236501 Sobic003G236501 Sobic007G107900--Sobic003G236501 Sobic002G382400--Sobic003G201800 Sobic001G439050 Sobic001G439050 Sobic002G382400--Sobic001G439050 Sobic010G120350 Sobic010G120350 Sobic002G382400--Sobic010G120350 Sobic004G319500 Sobic004G319500 Sobic002G382400--Sobic004G319500 Sobic002G382400--Sobic003G236501 Sobic002G382400--Sobic007G107900 Sobic002G382400--Sobic003G056900 Sobic006G082100 Sobic006G082100 Sobic002G382400--Sobic006G082100 Sobic006G001600 Sobic006G001600 Sobic002G382400--Sobic006G001600 Sobic003G201800--Sobic002G382400 Sobic003G201800--Sobic010G120350 Sobic002G249400 Sobic002G249400 Sobic003G201800--Sobic002G249400 Sobic010G025200 Sobic010G025200 Sobic003G201800--Sobic010G025200 Sobic001G223000 Sobic001G223000 Sobic003G201800--Sobic001G223000 Sobic003G201800--Sobic004G319500 Sobic003G201800--Sobic006G001600 Sobic003G201800--Sobic003G056900 Sobic007G180800 Sobic007G180800 Sobic003G201800--Sobic007G180800 Sobic001G336600 Sobic001G336600 Sobic003G364550--Sobic001G336600 Sobic005G135300 Sobic005G135300 Sobic003G364550--Sobic005G135300 Sobic005G068400 Sobic005G068400 Sobic003G364550--Sobic005G068400 Sobic008G131601 Sobic008G131601 Sobic003G364550--Sobic008G131601 Sobic002G051500 Sobic002G051500 Sobic003G364550--Sobic002G051500 Sobic006G088450 Sobic006G088450 Sobic003G364550--Sobic006G088450 Sobic002G288500 Sobic002G288500 Sobic003G364550--Sobic002G288500 Sobic002G296800 Sobic002G296800 Sobic003G364550--Sobic002G296800 Sobic003G364550--Sobic010G025200 Sobic003G056900--Sobic003G091900 Sobic001G080500 Sobic001G080500 Sobic003G056900--Sobic001G080500 Sobic002G377400 Sobic002G377400 Sobic003G056900--Sobic002G377400 Sobic003G056900--Sobic003G201800 Sobic003G243750 Sobic003G243750 Sobic003G056900--Sobic003G243750 Sobic003G056900--Sobic002G382400 Sobic007G185000 Sobic007G185000 Sobic003G056900--Sobic007G185000 Sobic003G056900--Sobic001G062000 Sobic010G213100 Sobic010G213100 Sobic003G056900--Sobic010G213100 Sobic003G091900--Sobic010G213100 Sobic007G182400 Sobic007G182400 Sobic003G091900--Sobic007G182400 Sobic009G047033 Sobic009G047033 Sobic003G091900--Sobic009G047033 Sobic003G091900--Sobic001G062000 Sobic003G091900--Sobic003G056900 Sobic010G054400 Sobic010G054400 Sobic003G091900--Sobic010G054400 Sobic003G091900--Sobic002G377400 Sobic003G336600 Sobic003G336600 Sobic003G091900--Sobic003G336600 Sobic003G091900--Sobic007G185000 Sobic003G130650 Sobic003G130650 Sobic007G165100--Sobic003G130650 Sobic007G165100--Sobic007G185000 Sobic001G082700 Sobic001G082700 Sobic007G165100--Sobic001G082700 Sobic005G038700 Sobic005G038700 Sobic007G165100--Sobic005G038700 Sobic008G159800 Sobic008G159800 Sobic007G165100--Sobic008G159800 Sobic007G165100--Sobic003G243750 Sobic007G165100--Sobic002G377400 Sobic009G203600 Sobic009G203600 Sobic007G165100--Sobic009G203600 Sobic007G165100--Sobic003G091900 Sobic003G034100--Sobic002G051500 Sobic008G037600 Sobic008G037600 Sobic003G034100--Sobic008G037600 Sobic003G034100--Sobic005G068400 Sobic010G249600 Sobic010G249600 Sobic003G034100--Sobic010G249600 Sobic003G034100--Sobic002G296800 Sobic007G210200 Sobic007G210200 Sobic003G034100--Sobic007G210200 Sobic003G034100--Sobic007G107900 Sobic003G034100--Sobic005G135300 Sobic009G240300 Sobic009G240300 Sobic003G034100--Sobic009G240300 Sobic001G062000--Sobic007G182400 Sobic001G062000--Sobic010G054400 Sobic001G062000--Sobic003G091900 Sobic001G062000--Sobic010G213100 Sobic004G343733 Sobic004G343733 Sobic001G062000--Sobic004G343733 Sobic009G079700 Sobic009G079700 Sobic001G062000--Sobic009G079700 Sobic001G062000--Sobic002G377400 Sobic001G529301 Sobic001G529301 Sobic001G062000--Sobic001G529301 Sobic001G062000--Sobic003G056900 Sobic003G125801 Sobic003G125801 Sobic003G236501--Sobic003G125801 Sobic003G236501--Sobic002G382400 Sobic003G236501--Sobic010G120350 Sobic008G137200 Sobic008G137200 Sobic003G236501--Sobic008G137200 Sobic004G231100 Sobic004G231100 Sobic003G236501--Sobic004G231100 Sobic003G433000 Sobic003G433000 Sobic003G236501--Sobic003G433000 Sobic003G236501--Sobic006G082100 Sobic001G244650 Sobic001G244650 Sobic003G236501--Sobic001G244650 Sobic005G165032 Sobic005G165032 Sobic003G236501--Sobic005G165032
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.