Gene annotation
Transcriptome id Sobic.005G110469.1,Sobic.005G110469.2
Synonym -
Functional annotation -
UniProt C6JRK0 , A0A1Z5RI00 , A0A120GUU8
Pfam -
Panther DB PTHR35290
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os11g21804.1 : expressed protein
MaizeGDB (Corn) Zm00025a029700
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G026600 expressed protein -
2 Sobic.007G058200 - -
3 Sobic.008G008900 staphylococcal nuclease homologue, putative, expressed -
4 Sobic.005G094600 DUF581 domain containing protein, expressed -
5 Sobic.002G323700 syntaxin, putative, expressed K08486: syntaxin 1B/2/3
6 Sobic.008G099600 cysteine-rich receptor-like protein kinase 7 precursor, putative, expressed K04730: interleukin-1 receptor-associated kinase 1
7 Sobic.002G214300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
8 Sobic.005G037300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@transporter, major facilitator family, putative, expressed -
9 Sobic.006G201700 wall-associated kinase 1, putative, expressed -
10 Sobic.003G428800 "basic helix-loop-helix (bHLH) transcription factor, downregulates lignin synthesis in Arabidopisis"(PubMedID : 23698629)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Closest homologue of rice OsIRO2.(PubMedID : 16887895)@helix-loop-helix DNA-binding domain containing protein, expressed -
11 Sobic.004G358200 RING-H2 finger protein, putative, expressed -
12 Sobic.004G059600 DUF581 domain containing protein, expressed -
13 Sobic.001G261464 - -
14 Sobic.003G237600 expressed protein -
15 Sobic.004G243700 - -
16 Sobic.009G254600 hydrolase, alpha/beta fold family domain containing protein, expressed -
17 Sobic.009G069500 histidine-containing phosphotransfer protein 4, putative, expressed K14490: histidine-containing phosphotransfer peotein
18 Sobic.006G026000 - -
19 Sobic.001G260600 expressed protein -
20 Sobic.001G278500 helix-loop-helix DNA-binding domain containing protein, expressed -


Gene co-expression network
sample Sobic005G110469 Sobic005G110469 Sobic006G026600 Sobic006G026600 Sobic005G110469--Sobic006G026600 Sobic007G058200 Sobic007G058200 Sobic005G110469--Sobic007G058200 Sobic008G008900 Sobic008G008900 Sobic005G110469--Sobic008G008900 Sobic005G094600 Sobic005G094600 Sobic005G110469--Sobic005G094600 Sobic002G323700 Sobic002G323700 Sobic005G110469--Sobic002G323700 Sobic008G099600 Sobic008G099600 Sobic005G110469--Sobic008G099600 Sobic002G214300 Sobic002G214300 Sobic005G110469--Sobic002G214300 Sobic005G037300 Sobic005G037300 Sobic005G110469--Sobic005G037300 Sobic006G201700 Sobic006G201700 Sobic005G110469--Sobic006G201700 Sobic009G244300 Sobic009G244300 Sobic006G026600--Sobic009G244300 Sobic006G026600--Sobic002G214300 Sobic003G231800 Sobic003G231800 Sobic006G026600--Sobic003G231800 Sobic006G220800 Sobic006G220800 Sobic006G026600--Sobic006G220800 Sobic007G034300 Sobic007G034300 Sobic006G026600--Sobic007G034300 Sobic009G190500 Sobic009G190500 Sobic006G026600--Sobic009G190500 Sobic004G267000 Sobic004G267000 Sobic006G026600--Sobic004G267000 Sobic005G016500 Sobic005G016500 Sobic006G026600--Sobic005G016500 Sobic009G244600 Sobic009G244600 Sobic006G026600--Sobic009G244600 Sobic001G297400 Sobic001G297400 Sobic007G058200--Sobic001G297400 Sobic001G098600 Sobic001G098600 Sobic007G058200--Sobic001G098600 Sobic003G237600 Sobic003G237600 Sobic007G058200--Sobic003G237600 Sobic007G058200--Sobic005G037300 Sobic009G254600 Sobic009G254600 Sobic007G058200--Sobic009G254600 Sobic004G035700 Sobic004G035700 Sobic007G058200--Sobic004G035700 Sobic001G068400 Sobic001G068400 Sobic007G058200--Sobic001G068400 Sobic001G189100 Sobic001G189100 Sobic007G058200--Sobic001G189100 Sobic008G008900--Sobic005G110469 Sobic007G067800 Sobic007G067800 Sobic008G008900--Sobic007G067800 Sobic002G299300 Sobic002G299300 Sobic008G008900--Sobic002G299300 Sobic009G142800 Sobic009G142800 Sobic008G008900--Sobic009G142800 Sobic008G008900--Sobic005G094600 Sobic001G461000 Sobic001G461000 Sobic008G008900--Sobic001G461000 Sobic010G165500 Sobic010G165500 Sobic008G008900--Sobic010G165500 Sobic010G019300 Sobic010G019300 Sobic008G008900--Sobic010G019300 Sobic002G233400 Sobic002G233400 Sobic008G008900--Sobic002G233400 Sobic008G014000 Sobic008G014000 Sobic005G094600--Sobic008G014000 Sobic009G198350 Sobic009G198350 Sobic005G094600--Sobic009G198350 Sobic001G261464 Sobic001G261464 Sobic005G094600--Sobic001G261464 Sobic007G048400 Sobic007G048400 Sobic005G094600--Sobic007G048400 Sobic004G358200 Sobic004G358200 Sobic005G094600--Sobic004G358200 Sobic002G322600 Sobic002G322600 Sobic005G094600--Sobic002G322600 Sobic008G139250 Sobic008G139250 Sobic005G094600--Sobic008G139250 Sobic004G243700 Sobic004G243700 Sobic005G094600--Sobic004G243700 Sobic006G241700 Sobic006G241700 Sobic005G094600--Sobic006G241700 Sobic010G226600 Sobic010G226600 Sobic002G323700--Sobic010G226600 Sobic001G439200 Sobic001G439200 Sobic002G323700--Sobic001G439200 Sobic003G266500 Sobic003G266500 Sobic002G323700--Sobic003G266500 Sobic002G323700--Sobic002G214300 Sobic002G323700--Sobic007G058200 Sobic002G323700--Sobic006G026600 Sobic008G104601 Sobic008G104601 Sobic002G323700--Sobic008G104601 Sobic001G302200 Sobic001G302200 Sobic002G323700--Sobic001G302200 Sobic004G073500 Sobic004G073500 Sobic002G323700--Sobic004G073500 Sobic001G278500 Sobic001G278500 Sobic008G099600--Sobic001G278500 Sobic005G069000 Sobic005G069000 Sobic008G099600--Sobic005G069000 Sobic001G327900 Sobic001G327900 Sobic008G099600--Sobic001G327900 Sobic008G099232 Sobic008G099232 Sobic008G099600--Sobic008G099232 Sobic008G099600--Sobic006G201700 Sobic008G099300 Sobic008G099300 Sobic008G099600--Sobic008G099300 Sobic003G428800 Sobic003G428800 Sobic008G099600--Sobic003G428800 Sobic009G225800 Sobic009G225800 Sobic008G099600--Sobic009G225800 Sobic008G079800 Sobic008G079800 Sobic008G099600--Sobic008G079800 Sobic004G353700 Sobic004G353700 Sobic002G214300--Sobic004G353700 Sobic001G406000 Sobic001G406000 Sobic002G214300--Sobic001G406000 Sobic003G234400 Sobic003G234400 Sobic002G214300--Sobic003G234400 Sobic007G189700 Sobic007G189700 Sobic002G214300--Sobic007G189700 Sobic002G214300--Sobic003G237600 Sobic002G214300--Sobic003G231800 Sobic003G036100 Sobic003G036100 Sobic002G214300--Sobic003G036100 Sobic002G214300--Sobic001G189100 Sobic001G355600 Sobic001G355600 Sobic005G037300--Sobic001G355600 Sobic005G037300--Sobic003G237600 Sobic005G037300--Sobic007G058200 Sobic005G037300--Sobic001G189100 Sobic008G106200 Sobic008G106200 Sobic005G037300--Sobic008G106200 Sobic005G037300--Sobic003G428800 Sobic009G222200 Sobic009G222200 Sobic005G037300--Sobic009G222200 Sobic005G037300--Sobic001G098600 Sobic006G201700--Sobic008G099600 Sobic010G015800 Sobic010G015800 Sobic006G201700--Sobic010G015800 Sobic006G021900 Sobic006G021900 Sobic006G201700--Sobic006G021900 Sobic007G089900 Sobic007G089900 Sobic006G201700--Sobic007G089900 Sobic010G122200 Sobic010G122200 Sobic006G201700--Sobic010G122200 Sobic005G154100 Sobic005G154100 Sobic006G201700--Sobic005G154100 Sobic006G201700--Sobic009G190500 Sobic002G067300 Sobic002G067300 Sobic006G201700--Sobic002G067300 Sobic004G323900 Sobic004G323900 Sobic006G201700--Sobic004G323900
Octagon: transcription factors


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