Gene annotation
Transcriptome id Sobic.009G117900.3,Sobic.009G117900.1
Synonym Sb09g018560
Functional annotation OsFBX167 - F-box domain containing protein, expressed
UniProt C5YX90 , A0A1Z5R3D4
Pfam PF00646
Panther DB PTHR16008 PTHR16008:SF5
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR AT4G15563 : -
RAP-DB (Rice) LOC_Os05g30920.1 : OsFBX167 - F-box domain containing protein, expressed
MaizeGDB (Corn) Zm00025a043335 , Zm00025a037652
Brachypodium -
Barley -
Wheat TraesCS1B02G247300 , TraesCS1D02G236000
Populus -


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cDNA sequences
Sobic.009G117900


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G248800 ADP-ribosylation factor, putative, expressed K07955: ADP-ribosylation factor-like protein 8
2 Sobic.004G297300 ubiquitin carboxyl-terminal hydrolase, family 1, putative, expressed K05609: UCHL3, ubiquitin carboxyl-terminal hydrolase L3
3 Sobic.003G362400 G10 protein, putative, expressed K12873: BUD31, bud site selection protein 31
4 Sobic.010G257100 CGMC_MAPKCMGC_2.11 - CGMC includes CDA, MAPK, GSK3, and CLKC kinases, expressed K04371: ERK, mitogen-activated protein kinase 1/3
5 Sobic.002G194100 annexin, putative, expressed K17095: annexin A7/11
6 Sobic.004G196300 ras-related protein, putative, expressed K07877: Ras-related protein Rab-2A
7 Sobic.007G163700 zinc finger protein 593, putative, expressed K14821: bud site selection protein 20
8 Sobic.001G529000 THO complex subunit 7, putative, expressed K13176: THO complex subunit 7
9 Sobic.009G191600 tesmin/TSO1-like CXC domain containing protein, expressed -
10 Sobic.003G249800 60S ribosomal protein L18a-1, putative, expressed -
11 Sobic.006G232200 SNARE domain containing protein, putative, expressed K08501: syntaxin 8
K08503: syntaxin of plants SYP5
12 Sobic.001G367000 TRAF-type zinc finger domain-containing protein 1, putative, expressed -
13 Sobic.009G232000 ribosomal protein L24, putative, expressed K02896: RP-L24e, large subunit ribosomal protein L24e
14 Sobic.003G072300 triosephosphate isomerase(PubMedID : 27016024)@triosephosphate isomerase, cytosolic, putative, expressed K01803: TPI, triosephosphate isomerase (TIM)
15 Sobic.010G039800 expressed protein -
16 Sobic.006G012900 sterol 3-beta-glucosyltransferase, putative, expressed K05841: sterol 3beta-glucosyltransferase
17 Sobic.010G185500 ethanol tolerance protein GEKO1, putative, expressed K09716: dtdA, D-aminoacyl-tRNA deacylase
18 Sobic.010G243200 ZOS6-08 - C2H2 zinc finger protein, expressed K14816: pre-60S factor REI1
19 Sobic.009G232400 expressed protein -
20 Sobic.010G253800 expressed protein -


Gene co-expression network
sample Sobic009G117900 Sobic009G117900 Sobic004G248800 Sobic004G248800 Sobic009G117900--Sobic004G248800 Sobic004G297300 Sobic004G297300 Sobic009G117900--Sobic004G297300 Sobic003G362400 Sobic003G362400 Sobic009G117900--Sobic003G362400 Sobic010G257100 Sobic010G257100 Sobic009G117900--Sobic010G257100 Sobic002G194100 Sobic002G194100 Sobic009G117900--Sobic002G194100 Sobic004G196300 Sobic004G196300 Sobic009G117900--Sobic004G196300 Sobic007G163700 Sobic007G163700 Sobic009G117900--Sobic007G163700 Sobic001G529000 Sobic001G529000 Sobic009G117900--Sobic001G529000 Sobic009G191600 Sobic009G191600 Sobic009G117900--Sobic009G191600 Sobic006G141500 Sobic006G141500 Sobic004G248800--Sobic006G141500 Sobic004G248800--Sobic001G529000 Sobic010G039800 Sobic010G039800 Sobic004G248800--Sobic010G039800 Sobic003G253000 Sobic003G253000 Sobic004G248800--Sobic003G253000 Sobic004G293700 Sobic004G293700 Sobic004G248800--Sobic004G293700 Sobic008G161800 Sobic008G161800 Sobic004G248800--Sobic008G161800 Sobic002G263800 Sobic002G263800 Sobic004G248800--Sobic002G263800 Sobic002G218000 Sobic002G218000 Sobic004G248800--Sobic002G218000 Sobic003G249800 Sobic003G249800 Sobic004G248800--Sobic003G249800 Sobic003G358300 Sobic003G358300 Sobic004G297300--Sobic003G358300 Sobic004G297300--Sobic003G362400 Sobic004G297300--Sobic009G117900 Sobic004G166500 Sobic004G166500 Sobic004G297300--Sobic004G166500 Sobic004G138800 Sobic004G138800 Sobic004G297300--Sobic004G138800 Sobic003G072300 Sobic003G072300 Sobic004G297300--Sobic003G072300 Sobic001G483100 Sobic001G483100 Sobic004G297300--Sobic001G483100 Sobic006G222400 Sobic006G222400 Sobic004G297300--Sobic006G222400 Sobic001G066700 Sobic001G066700 Sobic004G297300--Sobic001G066700 Sobic002G078400 Sobic002G078400 Sobic003G362400--Sobic002G078400 Sobic004G107600 Sobic004G107600 Sobic003G362400--Sobic004G107600 Sobic003G362400--Sobic001G529000 Sobic007G091000 Sobic007G091000 Sobic003G362400--Sobic007G091000 Sobic005G111100 Sobic005G111100 Sobic003G362400--Sobic005G111100 Sobic002G116200 Sobic002G116200 Sobic003G362400--Sobic002G116200 Sobic001G331900 Sobic001G331900 Sobic003G362400--Sobic001G331900 Sobic010G213400 Sobic010G213400 Sobic003G362400--Sobic010G213400 Sobic009G232000 Sobic009G232000 Sobic003G362400--Sobic009G232000 Sobic001G019900 Sobic001G019900 Sobic010G257100--Sobic001G019900 Sobic001G084900 Sobic001G084900 Sobic010G257100--Sobic001G084900 Sobic003G321700 Sobic003G321700 Sobic010G257100--Sobic003G321700 Sobic010G257100--Sobic003G249800 Sobic005G092800 Sobic005G092800 Sobic010G257100--Sobic005G092800 Sobic010G243200 Sobic010G243200 Sobic010G257100--Sobic010G243200 Sobic004G026400 Sobic004G026400 Sobic010G257100--Sobic004G026400 Sobic010G153100 Sobic010G153100 Sobic010G257100--Sobic010G153100 Sobic010G257100--Sobic003G072300 Sobic001G040800 Sobic001G040800 Sobic002G194100--Sobic001G040800 Sobic002G202300 Sobic002G202300 Sobic002G194100--Sobic002G202300 Sobic006G232200 Sobic006G232200 Sobic002G194100--Sobic006G232200 Sobic002G194100--Sobic004G293700 Sobic001G459200 Sobic001G459200 Sobic002G194100--Sobic001G459200 Sobic001G054200 Sobic001G054200 Sobic002G194100--Sobic001G054200 Sobic002G194100--Sobic004G248800 Sobic002G194100--Sobic003G253000 Sobic004G079100 Sobic004G079100 Sobic002G194100--Sobic004G079100 Sobic010G018400 Sobic010G018400 Sobic004G196300--Sobic010G018400 Sobic004G196300--Sobic003G249800 Sobic001G309500 Sobic001G309500 Sobic004G196300--Sobic001G309500 Sobic001G034700 Sobic001G034700 Sobic004G196300--Sobic001G034700 Sobic003G155400 Sobic003G155400 Sobic004G196300--Sobic003G155400 Sobic004G196300--Sobic002G078400 Sobic006G182100 Sobic006G182100 Sobic004G196300--Sobic006G182100 Sobic004G066800 Sobic004G066800 Sobic004G196300--Sobic004G066800 Sobic004G196300--Sobic010G153100 Sobic006G231700 Sobic006G231700 Sobic007G163700--Sobic006G231700 Sobic001G517600 Sobic001G517600 Sobic007G163700--Sobic001G517600 Sobic005G157200 Sobic005G157200 Sobic007G163700--Sobic005G157200 Sobic010G267900 Sobic010G267900 Sobic007G163700--Sobic010G267900 Sobic007G163700--Sobic001G529000 Sobic001G128400 Sobic001G128400 Sobic007G163700--Sobic001G128400 Sobic007G163700--Sobic003G362400 Sobic002G373800 Sobic002G373800 Sobic007G163700--Sobic002G373800 Sobic003G018600 Sobic003G018600 Sobic007G163700--Sobic003G018600 Sobic001G529000--Sobic003G362400 Sobic001G529000--Sobic004G248800 Sobic003G124800 Sobic003G124800 Sobic001G529000--Sobic003G124800 Sobic001G529000--Sobic001G331900 Sobic001G529000--Sobic005G157200 Sobic001G529000--Sobic007G163700 Sobic001G529000--Sobic010G039800 Sobic007G203700 Sobic007G203700 Sobic001G529000--Sobic007G203700 Sobic004G300900 Sobic004G300900 Sobic001G529000--Sobic004G300900 Sobic009G191600--Sobic001G066700 Sobic009G191600--Sobic003G362400 Sobic006G062800 Sobic006G062800 Sobic009G191600--Sobic006G062800 Sobic001G041100 Sobic001G041100 Sobic009G191600--Sobic001G041100 Sobic009G191600--Sobic003G358300 Sobic009G191600--Sobic010G213400 Sobic003G023500 Sobic003G023500 Sobic009G191600--Sobic003G023500 Sobic002G376500 Sobic002G376500 Sobic009G191600--Sobic002G376500 Sobic001G224400 Sobic001G224400 Sobic009G191600--Sobic001G224400
Octagon: transcription factors


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