Gene annotation
Transcriptome id Sobic.002G233400.1,Sobic.002G233400.2
Synonym Sb02g027255, UCC2
Functional annotation plastocyanin-like domain containing protein, putative, expressed
UniProt A0A1W0W5F3 , A0A1B6QD14
Pfam PF02298
Panther DB PTHR33021 PTHR33021:SF65
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0009055; electron transfer activity


Orthologs (automatic annotation)
TAIR AT2G32300 : Cupredoxin superfamily protein,uclacyanin 1
RAP-DB (Rice) LOC_Os09g29390.1 : plastocyanin-like domain containing protein, putative, expressed
MaizeGDB (Corn) -
Brachypodium KQK00578 , KQJ90591
Barley HORVU6Hr1G062150.2 , HORVU6Hr1G062150.1 , HORVU6Hr1G062180.1
Wheat TraesCS5A02G248600 , TraesCS7D02G527600
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G216300 glutaredoxin domain containing protein, putative, expressed -
2 Sobic.001G051600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@ATPase, putative, expressed -
3 Sobic.001G489600 expressed protein -
4 Sobic.003G186500 N-rich protein, putative, expressed -
5 Sobic.009G257100 calmodulin-binding protein, putative, expressed -
6 Sobic.008G159100 similar to Calmodulin-2(PubMedID : 29862293)@Ca2+ sensors group(PubMedID : 30367619)@OsCML5 - Calmodulin-related calcium sensor protein, expressed K02183: calmodulin
7 Sobic.002G427400 COBRA-like protein 7 precursor, putative, expressed -
8 Sobic.008G077600 diacylglycerol kinase 1, putative, expressed K00901: dgkA, diacylglycerol kinase (ATP)
9 Sobic.010G212100 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@synthase, putative, expressed K02377: TSTA3, GDP-L-fucose synthase
10 Sobic.001G084000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@WRKY3, expressed -
11 Sobic.005G175300 expressed protein -
12 Sobic.003G337800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@WRKY108, expressed -
13 Sobic.007G196600 proteophosphoglycan ppg4, putative, expressed K13456: RPM1-interacting protein 4
14 Sobic.003G352400 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@C2 domain containing protein, putative, expressed -
15 Sobic.002G344700 remorin, putative, expressed -
16 Sobic.001G314700 uncharacterized Cys-rich domain containing protein, putative, expressed -
17 Sobic.006G205200 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@expressed protein -
18 Sobic.003G109832 - -
19 Sobic.004G311500 "domain confirmed by Pfam database, expression not supported"(PubMedID : 20499123)@OsSAUR12 - Auxin-responsive SAUR gene family member, expressed K14488: SAUR family protein
20 Sobic.001G462800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@protein phosphatase 2C, putative, expressed -


Gene co-expression network
sample Sobic002G233400 Sobic002G233400 Sobic001G216300 Sobic001G216300 Sobic002G233400--Sobic001G216300 Sobic001G051600 Sobic001G051600 Sobic002G233400--Sobic001G051600 Sobic001G489600 Sobic001G489600 Sobic002G233400--Sobic001G489600 Sobic003G186500 Sobic003G186500 Sobic002G233400--Sobic003G186500 Sobic009G257100 Sobic009G257100 Sobic002G233400--Sobic009G257100 Sobic008G159100 Sobic008G159100 Sobic002G233400--Sobic008G159100 Sobic002G427400 Sobic002G427400 Sobic002G233400--Sobic002G427400 Sobic008G077600 Sobic008G077600 Sobic002G233400--Sobic008G077600 Sobic010G212100 Sobic010G212100 Sobic002G233400--Sobic010G212100 Sobic001G314700 Sobic001G314700 Sobic001G216300--Sobic001G314700 Sobic006G205200 Sobic006G205200 Sobic001G216300--Sobic006G205200 Sobic001G161200 Sobic001G161200 Sobic001G216300--Sobic001G161200 Sobic007G196600 Sobic007G196600 Sobic001G216300--Sobic007G196600 Sobic003G352400 Sobic003G352400 Sobic001G216300--Sobic003G352400 Sobic002G185200 Sobic002G185200 Sobic001G216300--Sobic002G185200 Sobic003G337800 Sobic003G337800 Sobic001G216300--Sobic003G337800 Sobic006G146500 Sobic006G146500 Sobic001G216300--Sobic006G146500 Sobic004G006500 Sobic004G006500 Sobic001G216300--Sobic004G006500 Sobic001G051600--Sobic001G489600 Sobic001G476400 Sobic001G476400 Sobic001G051600--Sobic001G476400 Sobic006G095600 Sobic006G095600 Sobic001G051600--Sobic006G095600 Sobic002G203000 Sobic002G203000 Sobic001G051600--Sobic002G203000 Sobic007G057100 Sobic007G057100 Sobic001G051600--Sobic007G057100 Sobic004G051166 Sobic004G051166 Sobic001G051600--Sobic004G051166 Sobic001G051600--Sobic008G159100 Sobic001G081600 Sobic001G081600 Sobic001G051600--Sobic001G081600 Sobic004G025000 Sobic004G025000 Sobic001G051600--Sobic004G025000 Sobic001G489600--Sobic001G051600 Sobic001G489600--Sobic006G095600 Sobic001G077700 Sobic001G077700 Sobic001G489600--Sobic001G077700 Sobic001G489600--Sobic002G203000 Sobic001G489600--Sobic007G057100 Sobic004G280900 Sobic004G280900 Sobic001G489600--Sobic004G280900 Sobic001G489600--Sobic001G476400 Sobic009G071800 Sobic009G071800 Sobic001G489600--Sobic009G071800 Sobic004G286600 Sobic004G286600 Sobic001G489600--Sobic004G286600 Sobic003G186500--Sobic001G051600 Sobic001G462800 Sobic001G462800 Sobic003G186500--Sobic001G462800 Sobic003G186500--Sobic001G489600 Sobic003G186500--Sobic001G081600 Sobic003G186500--Sobic006G095600 Sobic002G294600 Sobic002G294600 Sobic003G186500--Sobic002G294600 Sobic003G186500--Sobic001G476400 Sobic003G186500--Sobic004G025000 Sobic003G186500--Sobic001G314700 Sobic001G095750 Sobic001G095750 Sobic009G257100--Sobic001G095750 Sobic009G257100--Sobic001G161200 Sobic001G044800 Sobic001G044800 Sobic009G257100--Sobic001G044800 Sobic001G314300 Sobic001G314300 Sobic009G257100--Sobic001G314300 Sobic003G131500 Sobic003G131500 Sobic009G257100--Sobic003G131500 Sobic005G087800 Sobic005G087800 Sobic009G257100--Sobic005G087800 Sobic009G257100--Sobic002G185200 Sobic003G109832 Sobic003G109832 Sobic009G257100--Sobic003G109832 Sobic002G160600 Sobic002G160600 Sobic009G257100--Sobic002G160600 Sobic001G063600 Sobic001G063600 Sobic008G159100--Sobic001G063600 Sobic008G159100--Sobic002G427400 Sobic008G000500 Sobic008G000500 Sobic008G159100--Sobic008G000500 Sobic008G159100--Sobic001G051600 Sobic008G159100--Sobic001G476400 Sobic004G264500 Sobic004G264500 Sobic008G159100--Sobic004G264500 Sobic005G231700 Sobic005G231700 Sobic008G159100--Sobic005G231700 Sobic004G245850 Sobic004G245850 Sobic008G159100--Sobic004G245850 Sobic001G080300 Sobic001G080300 Sobic008G159100--Sobic001G080300 Sobic007G166900 Sobic007G166900 Sobic002G427400--Sobic007G166900 Sobic002G427400--Sobic001G080300 Sobic002G427400--Sobic008G159100 Sobic004G278200 Sobic004G278200 Sobic002G427400--Sobic004G278200 Sobic003G373150 Sobic003G373150 Sobic002G427400--Sobic003G373150 Sobic010G006700 Sobic010G006700 Sobic002G427400--Sobic010G006700 Sobic003G225900 Sobic003G225900 Sobic002G427400--Sobic003G225900 Sobic003G032900 Sobic003G032900 Sobic002G427400--Sobic003G032900 Sobic006G267900 Sobic006G267900 Sobic002G427400--Sobic006G267900 Sobic010G165500 Sobic010G165500 Sobic008G077600--Sobic010G165500 Sobic010G232100 Sobic010G232100 Sobic008G077600--Sobic010G232100 Sobic009G258100 Sobic009G258100 Sobic008G077600--Sobic009G258100 Sobic006G099700 Sobic006G099700 Sobic008G077600--Sobic006G099700 Sobic001G143000 Sobic001G143000 Sobic008G077600--Sobic001G143000 Sobic001G450700 Sobic001G450700 Sobic008G077600--Sobic001G450700 Sobic003G238000 Sobic003G238000 Sobic008G077600--Sobic003G238000 Sobic006G178000 Sobic006G178000 Sobic008G077600--Sobic006G178000 Sobic006G261300 Sobic006G261300 Sobic008G077600--Sobic006G261300 Sobic004G276200 Sobic004G276200 Sobic010G212100--Sobic004G276200 Sobic008G014200 Sobic008G014200 Sobic010G212100--Sobic008G014200 Sobic004G073400 Sobic004G073400 Sobic010G212100--Sobic004G073400 Sobic010G212100--Sobic003G109832 Sobic010G212100--Sobic005G087800 Sobic003G078501 Sobic003G078501 Sobic010G212100--Sobic003G078501 Sobic002G189000 Sobic002G189000 Sobic010G212100--Sobic002G189000 Sobic004G017000 Sobic004G017000 Sobic010G212100--Sobic004G017000 Sobic003G233900 Sobic003G233900 Sobic010G212100--Sobic003G233900
Octagon: transcription factors


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