Gene annotation
Transcriptome id Sobic.009G049500.2,Sobic.009G049500.1
Synonym TPR3, Sb09g004210
Functional annotation NB-ARC domain containing protein, expressed
UniProt C5Z0I1 , A0A1Z5R260
Pfam PF00931
Panther DB PTHR23155 PTHR23155:SF541
NCBI CDD KOG4658; Apoptotic ATPase
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G16830 : TOPLESS-related 3,TOPLESS-related 2
RAP-DB (Rice) LOC_Os05g15040.2,LOC_Os05g15040.1 : NB-ARC domain containing protein, expressed
MaizeGDB (Corn) Zm00025a055098 , Zm00025a006197
Brachypodium KQJ95284
Barley HORVU7Hr1G066930.11 , HORVU7Hr1G066930.10 , HORVU7Hr1G066930.13 , HORVU7Hr1G066930.14 , HORVU6Hr1G028220.2 , HORVU6Hr1G028220.3 , HORVU6Hr1G028220.1 , HORVU6Hr1G028220.6 , HORVU6Hr1G028220.4 , HORVU6Hr1G028220.5 , HORVU7Hr1G066930.5 , HORVU7Hr1G066930.4 , HORVU7Hr1G066930.7 , HORVU7Hr1G066930.6 , HORVU7Hr1G066930.1 , HORVU7Hr1G066930.3 , HORVU7Hr1G066930.9
Wheat TraesCS7B02G462600 , TraesCS2A02G564600 , TraesCS7D02G293500 , TraesCS7D02G293500 , TraesCS2D02G575000 , TraesCS2B02G625400 , TraesCS7B02G189300 , TraesCS7B02G189300 , TraesCS7B02G189300 , TraesCS7A02G296100 , TraesCS7A02G296100 , TraesCS7A02G296100 , TraesCS7A02G296100 , TraesCS7A02G296100 , TraesCS7B02G459900 , TraesCS2B02G625500 , TraesCS2B02G038800
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G170400 "CYP711A family, the cytochrome P450 homepage. Its recombinant protein did not converted CLA to 5DS or 5DS to hydroxylated 5DS."(PubMedID : 33793911)@Synthesized carlactonoic acid (CLA) from carlactone (CL).(PubMedID : 34970291)@cytochrome P450, putative, expressed -
2 Sobic.005G224700 Myb domain protein 11 1(PubMedID : 26320239)@MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
3 Sobic.002G350600 HEAT repeat family protein, putative, expressed -
4 Sobic.005G092000 resistance protein, putative, expressed -
5 Sobic.010G123400 GRAM and C2 domains containing protein, putative, expressed -
6 Sobic.009G016633 - K09422: transcription factor MYB, plant
7 Sobic.002G081800 RGH1A, putative, expressed -
8 Sobic.001G312900 transporter family protein, putative, expressed -
9 Sobic.003G331400 expressed protein -
10 Sobic.006G173700 copper-transporting ATPase 3, putative, expressed K17686: copA, ctpA, P-type Cu+ transporter
11 Sobic.009G033100 OsWAK4 - OsWAK receptor-like cytoplasmic kinase OsWAK-RLCK, expressed -
12 Sobic.004G103400 verticillium wilt disease resistance protein, putative, expressed -
13 Sobic.003G192600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@receptor-like kinase ARK1AS, putative, expressed -
14 Sobic.002G427300 protein phosphotase protein, putative, expressed -
15 Sobic.003G273600 CK1_CaseinKinase_1.3 - CK1 includes the casein kinase 1 kinases, expressed K02218: CSNK1, casein kinase 1
16 Sobic.008G002000 phospholipase C, putative, expressed K05857: phosphatidylinositol phospholipase C, delta
17 Sobic.008G003700 clathrin heavy chain, putative, expressed K04646: clathrin heavy chain
18 Sobic.008G088830 - -
19 Sobic.003G194100 mitochondrial carrier protein, putative, expressed K15084: SLC25A16, GDA, solute carrier family 25 (mitochondrial carrier protein), member 16
20 Sobic.003G372800 expressed protein -


Gene co-expression network
sample Sobic009G049500 Sobic009G049500 Sobic010G170400 Sobic010G170400 Sobic009G049500--Sobic010G170400 Sobic005G224700 Sobic005G224700 Sobic009G049500--Sobic005G224700 Sobic002G350600 Sobic002G350600 Sobic009G049500--Sobic002G350600 Sobic005G092000 Sobic005G092000 Sobic009G049500--Sobic005G092000 Sobic010G123400 Sobic010G123400 Sobic009G049500--Sobic010G123400 Sobic009G016633 Sobic009G016633 Sobic009G049500--Sobic009G016633 Sobic002G081800 Sobic002G081800 Sobic009G049500--Sobic002G081800 Sobic001G312900 Sobic001G312900 Sobic009G049500--Sobic001G312900 Sobic003G331400 Sobic003G331400 Sobic009G049500--Sobic003G331400 Sobic010G170400--Sobic005G092000 Sobic004G337900 Sobic004G337900 Sobic010G170400--Sobic004G337900 Sobic004G257800 Sobic004G257800 Sobic010G170400--Sobic004G257800 Sobic009G099000 Sobic009G099000 Sobic010G170400--Sobic009G099000 Sobic003G278700 Sobic003G278700 Sobic010G170400--Sobic003G278700 Sobic010G170400--Sobic009G049500 Sobic004G172100 Sobic004G172100 Sobic010G170400--Sobic004G172100 Sobic006G156600 Sobic006G156600 Sobic010G170400--Sobic006G156600 Sobic003G252500 Sobic003G252500 Sobic010G170400--Sobic003G252500 Sobic006G173700 Sobic006G173700 Sobic005G224700--Sobic006G173700 Sobic005G224700--Sobic009G049500 Sobic009G033100 Sobic009G033100 Sobic005G224700--Sobic009G033100 Sobic002G120300 Sobic002G120300 Sobic005G224700--Sobic002G120300 Sobic004G323900 Sobic004G323900 Sobic005G224700--Sobic004G323900 Sobic006G000600 Sobic006G000600 Sobic005G224700--Sobic006G000600 Sobic005G224700--Sobic002G081800 Sobic007G208900 Sobic007G208900 Sobic005G224700--Sobic007G208900 Sobic004G073500 Sobic004G073500 Sobic005G224700--Sobic004G073500 Sobic006G280000 Sobic006G280000 Sobic002G350600--Sobic006G280000 Sobic008G135200 Sobic008G135200 Sobic002G350600--Sobic008G135200 Sobic001G251100 Sobic001G251100 Sobic002G350600--Sobic001G251100 Sobic007G054800 Sobic007G054800 Sobic002G350600--Sobic007G054800 Sobic003G104000 Sobic003G104000 Sobic002G350600--Sobic003G104000 Sobic004G040900 Sobic004G040900 Sobic002G350600--Sobic004G040900 Sobic002G350600--Sobic001G312900 Sobic002G294800 Sobic002G294800 Sobic002G350600--Sobic002G294800 Sobic001G362200 Sobic001G362200 Sobic002G350600--Sobic001G362200 Sobic010G035900 Sobic010G035900 Sobic005G092000--Sobic010G035900 Sobic005G092000--Sobic002G081800 Sobic005G022200 Sobic005G022200 Sobic005G092000--Sobic005G022200 Sobic002G081850 Sobic002G081850 Sobic005G092000--Sobic002G081850 Sobic007G172500 Sobic007G172500 Sobic005G092000--Sobic007G172500 Sobic002G167000 Sobic002G167000 Sobic005G092000--Sobic002G167000 Sobic005G092000--Sobic004G172100 Sobic004G339800 Sobic004G339800 Sobic005G092000--Sobic004G339800 Sobic007G009500 Sobic007G009500 Sobic005G092000--Sobic007G009500 Sobic003G273600 Sobic003G273600 Sobic010G123400--Sobic003G273600 Sobic002G166300 Sobic002G166300 Sobic010G123400--Sobic002G166300 Sobic003G376400 Sobic003G376400 Sobic010G123400--Sobic003G376400 Sobic002G339500 Sobic002G339500 Sobic010G123400--Sobic002G339500 Sobic006G222100 Sobic006G222100 Sobic010G123400--Sobic006G222100 Sobic003G233600 Sobic003G233600 Sobic010G123400--Sobic003G233600 Sobic009G017400 Sobic009G017400 Sobic010G123400--Sobic009G017400 Sobic001G079200 Sobic001G079200 Sobic010G123400--Sobic001G079200 Sobic010G084000 Sobic010G084000 Sobic010G123400--Sobic010G084000 Sobic009G142800 Sobic009G142800 Sobic009G016633--Sobic009G142800 Sobic004G174900 Sobic004G174900 Sobic009G016633--Sobic004G174900 Sobic010G063100 Sobic010G063100 Sobic009G016633--Sobic010G063100 Sobic003G344200 Sobic003G344200 Sobic009G016633--Sobic003G344200 Sobic010G068500 Sobic010G068500 Sobic009G016633--Sobic010G068500 Sobic006G002900 Sobic006G002900 Sobic009G016633--Sobic006G002900 Sobic010G115500 Sobic010G115500 Sobic009G016633--Sobic010G115500 Sobic003G035100 Sobic003G035100 Sobic009G016633--Sobic003G035100 Sobic001G351100 Sobic001G351100 Sobic009G016633--Sobic001G351100 Sobic002G081800--Sobic002G081850 Sobic002G081800--Sobic005G022200 Sobic005G110511 Sobic005G110511 Sobic002G081800--Sobic005G110511 Sobic005G066366 Sobic005G066366 Sobic002G081800--Sobic005G066366 Sobic010G242800 Sobic010G242800 Sobic002G081800--Sobic010G242800 Sobic005G197350 Sobic005G197350 Sobic002G081800--Sobic005G197350 Sobic003G161400 Sobic003G161400 Sobic002G081800--Sobic003G161400 Sobic005G066500 Sobic005G066500 Sobic002G081800--Sobic005G066500 Sobic002G081800--Sobic004G339800 Sobic001G312900--Sobic001G362200 Sobic003G109700 Sobic003G109700 Sobic001G312900--Sobic003G109700 Sobic002G134600 Sobic002G134600 Sobic001G312900--Sobic002G134600 Sobic004G004300 Sobic004G004300 Sobic001G312900--Sobic004G004300 Sobic001G312900--Sobic002G350600 Sobic001G312900--Sobic006G280000 Sobic009G042700 Sobic009G042700 Sobic001G312900--Sobic009G042700 Sobic006G052500 Sobic006G052500 Sobic001G312900--Sobic006G052500 Sobic001G312900--Sobic003G331400 Sobic004G344901 Sobic004G344901 Sobic003G331400--Sobic004G344901 Sobic002G137400 Sobic002G137400 Sobic003G331400--Sobic002G137400 Sobic001G415300 Sobic001G415300 Sobic003G331400--Sobic001G415300 Sobic004G358400 Sobic004G358400 Sobic003G331400--Sobic004G358400 Sobic003G331400--Sobic004G004300 Sobic002G031100 Sobic002G031100 Sobic003G331400--Sobic002G031100 Sobic005G026200 Sobic005G026200 Sobic003G331400--Sobic005G026200 Sobic010G004100 Sobic010G004100 Sobic003G331400--Sobic010G004100 Sobic001G163400 Sobic001G163400 Sobic003G331400--Sobic001G163400
Octagon: transcription factors


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