Gene annotation
Transcriptome id Sobic.007G118800.1
Synonym TIM17-2, Sb07g019440, TIM17, ATTIM17-2
Functional annotation mitochondrial import inner membrane translocase subunit Tim17, putative, expressed
UniProt C5YKM4
Pfam PF02466
Panther DB PTHR10485
NCBI CDD -
KEGG Orthology K17795; mitochondrial import inner membrane translocase subunit TIM17
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G37410 : translocase inner membrane subunit 17-2
RAP-DB (Rice) LOC_Os07g41330.1 : mitochondrial import inner membrane translocase subunit Tim17, putative, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G093700 Jacalin-like lectin domain containing protein, putative, expressed -
2 Sobic.007G065800 Cupin domain containing protein, expressed -
3 Sobic.006G268500 transporter family protein, putative, expressed -
4 Sobic.003G364950 - -
5 Sobic.006G234900 expressed protein -
6 Sobic.005G108601 - -
7 Sobic.004G292001 - -
8 Sobic.001G506750 - -
9 Sobic.002G115025 - -
10 Sobic.006G227750 - -
11 Sobic.002G422300 ethylene-insensitive 3, putative, expressed K14514: ethylene-insensitive protein 3
12 Sobic.009G157450 - -
13 Sobic.001G319900 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./late senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@cytochrome P450, putative, expressed -
14 Sobic.009G071000 HAD superfamily phosphatase, putative, expressed -
15 Sobic.006G214600 - -
16 Sobic.006G019200 "domain confirmed by Pfam database, expression not supported"(PubMedID : 20499123)@OsSAUR4 - Auxin-responsive SAUR gene family member, expressed K14488: SAUR family protein
17 Sobic.010G158500 Zinc finger, C3HC4 type domain containing protein, expressed -
18 Sobic.008G128066 - -
19 Sobic.004G045400 60S ribosomal protein L37a, putative, expressed K02921: RP-L37Ae, large subunit ribosomal protein L37Ae
20 Sobic.010G043900 expressed protein -


Gene co-expression network
sample Sobic007G118800 Sobic007G118800 Sobic002G093700 Sobic002G093700 Sobic007G118800--Sobic002G093700 Sobic007G065800 Sobic007G065800 Sobic007G118800--Sobic007G065800 Sobic006G268500 Sobic006G268500 Sobic007G118800--Sobic006G268500 Sobic003G364950 Sobic003G364950 Sobic007G118800--Sobic003G364950 Sobic006G234900 Sobic006G234900 Sobic007G118800--Sobic006G234900 Sobic005G108601 Sobic005G108601 Sobic007G118800--Sobic005G108601 Sobic004G292001 Sobic004G292001 Sobic007G118800--Sobic004G292001 Sobic001G506750 Sobic001G506750 Sobic007G118800--Sobic001G506750 Sobic002G115025 Sobic002G115025 Sobic007G118800--Sobic002G115025 Sobic001G487400 Sobic001G487400 Sobic002G093700--Sobic001G487400 Sobic008G128066 Sobic008G128066 Sobic002G093700--Sobic008G128066 Sobic006G019200 Sobic006G019200 Sobic002G093700--Sobic006G019200 Sobic007G144501 Sobic007G144501 Sobic002G093700--Sobic007G144501 Sobic002G093700--Sobic006G234900 Sobic002G093700--Sobic002G115025 Sobic004G045400 Sobic004G045400 Sobic002G093700--Sobic004G045400 Sobic001G256200 Sobic001G256200 Sobic002G093700--Sobic001G256200 Sobic006G078900 Sobic006G078900 Sobic002G093700--Sobic006G078900 Sobic007G065800--Sobic004G292001 Sobic004G023500 Sobic004G023500 Sobic007G065800--Sobic004G023500 Sobic002G130601 Sobic002G130601 Sobic007G065800--Sobic002G130601 Sobic007G065900 Sobic007G065900 Sobic007G065800--Sobic007G065900 Sobic008G157800 Sobic008G157800 Sobic007G065800--Sobic008G157800 Sobic004G061701 Sobic004G061701 Sobic007G065800--Sobic004G061701 Sobic005G217300 Sobic005G217300 Sobic007G065800--Sobic005G217300 Sobic002G150100 Sobic002G150100 Sobic007G065800--Sobic002G150100 Sobic009G071000 Sobic009G071000 Sobic006G268500--Sobic009G071000 Sobic008G140900 Sobic008G140900 Sobic006G268500--Sobic008G140900 Sobic009G157450 Sobic009G157450 Sobic006G268500--Sobic009G157450 Sobic006G227750 Sobic006G227750 Sobic006G268500--Sobic006G227750 Sobic008G158332 Sobic008G158332 Sobic006G268500--Sobic008G158332 Sobic002G422300 Sobic002G422300 Sobic006G268500--Sobic002G422300 Sobic002G010900 Sobic002G010900 Sobic006G268500--Sobic002G010900 Sobic006G268500--Sobic006G234900 Sobic006G026500 Sobic006G026500 Sobic006G268500--Sobic006G026500 Sobic006G214600 Sobic006G214600 Sobic003G364950--Sobic006G214600 Sobic010G043900 Sobic010G043900 Sobic003G364950--Sobic010G043900 Sobic003G364950--Sobic004G292001 Sobic004G278400 Sobic004G278400 Sobic003G364950--Sobic004G278400 Sobic005G213500 Sobic005G213500 Sobic003G364950--Sobic005G213500 Sobic003G364300 Sobic003G364300 Sobic003G364950--Sobic003G364300 Sobic003G364950--Sobic002G422300 Sobic003G364000 Sobic003G364000 Sobic003G364950--Sobic003G364000 Sobic002G004900 Sobic002G004900 Sobic003G364950--Sobic002G004900 Sobic006G234900--Sobic005G108601 Sobic006G101300 Sobic006G101300 Sobic006G234900--Sobic006G101300 Sobic006G234900--Sobic002G115025 Sobic006G234900--Sobic006G026500 Sobic003G418500 Sobic003G418500 Sobic006G234900--Sobic003G418500 Sobic006G234900--Sobic001G256200 Sobic002G042000 Sobic002G042000 Sobic006G234900--Sobic002G042000 Sobic006G234900--Sobic002G093700 Sobic006G234900--Sobic006G227750 Sobic005G108601--Sobic002G115025 Sobic005G108601--Sobic006G234900 Sobic005G108601--Sobic001G256200 Sobic005G108601--Sobic006G227750 Sobic005G108601--Sobic006G101300 Sobic006G217900 Sobic006G217900 Sobic005G108601--Sobic006G217900 Sobic005G108601--Sobic002G093700 Sobic001G054500 Sobic001G054500 Sobic005G108601--Sobic001G054500 Sobic005G108601--Sobic002G042000 Sobic004G292001--Sobic007G065900 Sobic004G292001--Sobic007G065800 Sobic004G292001--Sobic002G130601 Sobic004G292001--Sobic003G364950 Sobic004G292001--Sobic008G157800 Sobic004G292001--Sobic005G213500 Sobic004G292001--Sobic004G278400 Sobic004G292001--Sobic004G023500 Sobic007G030400 Sobic007G030400 Sobic004G292001--Sobic007G030400 Sobic005G192200 Sobic005G192200 Sobic001G506750--Sobic005G192200 Sobic001G506750--Sobic002G093700 Sobic002G124500 Sobic002G124500 Sobic001G506750--Sobic002G124500 Sobic001G348300 Sobic001G348300 Sobic001G506750--Sobic001G348300 Sobic001G506750--Sobic009G157450 Sobic001G506750--Sobic007G118800 Sobic005G066100 Sobic005G066100 Sobic001G506750--Sobic005G066100 Sobic001G506750--Sobic006G268500 Sobic002G425000 Sobic002G425000 Sobic001G506750--Sobic002G425000 Sobic002G115025--Sobic005G108601 Sobic002G115025--Sobic006G234900 Sobic002G115025--Sobic001G256200 Sobic002G115025--Sobic006G217900 Sobic002G115025--Sobic002G042000 Sobic002G115025--Sobic001G054500 Sobic002G115025--Sobic002G093700 Sobic002G115025--Sobic007G144501 Sobic002G115025--Sobic006G101300
Octagon: transcription factors


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