Gene annotation
Transcriptome id Sobic.007G128800.1
Synonym
Functional annotation -
UniProt A0A1B6PHS0
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G250200 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@transmembrane amino acid transporter protein, putative, expressed -
2 Sobic.008G182700 thaumatin, putative, expressed -
3 Sobic.005G130400 terpene synthase, putative, expressed K15803: (-)-germacrene D synthase
4 Sobic.002G324000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@isocitrate lyase, putative, expressed K01637: E4.1.3.1, isocitrate lyase
5 Sobic.007G213925 - -
6 Sobic.002G190500 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@alpha-amylase precursor, putative, expressed K01176: AMY, amyA, alpha-amylase
7 Sobic.009G226600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@wax synthase, putative, expressed -
8 Sobic.004G113300 cyclic nucleotide-gated ion channel 1, putative, expressed K05391: cyclic nucleotide gated channel, plant
9 Sobic.002G217133 - K12662: PRPF4, U4/U6 small nuclear ribonucleoprotein PRP4
10 Sobic.002G217133 - K12662: PRPF4, U4/U6 small nuclear ribonucleoprotein PRP4
11 Sobic.002G217133 - K12662: PRPF4, U4/U6 small nuclear ribonucleoprotein PRP4
12 Sobic.003G241500 dehydrogenase, putative, expressed K00031: IDH1, IDH2, isocitrate dehydrogenase
13 Sobic.007G053900 ulp1 protease family, C-terminal catalytic domain containing protein, expressed -
14 Sobic.005G024900 major facilitator superfamily antiporter, putative, expressed -
15 Sobic.002G020950 - -
16 Sobic.002G020950 - -
17 Sobic.002G087800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@1-aminocyclopropane-1-carboxylate oxidase 2, putative, expressed -
18 Sobic.001G182500 GDSL-like lipase/acylhydrolase, putative, expressed -
19 Sobic.009G221200 NBS-LRR disease resistance protein, putative, expressed -
20 Sobic.004G122800 aminotransferase domain containing protein, putative, expressed K18482: 4-amino-4-deoxychorismate lyase


Gene co-expression network
sample Sobic007G128800 Sobic007G128800 Sobic009G250200 Sobic009G250200 Sobic007G128800--Sobic009G250200 Sobic008G182700 Sobic008G182700 Sobic007G128800--Sobic008G182700 Sobic005G130400 Sobic005G130400 Sobic007G128800--Sobic005G130400 Sobic002G324000 Sobic002G324000 Sobic007G128800--Sobic002G324000 Sobic007G213925 Sobic007G213925 Sobic007G128800--Sobic007G213925 Sobic002G190500 Sobic002G190500 Sobic007G128800--Sobic002G190500 Sobic009G226600 Sobic009G226600 Sobic007G128800--Sobic009G226600 Sobic004G113300 Sobic004G113300 Sobic007G128800--Sobic004G113300 Sobic002G217133 Sobic002G217133 Sobic007G128800--Sobic002G217133 Sobic009G250200--Sobic007G128800 Sobic005G024900 Sobic005G024900 Sobic009G250200--Sobic005G024900 Sobic009G250200--Sobic002G324000 Sobic009G250200--Sobic002G190500 Sobic003G241500 Sobic003G241500 Sobic009G250200--Sobic003G241500 Sobic009G250200--Sobic008G182700 Sobic009G250200--Sobic009G226600 Sobic006G244400 Sobic006G244400 Sobic009G250200--Sobic006G244400 Sobic007G196300 Sobic007G196300 Sobic009G250200--Sobic007G196300 Sobic008G182700--Sobic002G324000 Sobic003G184900 Sobic003G184900 Sobic008G182700--Sobic003G184900 Sobic008G182700--Sobic009G226600 Sobic008G079300 Sobic008G079300 Sobic008G182700--Sobic008G079300 Sobic005G169400 Sobic005G169400 Sobic008G182700--Sobic005G169400 Sobic008G182700--Sobic002G190500 Sobic009G207600 Sobic009G207600 Sobic008G182700--Sobic009G207600 Sobic004G063400 Sobic004G063400 Sobic008G182700--Sobic004G063400 Sobic002G087800 Sobic002G087800 Sobic008G182700--Sobic002G087800 Sobic005G130400--Sobic002G324000 Sobic005G130400--Sobic002G190500 Sobic005G130400--Sobic004G113300 Sobic004G050200 Sobic004G050200 Sobic005G130400--Sobic004G050200 Sobic005G130400--Sobic002G217133 Sobic006G036900 Sobic006G036900 Sobic005G130400--Sobic006G036900 Sobic008G028800 Sobic008G028800 Sobic005G130400--Sobic008G028800 Sobic002G324000--Sobic002G190500 Sobic002G324000--Sobic004G113300 Sobic002G324000--Sobic003G184900 Sobic002G324000--Sobic005G130400 Sobic004G321800 Sobic004G321800 Sobic002G324000--Sobic004G321800 Sobic002G324000--Sobic004G050200 Sobic001G274800 Sobic001G274800 Sobic002G324000--Sobic001G274800 Sobic002G324000--Sobic008G182700 Sobic004G060900 Sobic004G060900 Sobic002G324000--Sobic004G060900 Sobic001G176501 Sobic001G176501 Sobic007G213925--Sobic001G176501 Sobic007G213925--Sobic002G190500 Sobic002G122200 Sobic002G122200 Sobic007G213925--Sobic002G122200 Sobic007G213925--Sobic002G324000 Sobic001G182500 Sobic001G182500 Sobic007G213925--Sobic001G182500 Sobic003G174400 Sobic003G174400 Sobic007G213925--Sobic003G174400 Sobic007G079000 Sobic007G079000 Sobic007G213925--Sobic007G079000 Sobic007G213925--Sobic008G182700 Sobic007G213925--Sobic005G130400 Sobic002G190500--Sobic002G324000 Sobic002G190500--Sobic004G113300 Sobic002G190500--Sobic005G130400 Sobic002G190500--Sobic004G050200 Sobic002G190500--Sobic003G184900 Sobic004G345800 Sobic004G345800 Sobic002G190500--Sobic004G345800 Sobic002G190500--Sobic004G321800 Sobic007G216201 Sobic007G216201 Sobic002G190500--Sobic007G216201 Sobic002G190500--Sobic008G079300 Sobic009G226600--Sobic008G079300 Sobic009G226600--Sobic002G087800 Sobic009G226600--Sobic009G207600 Sobic001G474500 Sobic001G474500 Sobic009G226600--Sobic001G474500 Sobic009G226600--Sobic008G182700 Sobic009G226600--Sobic003G184900 Sobic009G226600--Sobic002G324000 Sobic006G181300 Sobic006G181300 Sobic009G226600--Sobic006G181300 Sobic001G359500 Sobic001G359500 Sobic009G226600--Sobic001G359500 Sobic004G113300--Sobic002G324000 Sobic004G113300--Sobic002G190500 Sobic004G113300--Sobic004G050200 Sobic004G113300--Sobic003G184900 Sobic004G113300--Sobic008G079300 Sobic004G113300--Sobic005G130400 Sobic004G113300--Sobic001G274800 Sobic003G105800 Sobic003G105800 Sobic004G113300--Sobic003G105800 Sobic004G113300--Sobic004G060900 Sobic002G217133--Sobic002G217133 Sobic002G217133--Sobic005G130400 Sobic002G217133--Sobic006G036900 Sobic010G024700 Sobic010G024700 Sobic002G217133--Sobic010G024700 Sobic002G217133--Sobic004G113300 Sobic002G217133--Sobic002G190500 Sobic005G196200 Sobic005G196200 Sobic002G217133--Sobic005G196200 Sobic002G217133--Sobic004G050200
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.