Gene annotation
Transcriptome id Sobic.007G194600.1
Synonym Sb07g026310
Functional annotation regulatory protein, putative, expressed
UniProt C5YI30
Pfam PF03407
Panther DB PTHR24015 PTHR24015:SF868
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G14590 : Nucleotide-diphospho-sugar transferase family protein
RAP-DB (Rice) LOC_Os08g41800.1 : regulatory protein, putative, expressed
MaizeGDB (Corn) Zm00025a005252 , Zm00025a045650
Brachypodium KQJ99106 , PNT68487
Barley HORVU7Hr1G054000.1 , HORVU7Hr1G054000.2 , HORVU7Hr1G054000.3 , HORVU7Hr1G054000.4 , HORVU7Hr1G054000.5 , HORVU7Hr1G054000.6 , HORVU2Hr1G005990.11 , HORVU2Hr1G005990.10 , HORVU2Hr1G005990.9 , HORVU2Hr1G005990.8 , HORVU2Hr1G005990.5 , HORVU2Hr1G005990.4 , HORVU2Hr1G005990.7 , HORVU2Hr1G005990.6 , HORVU2Hr1G005990.1 , HORVU2Hr1G005990.3 , HORVU2Hr1G005990.2 , HORVU3Hr1G094380.1 , HORVU3Hr1G094250.8 , HORVU3Hr1G094250.5 , HORVU3Hr1G094250.4 , HORVU3Hr1G094250.6 , HORVU3Hr1G094250.1 , HORVU3Hr1G094250.3 , HORVU3Hr1G094250.2
Wheat TraesCS2D02G038300 , TraesCS2D02G038300 , TraesCS7D02G260400 , TraesCS7B02G157200 , TraesCS2A02G039700 , TraesCS2A02G039700 , TraesCS3D02G423700 , TraesCS7A02G259400 , TraesCS3D02G423600
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G047100 actin, putative, expressed K10355: actin, other eukaryote
2 Sobic.004G297950 - -
3 Sobic.001G484000 hydrolase, alpha/beta fold family protein, putative, expressed -
4 Sobic.005G130600 expressed protein -
5 Sobic.003G250700 fasciclin domain containing protein, expressed -
6 Sobic.003G321400 plastocyanin-like domain containing protein, putative, expressed -
7 Sobic.003G135400 tubulin/FtsZ domain containing protein, putative, expressed K07375: tubulin beta
8 Sobic.002G360301 - -
9 Sobic.001G521300 expressed protein -
10 Sobic.001G107200 tubulin/FtsZ domain containing protein, putative, expressed K07374: tubulin alpha
11 Sobic.003G269100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@AWPM-19-like membrane family protein, putative, expressed -
12 Sobic.002G258300 peroxidase precursor, putative, expressed K00430: peroxidase
13 Sobic.001G103000 DNA binding protein, putative, expressed -
14 Sobic.004G355500 RPA2A - Putative single-stranded DNA binding complex subunit 2, expressed K10739: RFA2, replication factor A2
15 Sobic.006G278100 expressed protein -
16 Sobic.004G197400 expressed protein K00558: DNMT1, DNA (cytosine-5)-methyltransferase 1
17 Sobic.001G107100 "SRS5(Ortholog in rice:Segami, 2012)"(PubMedID : 31659833)@tubulin/FtsZ domain containing protein, putative, expressed K07374: tubulin alpha
18 Sobic.003G115200 expressed protein -
19 Sobic.009G088200 -(PubMedID : 26976818)@triosephosphate/phosphate translocator(PubMedID : 27016024)@phosphate/phosphate translocator, putative, expressed K15283: solute carrier family 35, member E1
20 Sobic.001G038300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@leaf senescence related protein, putative, expressed -


Gene co-expression network
sample Sobic007G194600 Sobic007G194600 Sobic005G047100 Sobic005G047100 Sobic007G194600--Sobic005G047100 Sobic004G297950 Sobic004G297950 Sobic007G194600--Sobic004G297950 Sobic001G484000 Sobic001G484000 Sobic007G194600--Sobic001G484000 Sobic005G130600 Sobic005G130600 Sobic007G194600--Sobic005G130600 Sobic003G250700 Sobic003G250700 Sobic007G194600--Sobic003G250700 Sobic003G321400 Sobic003G321400 Sobic007G194600--Sobic003G321400 Sobic003G135400 Sobic003G135400 Sobic007G194600--Sobic003G135400 Sobic002G360301 Sobic002G360301 Sobic007G194600--Sobic002G360301 Sobic001G521300 Sobic001G521300 Sobic007G194600--Sobic001G521300 Sobic005G047100--Sobic004G297950 Sobic003G247600 Sobic003G247600 Sobic005G047100--Sobic003G247600 Sobic007G225400 Sobic007G225400 Sobic005G047100--Sobic007G225400 Sobic004G170900 Sobic004G170900 Sobic005G047100--Sobic004G170900 Sobic005G047100--Sobic001G521300 Sobic005G047100--Sobic003G321400 Sobic004G170800 Sobic004G170800 Sobic005G047100--Sobic004G170800 Sobic005G047100--Sobic003G135400 Sobic003G420100 Sobic003G420100 Sobic005G047100--Sobic003G420100 Sobic003G269100 Sobic003G269100 Sobic004G297950--Sobic003G269100 Sobic004G297950--Sobic005G130600 Sobic004G297950--Sobic003G321400 Sobic005G110600 Sobic005G110600 Sobic004G297950--Sobic005G110600 Sobic004G297950--Sobic005G047100 Sobic001G099600 Sobic001G099600 Sobic004G297950--Sobic001G099600 Sobic001G264400 Sobic001G264400 Sobic004G297950--Sobic001G264400 Sobic005G052500 Sobic005G052500 Sobic004G297950--Sobic005G052500 Sobic004G297950--Sobic001G484000 Sobic001G484000--Sobic005G052500 Sobic001G046800 Sobic001G046800 Sobic001G484000--Sobic001G046800 Sobic003G352700 Sobic003G352700 Sobic001G484000--Sobic003G352700 Sobic002G053900 Sobic002G053900 Sobic001G484000--Sobic002G053900 Sobic001G484000--Sobic003G269100 Sobic003G082700 Sobic003G082700 Sobic001G484000--Sobic003G082700 Sobic002G094600 Sobic002G094600 Sobic001G484000--Sobic002G094600 Sobic009G008800 Sobic009G008800 Sobic001G484000--Sobic009G008800 Sobic003G239100 Sobic003G239100 Sobic001G484000--Sobic003G239100 Sobic005G130600--Sobic004G297950 Sobic005G130600--Sobic003G321400 Sobic005G130600--Sobic003G269100 Sobic005G130600--Sobic005G110600 Sobic001G140800 Sobic001G140800 Sobic005G130600--Sobic001G140800 Sobic003G115200 Sobic003G115200 Sobic005G130600--Sobic003G115200 Sobic006G096500 Sobic006G096500 Sobic005G130600--Sobic006G096500 Sobic005G130600--Sobic001G046800 Sobic005G130600--Sobic001G099600 Sobic001G107100 Sobic001G107100 Sobic003G250700--Sobic001G107100 Sobic001G038300 Sobic001G038300 Sobic003G250700--Sobic001G038300 Sobic003G250700--Sobic001G046800 Sobic003G000200 Sobic003G000200 Sobic003G250700--Sobic003G000200 Sobic010G047600 Sobic010G047600 Sobic003G250700--Sobic010G047600 Sobic003G250700--Sobic003G321400 Sobic010G014400 Sobic010G014400 Sobic003G250700--Sobic010G014400 Sobic003G250700--Sobic004G170800 Sobic001G156500 Sobic001G156500 Sobic003G250700--Sobic001G156500 Sobic003G321400--Sobic003G269100 Sobic003G321400--Sobic003G115200 Sobic009G221800 Sobic009G221800 Sobic003G321400--Sobic009G221800 Sobic003G321400--Sobic010G047600 Sobic003G321400--Sobic003G000200 Sobic003G078900 Sobic003G078900 Sobic003G321400--Sobic003G078900 Sobic001G261460 Sobic001G261460 Sobic003G321400--Sobic001G261460 Sobic003G321400--Sobic001G264400 Sobic003G321400--Sobic001G099600 Sobic003G410600 Sobic003G410600 Sobic003G135400--Sobic003G410600 Sobic001G078600 Sobic001G078600 Sobic003G135400--Sobic001G078600 Sobic003G294500 Sobic003G294500 Sobic003G135400--Sobic003G294500 Sobic004G197400 Sobic004G197400 Sobic003G135400--Sobic004G197400 Sobic008G141200 Sobic008G141200 Sobic003G135400--Sobic008G141200 Sobic005G144600 Sobic005G144600 Sobic003G135400--Sobic005G144600 Sobic007G219400 Sobic007G219400 Sobic003G135400--Sobic007G219400 Sobic001G103000 Sobic001G103000 Sobic003G135400--Sobic001G103000 Sobic003G135400--Sobic005G047100 Sobic006G278100 Sobic006G278100 Sobic002G360301--Sobic006G278100 Sobic007G214700 Sobic007G214700 Sobic002G360301--Sobic007G214700 Sobic009G232200 Sobic009G232200 Sobic002G360301--Sobic009G232200 Sobic002G360301--Sobic003G135400 Sobic001G108400 Sobic001G108400 Sobic002G360301--Sobic001G108400 Sobic004G355500 Sobic004G355500 Sobic002G360301--Sobic004G355500 Sobic007G176800 Sobic007G176800 Sobic002G360301--Sobic007G176800 Sobic002G360301--Sobic007G194600 Sobic002G258300 Sobic002G258300 Sobic002G360301--Sobic002G258300 Sobic001G521300--Sobic010G047600 Sobic001G521300--Sobic005G047100 Sobic001G521300--Sobic003G321400 Sobic001G521300--Sobic003G269100 Sobic001G521300--Sobic003G250700 Sobic001G521300--Sobic001G261460 Sobic001G521300--Sobic001G046800 Sobic001G521300--Sobic001G156500 Sobic006G119000 Sobic006G119000 Sobic001G521300--Sobic006G119000
Octagon: transcription factors


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