Gene annotation
Transcriptome id Sobic.009G011400.1
Synonym Sb09g001170
Functional annotation rab5-interacting protein like, putative, expressed
UniProt C5YYG9
Pfam PF07019
Panther DB PTHR12906
NCBI CDD KOG3415; Putative Rab5-interacting protein
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G59410 : Rab5-interacting family protein
RAP-DB (Rice) LOC_Os05g01994.1 : rab5-interacting protein like, putative, expressed
MaizeGDB (Corn) Zm00025a040949
Brachypodium -
Barley -
Wheat TraesCS3D02G533800
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G005900 PPR repeat domain containing protein, putative, expressed -
2 Sobic.004G224900 peptidase, T1 family, putative, expressed K02726: 20S proteasome subunit alpha 2
3 Sobic.009G198500 ras-related protein, putative, expressed K07897: Ras-related protein Rab-7A
4 Sobic.001G502200 peptidase, T1 family, putative, expressed K02729: 20S proteasome subunit alpha 5
5 Sobic.002G078400 ADP-ribosylation factor, putative, expressed K07937: ADP-ribosylation factor 1/2
K07977: Arf/Sar family, other
6 Sobic.001G315500 ethylene-responsive element-binding protein, putative, expressed -
7 Sobic.004G225500 bolA, putative, expressed K05527: BolA family transcriptional regulator, general stress-responsive regulator
8 Sobic.001G025600 huntingtin-interacting protein HYPK, putative, expressed -
9 Sobic.003G124800 26S proteasome non-ATPase regulatory subunit 14, putative, expressed K03030: PSMD14, RPN11, 26S proteasome regulatory subunit N11
10 Sobic.001G501200 ras-related protein, putative, expressed K07889: Ras-related protein Rab-5C
11 Sobic.006G150600 hydrolase, putative, expressed K14664: IAA-amino acid hydrolase
12 Sobic.001G236300 cell division control protein 48 homolog E, putative, expressed K13525: VCP, transitional endoplasmic reticulum ATPase
13 Sobic.001G364500 peptide methionine sulfoxide reductase msrB, putative, expressed K07305: peptide-methionine (R)-S-oxide reductase
14 Sobic.006G002700 OsRhmbd10 - Putative Rhomboid homologue, expressed -
15 Sobic.004G300900 OsGrx_C3 - glutaredoxin subgroup I, expressed K03676: grxC, GLRX, glutaredoxin 3
16 Sobic.002G406200 expressed protein -
17 Sobic.008G058300 RNA polymerases N 8 kDa subunit, putative, expressed K03007: RPB10, DNA-directed RNA polymerases I, II, and III subunit RPABC5
18 Sobic.004G272300 expressed protein -
19 Sobic.007G096700 POEI30 - Pollen Ole e I allergen and extensin family protein precursor, expressed -
20 Sobic.001G428100 S-RNase-binding protein, putative, expressed K19042: E3 ubiquitin-protein ligase BOI and related proteins


Gene co-expression network
sample Sobic009G011400 Sobic009G011400 Sobic001G005900 Sobic001G005900 Sobic009G011400--Sobic001G005900 Sobic004G224900 Sobic004G224900 Sobic009G011400--Sobic004G224900 Sobic009G198500 Sobic009G198500 Sobic009G011400--Sobic009G198500 Sobic001G502200 Sobic001G502200 Sobic009G011400--Sobic001G502200 Sobic002G078400 Sobic002G078400 Sobic009G011400--Sobic002G078400 Sobic001G315500 Sobic001G315500 Sobic009G011400--Sobic001G315500 Sobic004G225500 Sobic004G225500 Sobic009G011400--Sobic004G225500 Sobic001G025600 Sobic001G025600 Sobic009G011400--Sobic001G025600 Sobic003G124800 Sobic003G124800 Sobic009G011400--Sobic003G124800 Sobic001G005900--Sobic009G198500 Sobic004G327300 Sobic004G327300 Sobic001G005900--Sobic004G327300 Sobic004G300900 Sobic004G300900 Sobic001G005900--Sobic004G300900 Sobic001G048832 Sobic001G048832 Sobic001G005900--Sobic001G048832 Sobic001G005900--Sobic002G078400 Sobic001G005900--Sobic001G502200 Sobic004G130900 Sobic004G130900 Sobic001G005900--Sobic004G130900 Sobic007G096700 Sobic007G096700 Sobic001G005900--Sobic007G096700 Sobic001G501200 Sobic001G501200 Sobic001G005900--Sobic001G501200 Sobic003G330500 Sobic003G330500 Sobic004G224900--Sobic003G330500 Sobic006G252200 Sobic006G252200 Sobic004G224900--Sobic006G252200 Sobic007G176200 Sobic007G176200 Sobic004G224900--Sobic007G176200 Sobic004G138800 Sobic004G138800 Sobic004G224900--Sobic004G138800 Sobic007G076300 Sobic007G076300 Sobic004G224900--Sobic007G076300 Sobic001G481700 Sobic001G481700 Sobic004G224900--Sobic001G481700 Sobic004G224900--Sobic001G502200 Sobic001G458700 Sobic001G458700 Sobic004G224900--Sobic001G458700 Sobic001G236300 Sobic001G236300 Sobic004G224900--Sobic001G236300 Sobic004G272300 Sobic004G272300 Sobic009G198500--Sobic004G272300 Sobic009G198500--Sobic003G124800 Sobic002G400000 Sobic002G400000 Sobic009G198500--Sobic002G400000 Sobic007G168600 Sobic007G168600 Sobic009G198500--Sobic007G168600 Sobic009G198500--Sobic002G078400 Sobic009G198500--Sobic004G300900 Sobic009G198500--Sobic001G005900 Sobic009G198500--Sobic007G096700 Sobic006G212100 Sobic006G212100 Sobic009G198500--Sobic006G212100 Sobic001G502200--Sobic001G315500 Sobic001G502200--Sobic007G168600 Sobic001G502200--Sobic004G224900 Sobic001G502200--Sobic003G124800 Sobic001G502200--Sobic001G458700 Sobic001G502200--Sobic003G330500 Sobic002G428200 Sobic002G428200 Sobic001G502200--Sobic002G428200 Sobic001G502200--Sobic002G078400 Sobic001G502200--Sobic006G252200 Sobic002G078400--Sobic004G300900 Sobic010G065400 Sobic010G065400 Sobic002G078400--Sobic010G065400 Sobic003G362400 Sobic003G362400 Sobic002G078400--Sobic003G362400 Sobic007G091000 Sobic007G091000 Sobic002G078400--Sobic007G091000 Sobic008G132800 Sobic008G132800 Sobic002G078400--Sobic008G132800 Sobic001G445800 Sobic001G445800 Sobic002G078400--Sobic001G445800 Sobic001G331900 Sobic001G331900 Sobic002G078400--Sobic001G331900 Sobic002G078400--Sobic009G198500 Sobic010G029400 Sobic010G029400 Sobic002G078400--Sobic010G029400 Sobic001G315500--Sobic001G502200 Sobic001G315500--Sobic003G124800 Sobic001G315500--Sobic010G065400 Sobic008G137600 Sobic008G137600 Sobic001G315500--Sobic008G137600 Sobic001G315500--Sobic004G224900 Sobic001G315500--Sobic002G428200 Sobic001G315500--Sobic006G252200 Sobic001G315500--Sobic003G330500 Sobic001G315500--Sobic003G362400 Sobic008G189300 Sobic008G189300 Sobic004G225500--Sobic008G189300 Sobic002G155500 Sobic002G155500 Sobic004G225500--Sobic002G155500 Sobic004G272800 Sobic004G272800 Sobic004G225500--Sobic004G272800 Sobic004G225500--Sobic004G300900 Sobic004G225500--Sobic001G048832 Sobic001G340500 Sobic001G340500 Sobic004G225500--Sobic001G340500 Sobic002G153500 Sobic002G153500 Sobic004G225500--Sobic002G153500 Sobic010G154700 Sobic010G154700 Sobic004G225500--Sobic010G154700 Sobic010G121300 Sobic010G121300 Sobic004G225500--Sobic010G121300 Sobic004G103700 Sobic004G103700 Sobic001G025600--Sobic004G103700 Sobic001G172000 Sobic001G172000 Sobic001G025600--Sobic001G172000 Sobic001G025600--Sobic001G481700 Sobic003G129800 Sobic003G129800 Sobic001G025600--Sobic003G129800 Sobic001G513500 Sobic001G513500 Sobic001G025600--Sobic001G513500 Sobic003G442400 Sobic003G442400 Sobic001G025600--Sobic003G442400 Sobic001G025600--Sobic004G224900 Sobic001G018800 Sobic001G018800 Sobic001G025600--Sobic001G018800 Sobic003G287300 Sobic003G287300 Sobic001G025600--Sobic003G287300 Sobic003G124800--Sobic009G198500 Sobic001G439600 Sobic001G439600 Sobic003G124800--Sobic001G439600 Sobic006G232200 Sobic006G232200 Sobic003G124800--Sobic006G232200 Sobic003G124800--Sobic001G502200 Sobic007G045600 Sobic007G045600 Sobic003G124800--Sobic007G045600 Sobic001G529000 Sobic001G529000 Sobic003G124800--Sobic001G529000 Sobic003G124800--Sobic007G168600 Sobic006G150600 Sobic006G150600 Sobic003G124800--Sobic006G150600 Sobic004G066800 Sobic004G066800 Sobic003G124800--Sobic004G066800
Octagon: transcription factors


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