Gene annotation
Transcriptome id Sobic.009G051600.1
Synonym ATPDI11, MEE30, Sb09g004370, ATPDIL2-1, PDI11, UNE5
Functional annotation OsPDIL2-1 protein disulfide isomerase PDIL2-1, expressed
UniProt C5Z0K4
Pfam PF13098 PF07749
Panther DB PTHR18929 PTHR18929:SF91
NCBI CDD KOG0191; Thioredoxin/protein disulfide isomerase
KEGG Orthology K09584; PDIA6, protein disulfide-isomerase A6
Gene Ontology GO:0005783; endoplasmic reticulum


Orthologs (automatic annotation)
TAIR AT2G47470 : thioredoxin family protein
RAP-DB (Rice) LOC_Os05g06430.2 : OsPDIL2-1 protein disulfide isomerase PDIL2-1, expressed
MaizeGDB (Corn) Zm00025a056083 , Zm00025a006997 , Zm00025a042978 , Zm00025a024472 , Zm00025a046450 , Zm00025a031180
Brachypodium KQK07394
Barley HORVU1Hr1G022810.1 , HORVU1Hr1G022810.2
Wheat TraesCS1D02G106500 , TraesCS1A02G097700 , TraesCS2B02G321000 , TraesCS2A02G304300 , TraesCS1B02G126100 , TraesCS2D02G302900
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.008G108200 receptor-like protein kinase 5 precursor, putative, expressed -
2 Sobic.001G367800 tetratricopeptide repeat containing protein, putative, expressed K17969: FIS1, TTC11, mitochondrial fission 1 protein
3 Sobic.002G370100 proline-rich protein, putative, expressed -
4 Sobic.010G002500 integral membrane protein, putative, expressed -
5 Sobic.004G045200 phytosulfokine receptor precursor, putative, expressed -
6 Sobic.002G118400 - -
7 Sobic.003G040500 tentative name(PubMedID : 31536532)@histone-like transcription factor and archaeal histone, putative, expressed K03004: DNA-directed RNA polymerase I subunit RPA43
8 Sobic.002G196900 expressed protein -
9 Sobic.004G350600 AMP-binding domain containing protein, expressed -
10 Sobic.001G536200 expressed protein -
11 Sobic.002G292500 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@ubiquitin fusion protein, putative, expressed K02927: RP-L40e, RPL40, ubiquitin-large subunit ribosomal protein L40e
12 Sobic.004G265000 erythronate-4-phosphate dehydrogenase domain containing protein, expressed K00122: formate dehydrogenase
13 Sobic.004G352700 methionine adenosyltransferase regulatory beta subunit-related, putative, expressed -
14 Sobic.003G159400 - -
15 Sobic.002G314950 - -
16 Sobic.008G165800 Protein kinase domain containing protein, expressed -
17 Sobic.001G061000 plastocyanin-like domain containing protein, putative, expressed -
18 Sobic.007G172300 fiber protein Fb14, putative, expressed K03938: NADH dehydrogenase (ubiquinone) Fe-S protein 5
19 Sobic.002G227100 cyclin-dependent kinase inhibitor, putative, expressed -
20 Sobic.005G011500 peroxidase precursor, putative, expressed K00430: peroxidase


Gene co-expression network
sample Sobic009G051600 Sobic009G051600 Sobic008G108200 Sobic008G108200 Sobic009G051600--Sobic008G108200 Sobic001G367800 Sobic001G367800 Sobic009G051600--Sobic001G367800 Sobic002G370100 Sobic002G370100 Sobic009G051600--Sobic002G370100 Sobic010G002500 Sobic010G002500 Sobic009G051600--Sobic010G002500 Sobic004G045200 Sobic004G045200 Sobic009G051600--Sobic004G045200 Sobic002G118400 Sobic002G118400 Sobic009G051600--Sobic002G118400 Sobic003G040500 Sobic003G040500 Sobic009G051600--Sobic003G040500 Sobic002G196900 Sobic002G196900 Sobic009G051600--Sobic002G196900 Sobic004G350600 Sobic004G350600 Sobic009G051600--Sobic004G350600 Sobic008G108200--Sobic004G045200 Sobic005G145700 Sobic005G145700 Sobic008G108200--Sobic005G145700 Sobic008G108200--Sobic001G367800 Sobic009G182000 Sobic009G182000 Sobic008G108200--Sobic009G182000 Sobic003G259000 Sobic003G259000 Sobic008G108200--Sobic003G259000 Sobic004G179000 Sobic004G179000 Sobic008G108200--Sobic004G179000 Sobic001G435800 Sobic001G435800 Sobic008G108200--Sobic001G435800 Sobic010G021401 Sobic010G021401 Sobic008G108200--Sobic010G021401 Sobic008G108200--Sobic003G040500 Sobic001G367800--Sobic001G435800 Sobic009G072400 Sobic009G072400 Sobic001G367800--Sobic009G072400 Sobic008G096900 Sobic008G096900 Sobic001G367800--Sobic008G096900 Sobic002G252700 Sobic002G252700 Sobic001G367800--Sobic002G252700 Sobic001G068901 Sobic001G068901 Sobic001G367800--Sobic001G068901 Sobic001G367800--Sobic002G118400 Sobic001G367800--Sobic010G021401 Sobic010G242100 Sobic010G242100 Sobic001G367800--Sobic010G242100 Sobic009G114900 Sobic009G114900 Sobic001G367800--Sobic009G114900 Sobic002G370100--Sobic003G040500 Sobic003G400332 Sobic003G400332 Sobic002G370100--Sobic003G400332 Sobic002G314950 Sobic002G314950 Sobic002G370100--Sobic002G314950 Sobic007G200200 Sobic007G200200 Sobic002G370100--Sobic007G200200 Sobic002G370100--Sobic010G002500 Sobic006G053000 Sobic006G053000 Sobic002G370100--Sobic006G053000 Sobic010G155901 Sobic010G155901 Sobic002G370100--Sobic010G155901 Sobic001G309000 Sobic001G309000 Sobic002G370100--Sobic001G309000 Sobic002G271900 Sobic002G271900 Sobic002G370100--Sobic002G271900 Sobic001G368000 Sobic001G368000 Sobic010G002500--Sobic001G368000 Sobic007G017300 Sobic007G017300 Sobic010G002500--Sobic007G017300 Sobic009G004500 Sobic009G004500 Sobic010G002500--Sobic009G004500 Sobic010G002500--Sobic010G021401 Sobic001G483200 Sobic001G483200 Sobic010G002500--Sobic001G483200 Sobic005G155001 Sobic005G155001 Sobic010G002500--Sobic005G155001 Sobic010G002500--Sobic009G114900 Sobic007G061500 Sobic007G061500 Sobic010G002500--Sobic007G061500 Sobic010G002500--Sobic002G314950 Sobic001G061000 Sobic001G061000 Sobic004G045200--Sobic001G061000 Sobic004G045200--Sobic002G118400 Sobic004G045200--Sobic007G200200 Sobic004G045200--Sobic002G314950 Sobic004G203600 Sobic004G203600 Sobic004G045200--Sobic004G203600 Sobic001G033200 Sobic001G033200 Sobic004G045200--Sobic001G033200 Sobic004G045200--Sobic009G182000 Sobic001G456650 Sobic001G456650 Sobic004G045200--Sobic001G456650 Sobic001G361750 Sobic001G361750 Sobic004G045200--Sobic001G361750 Sobic002G118400--Sobic001G061000 Sobic002G118400--Sobic004G045200 Sobic002G118400--Sobic002G314950 Sobic002G118400--Sobic001G033200 Sobic002G118400--Sobic007G200200 Sobic006G269300 Sobic006G269300 Sobic002G118400--Sobic006G269300 Sobic002G320700 Sobic002G320700 Sobic002G118400--Sobic002G320700 Sobic002G118400--Sobic001G456650 Sobic002G118400--Sobic004G203600 Sobic003G040500--Sobic002G370100 Sobic003G040500--Sobic001G309000 Sobic003G149900 Sobic003G149900 Sobic003G040500--Sobic003G149900 Sobic006G037000 Sobic006G037000 Sobic003G040500--Sobic006G037000 Sobic003G279600 Sobic003G279600 Sobic003G040500--Sobic003G279600 Sobic002G326200 Sobic002G326200 Sobic003G040500--Sobic002G326200 Sobic001G523300 Sobic001G523300 Sobic003G040500--Sobic001G523300 Sobic003G040500--Sobic010G155901 Sobic006G110600 Sobic006G110600 Sobic003G040500--Sobic006G110600 Sobic008G165800 Sobic008G165800 Sobic002G196900--Sobic008G165800 Sobic005G031100 Sobic005G031100 Sobic002G196900--Sobic005G031100 Sobic002G387400 Sobic002G387400 Sobic002G196900--Sobic002G387400 Sobic004G044500 Sobic004G044500 Sobic002G196900--Sobic004G044500 Sobic007G213500 Sobic007G213500 Sobic002G196900--Sobic007G213500 Sobic002G197400 Sobic002G197400 Sobic002G196900--Sobic002G197400 Sobic001G104100 Sobic001G104100 Sobic002G196900--Sobic001G104100 Sobic009G199900 Sobic009G199900 Sobic002G196900--Sobic009G199900 Sobic006G121200 Sobic006G121200 Sobic002G196900--Sobic006G121200 Sobic001G350300 Sobic001G350300 Sobic004G350600--Sobic001G350300 Sobic002G399000 Sobic002G399000 Sobic004G350600--Sobic002G399000 Sobic004G350600--Sobic001G104100 Sobic001G028500 Sobic001G028500 Sobic004G350600--Sobic001G028500 Sobic006G170800 Sobic006G170800 Sobic004G350600--Sobic006G170800 Sobic004G350600--Sobic009G199900 Sobic004G305300 Sobic004G305300 Sobic004G350600--Sobic004G305300 Sobic004G350600--Sobic002G320700 Sobic003G118500 Sobic003G118500 Sobic004G350600--Sobic003G118500
Octagon: transcription factors


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