Gene annotation
Transcriptome id Sobic.003G442900.1
Synonym Sb03g047250
Functional annotation expressed protein
UniProt C5XJD1
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os01g73940.1 : expressed protein
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G017800 ubiquitin-conjugating enzyme 28(PubMedID : 26465154)@ubiquitin-conjugating enzyme, putative, expressed K06689: UBE2D, UBC4, ubiquitin-conjugating enzyme E2 D
2 Sobic.010G185500 ethanol tolerance protein GEKO1, putative, expressed K09716: dtdA, D-aminoacyl-tRNA deacylase
3 Sobic.003G206900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@hydrolase, alpha/beta fold family domain containing protein, expressed -
4 Sobic.010G071900 Cinnamyl alcohol dehydrogenase(PubMedID : 28606901)@Cinnamyl alcohol dehydrogenase(PubMedID : 19087955)@a cinnamyl alcohol dehydrogenase (CAD)(PubmedID : 26440083)@dehydrogenase, putative, expressed K00083: cinnamyl-alcohol dehydrogenase
5 Sobic.009G185800 translation initiation factor SUI1, putative, expressed K03113: EIF1, translation initiation factor 1
6 Sobic.010G072000 "s cinnamyl alcohol dehydrogenases, the MYB transcription factor binding domain AACG element"(PubMedID : 24045932)@Cinnamyl alcohol dehydrogenase(PubMedID : 28606901)@Cinnamyl alcohol dehydrogenase(PubMedID : 19087955)@dehydrogenase, putative, expressed K00083: cinnamyl-alcohol dehydrogenase
7 Sobic.008G033600 Pyruvate kinase family protein(PubMedID : 26465154)@pyruvate kinase, putative, expressed K00873: PK, pyruvate kinase
8 Sobic.010G019900 oxidoreductase, aldo/keto reductase family protein, putative, expressed -
9 Sobic.010G178200 hemoglobin-like protein HbO, putative, expressed -
10 Sobic.009G149400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@aminotransferase, classes I and II, domain containing protein, expressed K15849: PAT, bifunctional aspartate aminotransferase and glutamate/aspartate-prephenate aminotransferase
11 Sobic.008G025500 DUF567 domain containing protein, putative, expressed -
12 Sobic.005G038900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
13 Sobic.002G267500 hydrolase, alpha/beta fold family domain containing protein, expressed -
14 Sobic.009G155200 ZOS5-08 - C2H2 zinc finger protein, expressed -
15 Sobic.003G130800 pyruvate kinase, putative, expressed K00873: PK, pyruvate kinase
16 Sobic.002G386800 protein kinase domain containing protein, expressed -
17 Sobic.004G209900 non-receptor tyrosine kinase spore lysis A, putative, expressed -
18 Sobic.001G459200 MYB family transcription factor, putative, expressed -
19 Sobic.002G231900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@purine permease, putative, expressed -
20 Sobic.001G220400 SNF7 domain containing protein, putative, expressed K12192: charged multivesicular body protein 2B


Gene co-expression network
sample Sobic003G442900 Sobic003G442900 Sobic004G017800 Sobic004G017800 Sobic003G442900--Sobic004G017800 Sobic010G185500 Sobic010G185500 Sobic003G442900--Sobic010G185500 Sobic003G206900 Sobic003G206900 Sobic003G442900--Sobic003G206900 Sobic010G071900 Sobic010G071900 Sobic003G442900--Sobic010G071900 Sobic009G185800 Sobic009G185800 Sobic003G442900--Sobic009G185800 Sobic010G072000 Sobic010G072000 Sobic003G442900--Sobic010G072000 Sobic008G033600 Sobic008G033600 Sobic003G442900--Sobic008G033600 Sobic010G019900 Sobic010G019900 Sobic003G442900--Sobic010G019900 Sobic010G178200 Sobic010G178200 Sobic003G442900--Sobic010G178200 Sobic004G017800--Sobic003G442900 Sobic004G209900 Sobic004G209900 Sobic004G017800--Sobic004G209900 Sobic002G204200 Sobic002G204200 Sobic004G017800--Sobic002G204200 Sobic003G117900 Sobic003G117900 Sobic004G017800--Sobic003G117900 Sobic004G017800--Sobic010G185500 Sobic010G042100 Sobic010G042100 Sobic004G017800--Sobic010G042100 Sobic007G216100 Sobic007G216100 Sobic004G017800--Sobic007G216100 Sobic001G220400 Sobic001G220400 Sobic004G017800--Sobic001G220400 Sobic002G199900 Sobic002G199900 Sobic004G017800--Sobic002G199900 Sobic010G185500--Sobic008G033600 Sobic010G185500--Sobic010G071900 Sobic002G264400 Sobic002G264400 Sobic010G185500--Sobic002G264400 Sobic010G185500--Sobic003G206900 Sobic008G189300 Sobic008G189300 Sobic010G185500--Sobic008G189300 Sobic006G264300 Sobic006G264300 Sobic010G185500--Sobic006G264300 Sobic010G185500--Sobic010G019900 Sobic010G243200 Sobic010G243200 Sobic010G185500--Sobic010G243200 Sobic003G228000 Sobic003G228000 Sobic010G185500--Sobic003G228000 Sobic003G206900--Sobic010G071900 Sobic003G240600 Sobic003G240600 Sobic003G206900--Sobic003G240600 Sobic003G206900--Sobic010G019900 Sobic005G038900 Sobic005G038900 Sobic003G206900--Sobic005G038900 Sobic004G304100 Sobic004G304100 Sobic003G206900--Sobic004G304100 Sobic003G206900--Sobic010G185500 Sobic005G092900 Sobic005G092900 Sobic003G206900--Sobic005G092900 Sobic004G107700 Sobic004G107700 Sobic003G206900--Sobic004G107700 Sobic007G148000 Sobic007G148000 Sobic003G206900--Sobic007G148000 Sobic010G071900--Sobic010G072000 Sobic005G213200 Sobic005G213200 Sobic010G071900--Sobic005G213200 Sobic010G071900--Sobic010G185500 Sobic001G100700 Sobic001G100700 Sobic010G071900--Sobic001G100700 Sobic009G120000 Sobic009G120000 Sobic010G071900--Sobic009G120000 Sobic009G106800 Sobic009G106800 Sobic010G071900--Sobic009G106800 Sobic001G319500 Sobic001G319500 Sobic010G071900--Sobic001G319500 Sobic010G071900--Sobic003G206900 Sobic005G084600 Sobic005G084600 Sobic010G071900--Sobic005G084600 Sobic001G459200 Sobic001G459200 Sobic009G185800--Sobic001G459200 Sobic004G049900 Sobic004G049900 Sobic009G185800--Sobic004G049900 Sobic003G253000 Sobic003G253000 Sobic009G185800--Sobic003G253000 Sobic003G130800 Sobic003G130800 Sobic009G185800--Sobic003G130800 Sobic006G108400 Sobic006G108400 Sobic009G185800--Sobic006G108400 Sobic003G350300 Sobic003G350300 Sobic009G185800--Sobic003G350300 Sobic004G330700 Sobic004G330700 Sobic009G185800--Sobic004G330700 Sobic004G272800 Sobic004G272800 Sobic009G185800--Sobic004G272800 Sobic003G181500 Sobic003G181500 Sobic009G185800--Sobic003G181500 Sobic010G072000--Sobic010G071900 Sobic004G277000 Sobic004G277000 Sobic010G072000--Sobic004G277000 Sobic003G075500 Sobic003G075500 Sobic010G072000--Sobic003G075500 Sobic010G072000--Sobic006G264300 Sobic002G180600 Sobic002G180600 Sobic010G072000--Sobic002G180600 Sobic009G003900 Sobic009G003900 Sobic010G072000--Sobic009G003900 Sobic010G072000--Sobic002G264400 Sobic010G072000--Sobic010G185500 Sobic002G267500 Sobic002G267500 Sobic010G072000--Sobic002G267500 Sobic004G055200 Sobic004G055200 Sobic008G033600--Sobic004G055200 Sobic006G173900 Sobic006G173900 Sobic008G033600--Sobic006G173900 Sobic004G187900 Sobic004G187900 Sobic008G033600--Sobic004G187900 Sobic001G281400 Sobic001G281400 Sobic008G033600--Sobic001G281400 Sobic008G033600--Sobic002G267500 Sobic003G377900 Sobic003G377900 Sobic008G033600--Sobic003G377900 Sobic009G008900 Sobic009G008900 Sobic008G033600--Sobic009G008900 Sobic008G033600--Sobic001G459200 Sobic010G149300 Sobic010G149300 Sobic008G033600--Sobic010G149300 Sobic010G099900 Sobic010G099900 Sobic010G019900--Sobic010G099900 Sobic002G261000 Sobic002G261000 Sobic010G019900--Sobic002G261000 Sobic001G119400 Sobic001G119400 Sobic010G019900--Sobic001G119400 Sobic010G009300 Sobic010G009300 Sobic010G019900--Sobic010G009300 Sobic001G499300 Sobic001G499300 Sobic010G019900--Sobic001G499300 Sobic001G177800 Sobic001G177800 Sobic010G019900--Sobic001G177800 Sobic010G117900 Sobic010G117900 Sobic010G019900--Sobic010G117900 Sobic002G187500 Sobic002G187500 Sobic010G019900--Sobic002G187500 Sobic010G019900--Sobic006G173900 Sobic002G345300 Sobic002G345300 Sobic010G178200--Sobic002G345300 Sobic003G285800 Sobic003G285800 Sobic010G178200--Sobic003G285800 Sobic010G178200--Sobic003G350300 Sobic010G041600 Sobic010G041600 Sobic010G178200--Sobic010G041600 Sobic001G034700 Sobic001G034700 Sobic010G178200--Sobic001G034700 Sobic010G178200--Sobic001G281400 Sobic002G046100 Sobic002G046100 Sobic010G178200--Sobic002G046100 Sobic010G274900 Sobic010G274900 Sobic010G178200--Sobic010G274900 Sobic007G087200 Sobic007G087200 Sobic010G178200--Sobic007G087200
Octagon: transcription factors


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