Gene annotation
Transcriptome id Sobic.007G197300.2,Sobic.007G197300.1,Sobic.007G197300.3,Sobic.007G197300.4
Synonym Sb07g026570
Functional annotation expressed protein
UniProt A0A1B6PIQ5 , A0A1Z5RAQ2
Pfam -
Panther DB PTHR33165:SF10 PTHR33165 PTHR33165 PTHR33165:SF10
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G17036 : F-box family protein with a domain of unknown function (DUF295)
RAP-DB (Rice) LOC_Os04g40920.1 : expressed protein
MaizeGDB (Corn) -
Brachypodium KQJ85174 , PNT63238
Barley HORVU3Hr1G091030.1
Wheat TraesCS3D02G138000 , TraesCS2B02G503800 , TraesCS3D02G402100 , TraesCS3D02G402100 , TraesCS3A02G137200 , TraesCS2D02G487800 , TraesCS2A02G479200
Populus -


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cDNA sequences
Sobic.007G197300


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G313400 tRNA-splicing endonuclease positive effector-related, putative, expressed K10706: SETX, senataxin
2 Sobic.003G190300 - -
3 Sobic.009G000400 expressed protein -
4 Sobic.002G115500 PHD finger protein, putative, expressed -
5 Sobic.010G235600 OsFBLD1 - F-box, LRR and FBD domain containing protein, expressed -
6 Sobic.006G215900 OsFBX172 - F-box domain containing protein, expressed -
7 Sobic.003G039900 OsFBDUF1 - F-box and DUF domain containing protein, expressed -
8 Sobic.004G024700 RNA polymerase II transcription factor B subunit 4, putative, expressed K03143: TFIIH3, GTF2H3, transcription initiation factor TFIIH subunit 3
9 Sobic.006G224300 APO, putative, expressed -
10 Sobic.008G058800 OsFBX369 - F-box domain containing protein, expressed -
11 Sobic.001G490900 growth regulator related protein, putative, expressed -
12 Sobic.007G061700 vacuolar protein sorting-associated protein 18, putative, expressed -
13 Sobic.007G147400 - -
14 Sobic.004G357100 expressed protein -
15 Sobic.001G296500 ARABIDILLO-1, putative, expressed -
16 Sobic.009G137100 bZIP transcription factor domain containing protein, expressed -
17 Sobic.008G149800 histone acetyltransferase HAC5, putative, expressed K04498: EP300, CREBBP, E1A/CREB-binding protein
18 Sobic.001G376100 expressed high in CK60 (an inefficient nitrogen user)(PubMedID : 28697783)@OsFBX72 - F-box domain containing protein, expressed -
19 Sobic.009G260650 - -
20 Sobic.006G116100 RNA recognition motif containing protein, putative, expressed -


Gene co-expression network
sample Sobic007G197300 Sobic007G197300 Sobic001G313400 Sobic001G313400 Sobic007G197300--Sobic001G313400 Sobic003G190300 Sobic003G190300 Sobic007G197300--Sobic003G190300 Sobic009G000400 Sobic009G000400 Sobic007G197300--Sobic009G000400 Sobic002G115500 Sobic002G115500 Sobic007G197300--Sobic002G115500 Sobic010G235600 Sobic010G235600 Sobic007G197300--Sobic010G235600 Sobic006G215900 Sobic006G215900 Sobic007G197300--Sobic006G215900 Sobic003G039900 Sobic003G039900 Sobic007G197300--Sobic003G039900 Sobic004G024700 Sobic004G024700 Sobic007G197300--Sobic004G024700 Sobic006G224300 Sobic006G224300 Sobic007G197300--Sobic006G224300 Sobic003G394200 Sobic003G394200 Sobic001G313400--Sobic003G394200 Sobic003G189600 Sobic003G189600 Sobic001G313400--Sobic003G189600 Sobic006G224800 Sobic006G224800 Sobic001G313400--Sobic006G224800 Sobic009G166600 Sobic009G166600 Sobic001G313400--Sobic009G166600 Sobic004G357100 Sobic004G357100 Sobic001G313400--Sobic004G357100 Sobic006G128100 Sobic006G128100 Sobic001G313400--Sobic006G128100 Sobic001G308400 Sobic001G308400 Sobic001G313400--Sobic001G308400 Sobic009G249700 Sobic009G249700 Sobic001G313400--Sobic009G249700 Sobic007G218000 Sobic007G218000 Sobic001G313400--Sobic007G218000 Sobic003G205501 Sobic003G205501 Sobic003G190300--Sobic003G205501 Sobic005G040900 Sobic005G040900 Sobic003G190300--Sobic005G040900 Sobic001G296500 Sobic001G296500 Sobic003G190300--Sobic001G296500 Sobic006G072900 Sobic006G072900 Sobic003G190300--Sobic006G072900 Sobic003G205801 Sobic003G205801 Sobic003G190300--Sobic003G205801 Sobic003G190300--Sobic002G115500 Sobic004G045566 Sobic004G045566 Sobic003G190300--Sobic004G045566 Sobic008G127400 Sobic008G127400 Sobic003G190300--Sobic008G127400 Sobic001G267900 Sobic001G267900 Sobic003G190300--Sobic001G267900 Sobic009G074700 Sobic009G074700 Sobic009G000400--Sobic009G074700 Sobic006G028700 Sobic006G028700 Sobic009G000400--Sobic006G028700 Sobic009G040800 Sobic009G040800 Sobic009G000400--Sobic009G040800 Sobic006G180700 Sobic006G180700 Sobic009G000400--Sobic006G180700 Sobic009G000400--Sobic002G115500 Sobic007G026000 Sobic007G026000 Sobic009G000400--Sobic007G026000 Sobic009G000400--Sobic005G040900 Sobic010G279900 Sobic010G279900 Sobic009G000400--Sobic010G279900 Sobic001G085700 Sobic001G085700 Sobic009G000400--Sobic001G085700 Sobic002G115500--Sobic009G040800 Sobic002G115500--Sobic009G000400 Sobic009G260650 Sobic009G260650 Sobic002G115500--Sobic009G260650 Sobic006G281700 Sobic006G281700 Sobic002G115500--Sobic006G281700 Sobic002G115500--Sobic005G040900 Sobic009G122500 Sobic009G122500 Sobic002G115500--Sobic009G122500 Sobic003G240700 Sobic003G240700 Sobic002G115500--Sobic003G240700 Sobic002G115500--Sobic006G224300 Sobic004G345400 Sobic004G345400 Sobic002G115500--Sobic004G345400 Sobic001G215400 Sobic001G215400 Sobic010G235600--Sobic001G215400 Sobic001G425000 Sobic001G425000 Sobic010G235600--Sobic001G425000 Sobic009G017200 Sobic009G017200 Sobic010G235600--Sobic009G017200 Sobic003G417900 Sobic003G417900 Sobic010G235600--Sobic003G417900 Sobic010G235600--Sobic007G026000 Sobic008G058800 Sobic008G058800 Sobic010G235600--Sobic008G058800 Sobic010G235600--Sobic003G205501 Sobic010G202600 Sobic010G202600 Sobic010G235600--Sobic010G202600 Sobic006G130200 Sobic006G130200 Sobic010G235600--Sobic006G130200 Sobic004G219100 Sobic004G219100 Sobic006G215900--Sobic004G219100 Sobic004G067700 Sobic004G067700 Sobic006G215900--Sobic004G067700 Sobic002G158700 Sobic002G158700 Sobic006G215900--Sobic002G158700 Sobic001G106100 Sobic001G106100 Sobic006G215900--Sobic001G106100 Sobic004G111700 Sobic004G111700 Sobic006G215900--Sobic004G111700 Sobic002G103600 Sobic002G103600 Sobic006G215900--Sobic002G103600 Sobic006G215900--Sobic003G039900 Sobic001G376100 Sobic001G376100 Sobic006G215900--Sobic001G376100 Sobic008G149800 Sobic008G149800 Sobic006G215900--Sobic008G149800 Sobic001G141400 Sobic001G141400 Sobic003G039900--Sobic001G141400 Sobic007G147400 Sobic007G147400 Sobic003G039900--Sobic007G147400 Sobic006G234700 Sobic006G234700 Sobic003G039900--Sobic006G234700 Sobic003G444800 Sobic003G444800 Sobic003G039900--Sobic003G444800 Sobic003G039900--Sobic004G111700 Sobic003G039900--Sobic002G103600 Sobic009G228000 Sobic009G228000 Sobic003G039900--Sobic009G228000 Sobic003G039900--Sobic001G376100 Sobic001G376200 Sobic001G376200 Sobic003G039900--Sobic001G376200 Sobic004G024700--Sobic007G147400 Sobic005G013200 Sobic005G013200 Sobic004G024700--Sobic005G013200 Sobic007G103600 Sobic007G103600 Sobic004G024700--Sobic007G103600 Sobic006G186400 Sobic006G186400 Sobic004G024700--Sobic006G186400 Sobic004G024700--Sobic009G017200 Sobic002G165800 Sobic002G165800 Sobic004G024700--Sobic002G165800 Sobic004G024700--Sobic002G103600 Sobic002G063900 Sobic002G063900 Sobic004G024700--Sobic002G063900 Sobic001G295500 Sobic001G295500 Sobic004G024700--Sobic001G295500 Sobic008G021000 Sobic008G021000 Sobic006G224300--Sobic008G021000 Sobic004G084500 Sobic004G084500 Sobic006G224300--Sobic004G084500 Sobic009G059400 Sobic009G059400 Sobic006G224300--Sobic009G059400 Sobic006G224300--Sobic004G345400 Sobic006G224300--Sobic003G394200 Sobic006G224300--Sobic009G040800 Sobic006G224300--Sobic009G017200 Sobic006G224300--Sobic002G115500 Sobic006G203300 Sobic006G203300 Sobic006G224300--Sobic006G203300
Octagon: transcription factors


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