Gene annotation
Transcriptome id Sobic.007G175200.1
Synonym Sb07g024700
Functional annotation carrier, putative, expressed
UniProt C5YND6
Pfam PF03087
Panther DB PTHR33070 PTHR33070:SF2
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G17080 : Arabidopsis protein of unknown function (DUF241)
RAP-DB (Rice) LOC_Os08g43770.1 : carrier, putative, expressed
MaizeGDB (Corn) Zm00025a005664
Brachypodium PNT68555
Barley HORVU7Hr1G057970.3 , HORVU7Hr1G057970.2 , HORVU7Hr1G057970.4
Wheat -
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G217600 STE_MEKK_ste11_MAP3K.19 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed -
2 Sobic.004G319700 ethylene-responsive transcription factor, putative, expressed -
3 Sobic.009G120800 OsCML15 - Calmodulin-related calcium sensor protein, expressed K13448: calcium-binding protein CML
4 Sobic.004G280900 zinc finger, C3HC4 type domain containing protein, expressed -
5 Sobic.001G192800 AAA-type ATPase family protein, putative, expressed -
6 Sobic.001G341600 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@tyrosine protein kinase domain containing protein, putative, expressed -
7 Sobic.003G361100 hs1, putative, expressed -
8 Sobic.005G037000 cytochrome P450, putative, expressed -
9 Sobic.003G353800 avr9/Cf-9 rapidly elicited protein, putative, expressed -
10 Sobic.010G076600 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@Serine/threonine-protein kinase RIPK(PubMedID : 31721651)@tyrosine protein kinase domain containing protein, putative, expressed -
11 Sobic.004G311500 "domain confirmed by Pfam database, expression not supported"(PubMedID : 20499123)@OsSAUR12 - Auxin-responsive SAUR gene family member, expressed K14488: SAUR family protein
12 Sobic.001G441100 immediate-early fungal elicitor protein CMPG1, putative, expressed -
13 Sobic.007G126300 spotted leaf 11, putative, expressed -
14 Sobic.001G077400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@cytochrome P450, putative, expressed K01723: hydroperoxide dehydratase
15 Sobic.001G209800 harpin-induced protein 1 domain containing protein, expressed -
16 Sobic.004G032300 OsSGL(Ortholog in rice:Wang et al. (2016))(PubMedID : 31659876)@DUF1645 domain containing protein, putative, expressed -
17 Sobic.001G035000 ZOS3-22 - C2H2 zinc finger protein, expressed -
18 Sobic.008G042900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@harpin-induced protein 1 domain containing protein, expressed -
19 Sobic.003G416500 SRC2 protein, putative, expressed -
20 Sobic.001G489500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -


Gene co-expression network
sample Sobic007G175200 Sobic007G175200 Sobic009G217600 Sobic009G217600 Sobic007G175200--Sobic009G217600 Sobic004G319700 Sobic004G319700 Sobic007G175200--Sobic004G319700 Sobic009G120800 Sobic009G120800 Sobic007G175200--Sobic009G120800 Sobic004G280900 Sobic004G280900 Sobic007G175200--Sobic004G280900 Sobic001G192800 Sobic001G192800 Sobic007G175200--Sobic001G192800 Sobic001G341600 Sobic001G341600 Sobic007G175200--Sobic001G341600 Sobic003G361100 Sobic003G361100 Sobic007G175200--Sobic003G361100 Sobic005G037000 Sobic005G037000 Sobic007G175200--Sobic005G037000 Sobic003G353800 Sobic003G353800 Sobic007G175200--Sobic003G353800 Sobic001G441100 Sobic001G441100 Sobic009G217600--Sobic001G441100 Sobic009G217600--Sobic001G341600 Sobic001G077400 Sobic001G077400 Sobic009G217600--Sobic001G077400 Sobic001G035000 Sobic001G035000 Sobic009G217600--Sobic001G035000 Sobic009G217600--Sobic004G280900 Sobic001G209800 Sobic001G209800 Sobic009G217600--Sobic001G209800 Sobic009G217600--Sobic005G037000 Sobic009G217600--Sobic003G353800 Sobic002G278500 Sobic002G278500 Sobic009G217600--Sobic002G278500 Sobic004G319700--Sobic009G120800 Sobic004G319700--Sobic004G280900 Sobic004G319700--Sobic001G441100 Sobic004G319700--Sobic009G217600 Sobic007G122500 Sobic007G122500 Sobic004G319700--Sobic007G122500 Sobic004G319700--Sobic002G278500 Sobic004G319700--Sobic005G037000 Sobic006G163401 Sobic006G163401 Sobic004G319700--Sobic006G163401 Sobic004G319700--Sobic001G077400 Sobic009G120800--Sobic004G319700 Sobic009G120800--Sobic001G441100 Sobic009G120800--Sobic009G217600 Sobic009G120800--Sobic001G035000 Sobic003G416500 Sobic003G416500 Sobic009G120800--Sobic003G416500 Sobic009G120800--Sobic005G037000 Sobic009G120800--Sobic007G122500 Sobic009G120800--Sobic001G341600 Sobic009G120800--Sobic004G280900 Sobic004G280900--Sobic001G077400 Sobic004G280900--Sobic005G037000 Sobic004G280900--Sobic009G217600 Sobic004G280900--Sobic001G209800 Sobic004G280900--Sobic001G441100 Sobic002G036100 Sobic002G036100 Sobic004G280900--Sobic002G036100 Sobic002G140300 Sobic002G140300 Sobic004G280900--Sobic002G140300 Sobic001G538866 Sobic001G538866 Sobic004G280900--Sobic001G538866 Sobic004G280900--Sobic001G341600 Sobic001G196900 Sobic001G196900 Sobic001G192800--Sobic001G196900 Sobic001G192800--Sobic009G217600 Sobic001G192800--Sobic001G035000 Sobic009G217500 Sobic009G217500 Sobic001G192800--Sobic009G217500 Sobic003G341100 Sobic003G341100 Sobic001G192800--Sobic003G341100 Sobic001G192800--Sobic003G361100 Sobic006G273800 Sobic006G273800 Sobic001G192800--Sobic006G273800 Sobic006G184400 Sobic006G184400 Sobic001G192800--Sobic006G184400 Sobic001G192800--Sobic001G341600 Sobic001G341600--Sobic009G217600 Sobic001G341600--Sobic001G441100 Sobic001G341600--Sobic001G035000 Sobic001G341600--Sobic001G077400 Sobic001G341600--Sobic004G280900 Sobic001G341600--Sobic002G140300 Sobic001G341600--Sobic003G353800 Sobic001G341600--Sobic002G278500 Sobic001G341600--Sobic001G538866 Sobic003G361100--Sobic001G035000 Sobic003G361100--Sobic001G192800 Sobic009G204100 Sobic009G204100 Sobic003G361100--Sobic009G204100 Sobic003G361100--Sobic009G217600 Sobic003G361100--Sobic001G441100 Sobic003G361100--Sobic003G353800 Sobic003G361100--Sobic006G184400 Sobic003G361100--Sobic005G037000 Sobic003G361100--Sobic001G209800 Sobic005G037000--Sobic001G077400 Sobic005G037000--Sobic004G280900 Sobic005G037000--Sobic001G441100 Sobic005G037000--Sobic001G035000 Sobic005G037000--Sobic001G209800 Sobic005G037000--Sobic009G217600 Sobic007G126300 Sobic007G126300 Sobic005G037000--Sobic007G126300 Sobic001G259600 Sobic001G259600 Sobic005G037000--Sobic001G259600 Sobic006G165100 Sobic006G165100 Sobic005G037000--Sobic006G165100 Sobic003G353800--Sobic009G217600 Sobic003G353800--Sobic001G341600 Sobic003G353800--Sobic001G441100 Sobic003G353800--Sobic001G035000 Sobic003G353800--Sobic002G278500 Sobic003G353800--Sobic001G077400 Sobic003G353800--Sobic009G217500 Sobic008G042900 Sobic008G042900 Sobic003G353800--Sobic008G042900 Sobic003G353800--Sobic003G416500
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.