Gene annotation
Transcriptome id Sobic.009G138500.1
Synonym AS2, lateral organ boundaries, Sb09g020440, SbLBD31
Functional annotation "domain confirmed by Pfam database, expressed in leaf, expression induced by IAA and BR treatments" (PubMedID : 20499123)
DUF260 domain containing protein, putative, expressed
UniProt A0A1Z5R3K0
Pfam PF03195
Panther DB PTHR31301 PTHR31301:SF26
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G65620 : Lateral organ boundaries (LOB) domain family protein
RAP-DB (Rice) LOC_Os01g66590.2 : DUF260 domain containing protein, putative, expressed
MaizeGDB (Corn) Zm00025a039468 , Zm00025a037418 , Zm00025a007408 , Zm00025a023282 , Zm00025a001561 , Zm00025a026486 , Zm00025a043711
Brachypodium PNT65593 , KQJ88008 , KQK02883 , KQK02882 , KQK02881 , KQK02880 , KQK02884 , KQK10975 , KQK10976 , KQK06241 , KQK06240 , KQK22581 , KQK23639 , KQK23638 , KQK14196 , KQK14197 , KQK14195 , KQK14198 , KQK14199 , PNT74441 , PNT74440 , PNT74443 , PNT74442 , PNT74444
Barley HORVU0Hr1G017670.1 , HORVU0Hr1G017670.2 , HORVU0Hr1G017670.5 , HORVU0Hr1G017670.4 , HORVU3Hr1G016690.3 , HORVU3Hr1G016690.2 , HORVU3Hr1G016690.1 , HORVU1Hr1G064640.2 , HORVU4Hr1G013630.9 , HORVU4Hr1G013630.8 , HORVU1Hr1G064640.1 , HORVU4Hr1G013630.5 , HORVU4Hr1G013630.4 , HORVU4Hr1G013630.7 , HORVU4Hr1G013630.6 , HORVU4Hr1G013630.1 , HORVU4Hr1G013630.3 , HORVU4Hr1G013630.2 , HORVU3Hr1G090250.1 , HORVU3Hr1G090250.3 , HORVU3Hr1G090250.2 , HORVU3Hr1G090250.5 , HORVU3Hr1G090250.4 , HORVU3Hr1G090250.6 , HORVU4Hr1G013630.11 , HORVU4Hr1G013630.10 , HORVU1Hr1G064640.4 , HORVU1Hr1G064640.3 , HORVU0Hr1G017670.3 , HORVU4Hr1G063160.6 , HORVU4Hr1G063160.4 , HORVU4Hr1G063160.5 , HORVU4Hr1G063160.3 , HORVU4Hr1G063160.1 , HORVU3Hr1G090240.2 , HORVU3Hr1G090240.3 , HORVU3Hr1G090240.1 , HORVU3Hr1G090240.6 , HORVU3Hr1G090240.4 , HORVU3Hr1G090240.5
Wheat TraesCS6B02G438700 , TraesCS1A02G260000 , TraesCS4D02G225200 , TraesCS4A02G067300 , TraesCS3D02G397200 , TraesCS3A02G402300 , TraesCS3B02G435700 , TraesCS1D02G259900 , TraesCS6D02G382600 , TraesCS1B02G270400 , TraesCS6A02G398400
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.008G068400 - -
2 Sobic.004G291800 - -
3 Sobic.009G197200 - -
4 Sobic.003G029300 lachrymatory factor synthase, putative, expressed -
5 Sobic.003G038000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Lipase class 3 family protein (At)(PubMedID : 27208977)@phospholipase, putative, expressed -
6 Sobic.004G249500 B-box (BBX) protein(PubMedID : 30626335)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@CCT/B-box zinc finger protein, putative, expressed -
7 Sobic.007G154800 bifunctional monodehydroascorbate reductase and carbonic anhydrasenectarin-3 precursor, putative, expressed K01674: carbonic anhydrase
8 Sobic.002G425300 zinc finger, C3HC4 type domain containing protein, expressed K16282: E3 ubiquitin-protein ligase RHA2
9 Sobic.010G161600 peroxidase precursor, putative, expressed K00430: peroxidase
10 Sobic.006G191400 - -
11 Sobic.007G000400 B3 DNA binding domain containing protein, expressed -
12 Sobic.006G273100 - -
13 Sobic.001G061600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@peptidase M50, mammalian sterol-regulatory element binding protein, putative, expressed -
14 Sobic.008G091671 - -
15 Sobic.008G048933 - -
16 Sobic.004G315800 ZOS2-17 - C2H2 zinc finger protein, expressed -
17 Sobic.008G153600 WRKY94, expressed -
18 Sobic.006G263700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@tetratricopeptide repeat domain containing protein, expressed -
19 Sobic.001G132500 - -
20 Sobic.010G144100 - -


Gene co-expression network
sample Sobic009G138500 Sobic009G138500 Sobic008G068400 Sobic008G068400 Sobic009G138500--Sobic008G068400 Sobic004G291800 Sobic004G291800 Sobic009G138500--Sobic004G291800 Sobic009G197200 Sobic009G197200 Sobic009G138500--Sobic009G197200 Sobic003G029300 Sobic003G029300 Sobic009G138500--Sobic003G029300 Sobic003G038000 Sobic003G038000 Sobic009G138500--Sobic003G038000 Sobic004G249500 Sobic004G249500 Sobic009G138500--Sobic004G249500 Sobic007G154800 Sobic007G154800 Sobic009G138500--Sobic007G154800 Sobic002G425300 Sobic002G425300 Sobic009G138500--Sobic002G425300 Sobic010G161600 Sobic010G161600 Sobic009G138500--Sobic010G161600 Sobic008G068400--Sobic009G197200 Sobic006G132200 Sobic006G132200 Sobic008G068400--Sobic006G132200 Sobic007G115000 Sobic007G115000 Sobic008G068400--Sobic007G115000 Sobic005G212500 Sobic005G212500 Sobic008G068400--Sobic005G212500 Sobic009G004700 Sobic009G004700 Sobic008G068400--Sobic009G004700 Sobic010G144100 Sobic010G144100 Sobic008G068400--Sobic010G144100 Sobic003G031750 Sobic003G031750 Sobic008G068400--Sobic003G031750 Sobic002G062300 Sobic002G062300 Sobic008G068400--Sobic002G062300 Sobic003G424100 Sobic003G424100 Sobic008G068400--Sobic003G424100 Sobic004G020401 Sobic004G020401 Sobic004G291800--Sobic004G020401 Sobic004G291800--Sobic009G197200 Sobic009G110366 Sobic009G110366 Sobic004G291800--Sobic009G110366 Sobic002G212800 Sobic002G212800 Sobic004G291800--Sobic002G212800 Sobic007G112900 Sobic007G112900 Sobic004G291800--Sobic007G112900 Sobic009G109450 Sobic009G109450 Sobic004G291800--Sobic009G109450 Sobic007G130100 Sobic007G130100 Sobic004G291800--Sobic007G130100 Sobic006G273100 Sobic006G273100 Sobic004G291800--Sobic006G273100 Sobic003G057800 Sobic003G057800 Sobic004G291800--Sobic003G057800 Sobic009G197200--Sobic004G291800 Sobic009G197200--Sobic004G020401 Sobic009G197200--Sobic009G110366 Sobic009G197200--Sobic009G109450 Sobic009G197200--Sobic008G068400 Sobic009G197200--Sobic006G273100 Sobic008G091671 Sobic008G091671 Sobic009G197200--Sobic008G091671 Sobic009G197200--Sobic010G144100 Sobic009G197200--Sobic002G212800 Sobic003G029300--Sobic007G154800 Sobic007G123200 Sobic007G123200 Sobic003G029300--Sobic007G123200 Sobic009G102800 Sobic009G102800 Sobic003G029300--Sobic009G102800 Sobic004G240900 Sobic004G240900 Sobic003G029300--Sobic004G240900 Sobic004G193800 Sobic004G193800 Sobic003G029300--Sobic004G193800 Sobic004G151900 Sobic004G151900 Sobic003G029300--Sobic004G151900 Sobic006G062400 Sobic006G062400 Sobic003G029300--Sobic006G062400 Sobic004G016500 Sobic004G016500 Sobic003G029300--Sobic004G016500 Sobic001G046600 Sobic001G046600 Sobic003G029300--Sobic001G046600 Sobic002G047100 Sobic002G047100 Sobic003G038000--Sobic002G047100 Sobic003G038000--Sobic006G132200 Sobic010G208500 Sobic010G208500 Sobic003G038000--Sobic010G208500 Sobic007G066050 Sobic007G066050 Sobic003G038000--Sobic007G066050 Sobic003G038000--Sobic009G197200 Sobic001G132500 Sobic001G132500 Sobic003G038000--Sobic001G132500 Sobic002G318900 Sobic002G318900 Sobic003G038000--Sobic002G318900 Sobic003G038000--Sobic004G240900 Sobic003G038000--Sobic003G424100 Sobic001G076200 Sobic001G076200 Sobic004G249500--Sobic001G076200 Sobic003G030400 Sobic003G030400 Sobic004G249500--Sobic003G030400 Sobic008G101500 Sobic008G101500 Sobic004G249500--Sobic008G101500 Sobic009G238100 Sobic009G238100 Sobic004G249500--Sobic009G238100 Sobic001G426400 Sobic001G426400 Sobic004G249500--Sobic001G426400 Sobic008G177850 Sobic008G177850 Sobic004G249500--Sobic008G177850 Sobic004G246800 Sobic004G246800 Sobic004G249500--Sobic004G246800 Sobic003G114100 Sobic003G114100 Sobic004G249500--Sobic003G114100 Sobic005G009300 Sobic005G009300 Sobic004G249500--Sobic005G009300 Sobic007G154800--Sobic003G029300 Sobic007G154800--Sobic006G062400 Sobic007G154800--Sobic004G151900 Sobic007G154800--Sobic009G102800 Sobic007G154800--Sobic007G066050 Sobic008G176666 Sobic008G176666 Sobic007G154800--Sobic008G176666 Sobic008G176732 Sobic008G176732 Sobic007G154800--Sobic008G176732 Sobic007G154800--Sobic010G144100 Sobic001G061600 Sobic001G061600 Sobic007G154800--Sobic001G061600 Sobic003G074500 Sobic003G074500 Sobic002G425300--Sobic003G074500 Sobic010G273600 Sobic010G273600 Sobic002G425300--Sobic010G273600 Sobic009G107500 Sobic009G107500 Sobic002G425300--Sobic009G107500 Sobic007G071000 Sobic007G071000 Sobic002G425300--Sobic007G071000 Sobic003G264901 Sobic003G264901 Sobic002G425300--Sobic003G264901 Sobic001G511000 Sobic001G511000 Sobic002G425300--Sobic001G511000 Sobic002G425300--Sobic004G291800 Sobic009G082200 Sobic009G082200 Sobic002G425300--Sobic009G082200 Sobic001G053900 Sobic001G053900 Sobic002G425300--Sobic001G053900 Sobic009G033200 Sobic009G033200 Sobic010G161600--Sobic009G033200 Sobic010G161600--Sobic004G249500 Sobic010G161600--Sobic009G138500 Sobic010G161600--Sobic009G197200 Sobic006G060700 Sobic006G060700 Sobic010G161600--Sobic006G060700 Sobic008G000900 Sobic008G000900 Sobic010G161600--Sobic008G000900 Sobic005G218400 Sobic005G218400 Sobic010G161600--Sobic005G218400 Sobic005G141000 Sobic005G141000 Sobic010G161600--Sobic005G141000 Sobic010G161600--Sobic004G246800
Octagon: transcription factors


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