Gene annotation
Transcriptome id Sobic.003G034100.1
Synonym Sb03g003090
Functional annotation expressed protein
UniProt C5XLY5
Pfam -
Panther DB PTHR35992
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G19980 : cytomatrix protein-related
RAP-DB (Rice) LOC_Os04g02680.1 : expressed protein
MaizeGDB (Corn) Zm00025a023037
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G051500 expressed protein -
2 Sobic.008G037600 OsFBDUF60 - F-box and DUF domain containing protein, expressed -
3 Sobic.005G068400 - -
4 Sobic.010G249600 macrophage migration inhibitory factor, putative, expressed -
5 Sobic.002G296800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@cell cycle control protein, putative, expressed -
6 Sobic.007G210200 Highest expression level in seeds(PubMedID : 27501690)@OsSPL14 - SBP-box gene family member, expressed -
7 Sobic.007G107900 expressed protein -
8 Sobic.005G135300 chalcone and stilbene synthases, putative, expressed -
9 Sobic.009G240300 chloroplast unusual positioning protein, putative, expressed -
10 Sobic.007G226000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@2-aminoethanethiol dioxygenase, putative, expressed K10712: cysteamine dioxygenase
11 Sobic.002G288500 serine/threonine kinase, putative, expressed -
12 Sobic.003G364550 - -
13 Sobic.003G308900 expressed protein -
14 Sobic.003G078700 lipid phosphatase protein, putative, expressed -
15 Sobic.006G088450 - -
16 Sobic.004G295900 cell division cycle protein 23, putative, expressed K03355: APC8, anaphase-promoting complex subunit 8
17 Sobic.007G185000 leucine rich repeat protein, putative, expressed -
18 Sobic.003G035200 profilin domain containing protein, expressed -
19 Sobic.004G224000 - -
20 Sobic.003G315000 homeobox-leucine zipper protein ATHB-54, putative, expressed -


Gene co-expression network
sample Sobic003G034100 Sobic003G034100 Sobic002G051500 Sobic002G051500 Sobic003G034100--Sobic002G051500 Sobic008G037600 Sobic008G037600 Sobic003G034100--Sobic008G037600 Sobic005G068400 Sobic005G068400 Sobic003G034100--Sobic005G068400 Sobic010G249600 Sobic010G249600 Sobic003G034100--Sobic010G249600 Sobic002G296800 Sobic002G296800 Sobic003G034100--Sobic002G296800 Sobic007G210200 Sobic007G210200 Sobic003G034100--Sobic007G210200 Sobic007G107900 Sobic007G107900 Sobic003G034100--Sobic007G107900 Sobic005G135300 Sobic005G135300 Sobic003G034100--Sobic005G135300 Sobic009G240300 Sobic009G240300 Sobic003G034100--Sobic009G240300 Sobic002G051500--Sobic005G068400 Sobic003G364550 Sobic003G364550 Sobic002G051500--Sobic003G364550 Sobic006G088450 Sobic006G088450 Sobic002G051500--Sobic006G088450 Sobic002G051500--Sobic005G135300 Sobic002G288500 Sobic002G288500 Sobic002G051500--Sobic002G288500 Sobic003G035200 Sobic003G035200 Sobic002G051500--Sobic003G035200 Sobic008G131601 Sobic008G131601 Sobic002G051500--Sobic008G131601 Sobic007G072200 Sobic007G072200 Sobic002G051500--Sobic007G072200 Sobic002G051500--Sobic009G240300 Sobic008G037600--Sobic003G034100 Sobic008G037600--Sobic003G035200 Sobic003G308900 Sobic003G308900 Sobic008G037600--Sobic003G308900 Sobic008G037600--Sobic009G240300 Sobic008G037600--Sobic007G107900 Sobic008G037600--Sobic002G296800 Sobic004G045900 Sobic004G045900 Sobic008G037600--Sobic004G045900 Sobic008G037600--Sobic005G068400 Sobic004G343733 Sobic004G343733 Sobic008G037600--Sobic004G343733 Sobic005G068400--Sobic006G088450 Sobic005G068400--Sobic005G135300 Sobic005G068400--Sobic002G288500 Sobic005G068400--Sobic008G131601 Sobic005G068400--Sobic002G051500 Sobic005G068400--Sobic003G364550 Sobic001G336600 Sobic001G336600 Sobic005G068400--Sobic001G336600 Sobic004G295900 Sobic004G295900 Sobic005G068400--Sobic004G295900 Sobic003G352750 Sobic003G352750 Sobic005G068400--Sobic003G352750 Sobic003G440500 Sobic003G440500 Sobic010G249600--Sobic003G440500 Sobic002G398600 Sobic002G398600 Sobic010G249600--Sobic002G398600 Sobic002G377400 Sobic002G377400 Sobic010G249600--Sobic002G377400 Sobic010G249600--Sobic003G308900 Sobic008G016800 Sobic008G016800 Sobic010G249600--Sobic008G016800 Sobic009G223900 Sobic009G223900 Sobic010G249600--Sobic009G223900 Sobic002G085600 Sobic002G085600 Sobic010G249600--Sobic002G085600 Sobic004G224000 Sobic004G224000 Sobic010G249600--Sobic004G224000 Sobic001G191300 Sobic001G191300 Sobic010G249600--Sobic001G191300 Sobic002G296800--Sobic003G308900 Sobic002G296800--Sobic002G377400 Sobic002G296800--Sobic010G249600 Sobic007G185000 Sobic007G185000 Sobic002G296800--Sobic007G185000 Sobic002G296800--Sobic003G364550 Sobic003G243750 Sobic003G243750 Sobic002G296800--Sobic003G243750 Sobic005G090700 Sobic005G090700 Sobic002G296800--Sobic005G090700 Sobic010G133450 Sobic010G133450 Sobic002G296800--Sobic010G133450 Sobic009G055000 Sobic009G055000 Sobic002G296800--Sobic009G055000 Sobic001G367900 Sobic001G367900 Sobic007G210200--Sobic001G367900 Sobic005G110553 Sobic005G110553 Sobic007G210200--Sobic005G110553 Sobic003G149400 Sobic003G149400 Sobic007G210200--Sobic003G149400 Sobic009G122000 Sobic009G122000 Sobic007G210200--Sobic009G122000 Sobic008G065700 Sobic008G065700 Sobic007G210200--Sobic008G065700 Sobic003G092150 Sobic003G092150 Sobic007G210200--Sobic003G092150 Sobic007G210200--Sobic004G224000 Sobic004G000500 Sobic004G000500 Sobic007G210200--Sobic004G000500 Sobic003G331200 Sobic003G331200 Sobic007G210200--Sobic003G331200 Sobic002G382400 Sobic002G382400 Sobic007G107900--Sobic002G382400 Sobic003G201800 Sobic003G201800 Sobic007G107900--Sobic003G201800 Sobic007G107900--Sobic003G364550 Sobic003G056900 Sobic003G056900 Sobic007G107900--Sobic003G056900 Sobic003G091900 Sobic003G091900 Sobic007G107900--Sobic003G091900 Sobic007G165100 Sobic007G165100 Sobic007G107900--Sobic007G165100 Sobic007G107900--Sobic003G034100 Sobic001G062000 Sobic001G062000 Sobic007G107900--Sobic001G062000 Sobic003G236501 Sobic003G236501 Sobic007G107900--Sobic003G236501 Sobic005G135300--Sobic005G068400 Sobic005G135300--Sobic008G131601 Sobic005G135300--Sobic006G088450 Sobic005G135300--Sobic002G288500 Sobic005G135300--Sobic003G364550 Sobic005G135300--Sobic001G336600 Sobic005G135300--Sobic002G051500 Sobic002G091500 Sobic002G091500 Sobic005G135300--Sobic002G091500 Sobic005G135300--Sobic004G295900 Sobic004G338600 Sobic004G338600 Sobic009G240300--Sobic004G338600 Sobic007G226000 Sobic007G226000 Sobic009G240300--Sobic007G226000 Sobic001G494350 Sobic001G494350 Sobic009G240300--Sobic001G494350 Sobic009G240300--Sobic007G072200 Sobic009G240300--Sobic007G185000 Sobic009G240300--Sobic003G035200 Sobic009G240300--Sobic002G288500 Sobic009G240300--Sobic002G051500 Sobic009G240300--Sobic005G068400
Octagon: transcription factors


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