Gene annotation
Transcriptome id Sobic.008G008900.2,Sobic.008G008900.1
Synonym Sb08g000850
Functional annotation staphylococcal nuclease homologue, putative, expressed
UniProt C5YQ60 , A0A1B6PAQ3
Pfam PF00565
Panther DB PTHR12302 PTHR12302:SF4
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G40410 : Staphylococcal nuclease homologue
RAP-DB (Rice) LOC_Os11g01830.1 : staphylococcal nuclease homologue, putative, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat TraesCS5B02G148900 , TraesCS5B02G148800 , TraesCS5A02G150200 , TraesCS5D02G155300 , TraesCS5D02G155300
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G110469 - -
2 Sobic.007G067800 - -
3 Sobic.002G299300 ethylene-responsive protein related, putative, expressed -
4 Sobic.009G142800 amino acid transporter, putative, expressed -
5 Sobic.005G094600 DUF581 domain containing protein, expressed -
6 Sobic.001G461000 keratin, type I cytoskeletal 9, putative, expressed -
7 Sobic.010G165500 ABC-2 type transporter, putative, expressed -
8 Sobic.010G019300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@hydrolase, NUDIX family, domain containing protein, expressed K18447: ADP-sugar diphosphatase
9 Sobic.002G233400 plastocyanin-like domain containing protein, putative, expressed -
10 Sobic.003G442900 expressed protein -
11 Sobic.004G059600 DUF581 domain containing protein, expressed -
12 Sobic.010G083500 pyridine nucleotide-disulphide oxidoreductase domain containing protein, expressed K17872: NDC1, demethylphylloquinone reductase
13 Sobic.004G358200 RING-H2 finger protein, putative, expressed -
14 Sobic.008G077600 diacylglycerol kinase 1, putative, expressed K00901: dgkA, diacylglycerol kinase (ATP)
15 Sobic.003G410100 protein kinase domain containing protein, expressed K08819: cyclin-dependent kinase 12/13
16 Sobic.008G025100 DUF567 domain containing protein, putative, expressed -
17 Sobic.007G224400 bZIP transcription factor domain containing protein, expressed -
18 Sobic.001G496300 1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase protein, putative, expressed K08967: mtnD, mtnZ, 1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase
19 Sobic.001G357300 cystathionine gamma-synthase, putative, expressed K01739: cystathionine gamma-synthase
20 Sobic.006G026000 - -


Gene co-expression network
sample Sobic008G008900 Sobic008G008900 Sobic005G110469 Sobic005G110469 Sobic008G008900--Sobic005G110469 Sobic007G067800 Sobic007G067800 Sobic008G008900--Sobic007G067800 Sobic002G299300 Sobic002G299300 Sobic008G008900--Sobic002G299300 Sobic009G142800 Sobic009G142800 Sobic008G008900--Sobic009G142800 Sobic005G094600 Sobic005G094600 Sobic008G008900--Sobic005G094600 Sobic001G461000 Sobic001G461000 Sobic008G008900--Sobic001G461000 Sobic010G165500 Sobic010G165500 Sobic008G008900--Sobic010G165500 Sobic010G019300 Sobic010G019300 Sobic008G008900--Sobic010G019300 Sobic002G233400 Sobic002G233400 Sobic008G008900--Sobic002G233400 Sobic006G026600 Sobic006G026600 Sobic005G110469--Sobic006G026600 Sobic007G058200 Sobic007G058200 Sobic005G110469--Sobic007G058200 Sobic005G110469--Sobic008G008900 Sobic005G110469--Sobic005G094600 Sobic002G323700 Sobic002G323700 Sobic005G110469--Sobic002G323700 Sobic008G099600 Sobic008G099600 Sobic005G110469--Sobic008G099600 Sobic002G214300 Sobic002G214300 Sobic005G110469--Sobic002G214300 Sobic005G037300 Sobic005G037300 Sobic005G110469--Sobic005G037300 Sobic006G201700 Sobic006G201700 Sobic005G110469--Sobic006G201700 Sobic005G031901 Sobic005G031901 Sobic007G067800--Sobic005G031901 Sobic003G126750 Sobic003G126750 Sobic007G067800--Sobic003G126750 Sobic002G153900 Sobic002G153900 Sobic007G067800--Sobic002G153900 Sobic004G358301 Sobic004G358301 Sobic007G067800--Sobic004G358301 Sobic006G026300 Sobic006G026300 Sobic007G067800--Sobic006G026300 Sobic006G109600 Sobic006G109600 Sobic007G067800--Sobic006G109600 Sobic002G100100 Sobic002G100100 Sobic007G067800--Sobic002G100100 Sobic010G147300 Sobic010G147300 Sobic007G067800--Sobic010G147300 Sobic004G358200 Sobic004G358200 Sobic007G067800--Sobic004G358200 Sobic007G055700 Sobic007G055700 Sobic002G299300--Sobic007G055700 Sobic006G161600 Sobic006G161600 Sobic002G299300--Sobic006G161600 Sobic003G281700 Sobic003G281700 Sobic002G299300--Sobic003G281700 Sobic002G299300--Sobic007G067800 Sobic003G214200 Sobic003G214200 Sobic002G299300--Sobic003G214200 Sobic002G337500 Sobic002G337500 Sobic002G299300--Sobic002G337500 Sobic005G158000 Sobic005G158000 Sobic002G299300--Sobic005G158000 Sobic002G013966 Sobic002G013966 Sobic002G299300--Sobic002G013966 Sobic002G299300--Sobic002G153900 Sobic009G016633 Sobic009G016633 Sobic009G142800--Sobic009G016633 Sobic003G344200 Sobic003G344200 Sobic009G142800--Sobic003G344200 Sobic006G206700 Sobic006G206700 Sobic009G142800--Sobic006G206700 Sobic002G198500 Sobic002G198500 Sobic009G142800--Sobic002G198500 Sobic010G185200 Sobic010G185200 Sobic009G142800--Sobic010G185200 Sobic006G086700 Sobic006G086700 Sobic009G142800--Sobic006G086700 Sobic001G442500 Sobic001G442500 Sobic009G142800--Sobic001G442500 Sobic010G115500 Sobic010G115500 Sobic009G142800--Sobic010G115500 Sobic001G128100 Sobic001G128100 Sobic009G142800--Sobic001G128100 Sobic008G014000 Sobic008G014000 Sobic005G094600--Sobic008G014000 Sobic009G198350 Sobic009G198350 Sobic005G094600--Sobic009G198350 Sobic001G261464 Sobic001G261464 Sobic005G094600--Sobic001G261464 Sobic007G048400 Sobic007G048400 Sobic005G094600--Sobic007G048400 Sobic005G094600--Sobic004G358200 Sobic002G322600 Sobic002G322600 Sobic005G094600--Sobic002G322600 Sobic008G139250 Sobic008G139250 Sobic005G094600--Sobic008G139250 Sobic004G243700 Sobic004G243700 Sobic005G094600--Sobic004G243700 Sobic006G241700 Sobic006G241700 Sobic005G094600--Sobic006G241700 Sobic007G196600 Sobic007G196600 Sobic001G461000--Sobic007G196600 Sobic007G168500 Sobic007G168500 Sobic001G461000--Sobic007G168500 Sobic007G145700 Sobic007G145700 Sobic001G461000--Sobic007G145700 Sobic006G265000 Sobic006G265000 Sobic001G461000--Sobic006G265000 Sobic001G343900 Sobic001G343900 Sobic001G461000--Sobic001G343900 Sobic001G314800 Sobic001G314800 Sobic001G461000--Sobic001G314800 Sobic007G044300 Sobic007G044300 Sobic001G461000--Sobic007G044300 Sobic002G373001 Sobic002G373001 Sobic001G461000--Sobic002G373001 Sobic006G044932 Sobic006G044932 Sobic001G461000--Sobic006G044932 Sobic006G099700 Sobic006G099700 Sobic010G165500--Sobic006G099700 Sobic007G088000 Sobic007G088000 Sobic010G165500--Sobic007G088000 Sobic010G083500 Sobic010G083500 Sobic010G165500--Sobic010G083500 Sobic008G077600 Sobic008G077600 Sobic010G165500--Sobic008G077600 Sobic010G232100 Sobic010G232100 Sobic010G165500--Sobic010G232100 Sobic008G025500 Sobic008G025500 Sobic010G165500--Sobic008G025500 Sobic009G129800 Sobic009G129800 Sobic010G165500--Sobic009G129800 Sobic001G357300 Sobic001G357300 Sobic010G165500--Sobic001G357300 Sobic009G180500 Sobic009G180500 Sobic010G165500--Sobic009G180500 Sobic010G019300--Sobic001G357300 Sobic003G410100 Sobic003G410100 Sobic010G019300--Sobic003G410100 Sobic009G135900 Sobic009G135900 Sobic010G019300--Sobic009G135900 Sobic001G301800 Sobic001G301800 Sobic010G019300--Sobic001G301800 Sobic001G407600 Sobic001G407600 Sobic010G019300--Sobic001G407600 Sobic002G339600 Sobic002G339600 Sobic010G019300--Sobic002G339600 Sobic005G026100 Sobic005G026100 Sobic010G019300--Sobic005G026100 Sobic001G339500 Sobic001G339500 Sobic010G019300--Sobic001G339500 Sobic003G369500 Sobic003G369500 Sobic010G019300--Sobic003G369500 Sobic001G216300 Sobic001G216300 Sobic002G233400--Sobic001G216300 Sobic001G051600 Sobic001G051600 Sobic002G233400--Sobic001G051600 Sobic001G489600 Sobic001G489600 Sobic002G233400--Sobic001G489600 Sobic003G186500 Sobic003G186500 Sobic002G233400--Sobic003G186500 Sobic009G257100 Sobic009G257100 Sobic002G233400--Sobic009G257100 Sobic008G159100 Sobic008G159100 Sobic002G233400--Sobic008G159100 Sobic002G427400 Sobic002G427400 Sobic002G233400--Sobic002G427400 Sobic002G233400--Sobic008G077600 Sobic010G212100 Sobic010G212100 Sobic002G233400--Sobic010G212100
Octagon: transcription factors


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