Gene annotation
Transcriptome id Sobic.008G097100.1
Synonym Sb08g014640
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
hydrolase, alpha/beta fold family domain containing protein, expressed
UniProt C5YNP8
Pfam PF12697
Panther DB PTHR10992 PTHR10992:SF845
NCBI CDD KOG4178; Soluble epoxide hydrolase
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G02340 : alpha/beta-Hydrolases superfamily protein
RAP-DB (Rice) LOC_Os05g19150.1 : hydrolase, alpha/beta fold family domain containing protein, expressed
MaizeGDB (Corn) Zm00025a054115
Brachypodium KQK18499
Barley HORVU7Hr1G045640.2
Wheat TraesCS7A02G222400 , TraesCS7B02G129100
Populus -


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cDNA sequences
Sobic.008G097100


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G267500 hydrolase, alpha/beta fold family domain containing protein, expressed -
2 Sobic.003G253000 ubiquitin-conjugating enzyme, putative, expressed K10580: UBE2N, BLU, ubiquitin-conjugating enzyme E2 N
3 Sobic.004G272800 VHS and GAT domain containing protein, expressed -
4 Sobic.004G049900 ubiquitin family protein, putative, expressed K08770: ubiquitin C
K08770: ubiquitin C
K04551: ubiquitin B
5 Sobic.002G126600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@cytochrome P450, putative, expressed K00487: trans-cinnamate 4-monooxygenase
6 Sobic.006G204300 Trihelix Family(PubMedID : 24864043)@SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@transcription factor TF2, putative, expressed -
7 Sobic.007G195100 peptidase, T1 family, putative, expressed K02732: 20S proteasome subunit beta 6
8 Sobic.004G050000 ubiquitin family protein, putative, expressed K08770: ubiquitin C
K08770: ubiquitin C
K04551: ubiquitin B
9 Sobic.002G345300 ZOS7-05 - C2H2 zinc finger protein, expressed -
10 Sobic.001G082400 cytochrome P450, putative, expressed -
11 Sobic.003G130800 pyruvate kinase, putative, expressed K00873: PK, pyruvate kinase
12 Sobic.002G264400 metallo-beta-lactamase family protein, putative, expressed K01069: gloB, gloC, hydroxyacylglutathione hydrolase
13 Sobic.009G143400 chitin-inducible gibberellin-responsive protein, putative, expressed -
14 Sobic.003G386000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@kinase, pfkB family, putative, expressed K00847: E2.7.1.4, fructokinase
15 Sobic.009G043600 glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
16 Sobic.002G180600 expressed protein K17968: TRIAP1, TRIAP1/MDM35 family protein
17 Sobic.002G046100 zinc finger A20 and AN1 domain-containing stress-associated protein, putative, expressed -
18 Sobic.004G058000 VQ domain containing protein, putative, expressed -
19 Sobic.002G202300 vesicle transport v-SNARE protein, putative, expressed K08495: GOSR1, golgi SNAP receptor complex member 1
20 Sobic.006G108400 14-3-3 protein, putative, expressed K06630: 14-3-3 protein epsilon


Gene co-expression network
sample Sobic008G097100 Sobic008G097100 Sobic002G267500 Sobic002G267500 Sobic008G097100--Sobic002G267500 Sobic003G253000 Sobic003G253000 Sobic008G097100--Sobic003G253000 Sobic004G272800 Sobic004G272800 Sobic008G097100--Sobic004G272800 Sobic004G049900 Sobic004G049900 Sobic008G097100--Sobic004G049900 Sobic002G126600 Sobic002G126600 Sobic008G097100--Sobic002G126600 Sobic006G204300 Sobic006G204300 Sobic008G097100--Sobic006G204300 Sobic007G195100 Sobic007G195100 Sobic008G097100--Sobic007G195100 Sobic004G050000 Sobic004G050000 Sobic008G097100--Sobic004G050000 Sobic002G345300 Sobic002G345300 Sobic008G097100--Sobic002G345300 Sobic001G281400 Sobic001G281400 Sobic002G267500--Sobic001G281400 Sobic002G267500--Sobic004G272800 Sobic002G046100 Sobic002G046100 Sobic002G267500--Sobic002G046100 Sobic002G267500--Sobic003G253000 Sobic010G149300 Sobic010G149300 Sobic002G267500--Sobic010G149300 Sobic002G267500--Sobic002G345300 Sobic001G459200 Sobic001G459200 Sobic002G267500--Sobic001G459200 Sobic009G143400 Sobic009G143400 Sobic002G267500--Sobic009G143400 Sobic006G173900 Sobic006G173900 Sobic002G267500--Sobic006G173900 Sobic006G141500 Sobic006G141500 Sobic003G253000--Sobic006G141500 Sobic003G253000--Sobic004G049900 Sobic003G253000--Sobic002G267500 Sobic003G253000--Sobic004G272800 Sobic003G253000--Sobic001G459200 Sobic003G253000--Sobic002G345300 Sobic003G253000--Sobic002G046100 Sobic009G185800 Sobic009G185800 Sobic003G253000--Sobic009G185800 Sobic006G108400 Sobic006G108400 Sobic003G253000--Sobic006G108400 Sobic004G272800--Sobic002G267500 Sobic004G272800--Sobic001G281400 Sobic004G272800--Sobic003G253000 Sobic001G048832 Sobic001G048832 Sobic004G272800--Sobic001G048832 Sobic002G190900 Sobic002G190900 Sobic004G272800--Sobic002G190900 Sobic004G272800--Sobic002G345300 Sobic004G272800--Sobic002G046100 Sobic010G041600 Sobic010G041600 Sobic004G272800--Sobic010G041600 Sobic005G188100 Sobic005G188100 Sobic004G272800--Sobic005G188100 Sobic004G049900--Sobic003G253000 Sobic004G049900--Sobic009G185800 Sobic004G049900--Sobic006G108400 Sobic003G130800 Sobic003G130800 Sobic004G049900--Sobic003G130800 Sobic004G049900--Sobic001G459200 Sobic004G049900--Sobic004G050000 Sobic001G415500 Sobic001G415500 Sobic004G049900--Sobic001G415500 Sobic004G049900--Sobic002G267500 Sobic004G049900--Sobic001G281400 Sobic002G126600--Sobic004G272800 Sobic002G153500 Sobic002G153500 Sobic002G126600--Sobic002G153500 Sobic003G386000 Sobic003G386000 Sobic002G126600--Sobic003G386000 Sobic010G239500 Sobic010G239500 Sobic002G126600--Sobic010G239500 Sobic009G149400 Sobic009G149400 Sobic002G126600--Sobic009G149400 Sobic002G126600--Sobic001G281400 Sobic002G204100 Sobic002G204100 Sobic002G126600--Sobic002G204100 Sobic008G032100 Sobic008G032100 Sobic002G126600--Sobic008G032100 Sobic002G126600--Sobic003G253000 Sobic006G204300--Sobic002G046100 Sobic001G025300 Sobic001G025300 Sobic006G204300--Sobic001G025300 Sobic006G204300--Sobic002G267500 Sobic002G183200 Sobic002G183200 Sobic006G204300--Sobic002G183200 Sobic002G282400 Sobic002G282400 Sobic006G204300--Sobic002G282400 Sobic007G107000 Sobic007G107000 Sobic006G204300--Sobic007G107000 Sobic006G204300--Sobic009G143400 Sobic004G144500 Sobic004G144500 Sobic006G204300--Sobic004G144500 Sobic006G204300--Sobic002G345300 Sobic003G333400 Sobic003G333400 Sobic007G195100--Sobic003G333400 Sobic003G367451 Sobic003G367451 Sobic007G195100--Sobic003G367451 Sobic002G296300 Sobic002G296300 Sobic007G195100--Sobic002G296300 Sobic007G195100--Sobic004G050000 Sobic001G403700 Sobic001G403700 Sobic007G195100--Sobic001G403700 Sobic009G111600 Sobic009G111600 Sobic007G195100--Sobic009G111600 Sobic002G159300 Sobic002G159300 Sobic007G195100--Sobic002G159300 Sobic003G323600 Sobic003G323600 Sobic007G195100--Sobic003G323600 Sobic001G132100 Sobic001G132100 Sobic007G195100--Sobic001G132100 Sobic009G043600 Sobic009G043600 Sobic004G050000--Sobic009G043600 Sobic001G066000 Sobic001G066000 Sobic004G050000--Sobic001G066000 Sobic004G050000--Sobic004G049900 Sobic004G277000 Sobic004G277000 Sobic004G050000--Sobic004G277000 Sobic004G050000--Sobic002G267500 Sobic006G121500 Sobic006G121500 Sobic004G050000--Sobic006G121500 Sobic002G090200 Sobic002G090200 Sobic004G050000--Sobic002G090200 Sobic009G177800 Sobic009G177800 Sobic004G050000--Sobic009G177800 Sobic004G050000--Sobic006G108400 Sobic002G345300--Sobic002G046100 Sobic003G350300 Sobic003G350300 Sobic002G345300--Sobic003G350300 Sobic002G345300--Sobic001G281400 Sobic010G178200 Sobic010G178200 Sobic002G345300--Sobic010G178200 Sobic002G345300--Sobic002G267500 Sobic002G345300--Sobic003G253000 Sobic003G285800 Sobic003G285800 Sobic002G345300--Sobic003G285800 Sobic002G345300--Sobic004G272800 Sobic002G345300--Sobic010G149300
Octagon: transcription factors


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