Gene annotation
Transcriptome id Sobic.009G144500.4,Sobic.009G144500.5,Sobic.009G144500.3
Synonym
Functional annotation expressed protein
UniProt A0A1B6P8Q2
Pfam -
Panther DB PTHR33728 PTHR33728:SF2
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G09812 : -
RAP-DB (Rice) LOC_Os05g35230.1 : expressed protein
MaizeGDB (Corn) Zm00025a039512 , Zm00025a026586 , Zm00025a043748
Brachypodium KQK06132 , KQK06131
Barley -
Wheat TraesCS3A02G388400 , TraesCS3B02G420400 , TraesCS3B02G420400 , TraesCS1B02G277600 , TraesCS3D02G381200 , TraesCS1A02G266700 , TraesCS1D02G266900 , TraesCS1D02G266900
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G304500 expressed protein -
2 Sobic.007G023600 ATP binding protein, putative, expressed -
3 Sobic.004G071050 - -
4 Sobic.007G041200 cytochrome P450, putative, expressed -
5 Sobic.009G033500 peroxidase precursor, putative, expressed K00430: peroxidase
6 Sobic.008G179800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@GATA zinc finger domain containing protein, expressed -
7 Sobic.001G485200 AP2 domain containing protein, expressed K09285: OVM, AP2-like factor, ANT lineage
8 Sobic.004G250600 NHL repeat-containing protein, putative, expressed -
9 Sobic.006G261200 Trihelix Family(PubMedID : 24864043)@GL4(Ortholog in rice:Wu et al. (2017) )(PubMedID : 31659902)@transcription factor, putative, expressed -
10 Sobic.009G148000 anthranilate phosphoribosyltransferase, putative, expressed -
11 Sobic.010G118200 phosphatidylinositol 3- and 4-kinase family protein, putative, expressed -
12 Sobic.003G363400 bZIP transcription factor, putative, expressed K14432: ABA responsive element binding factor
13 Sobic.009G253800 aspartic proteinase, putative, expressed -
14 Sobic.004G339900 expressed protein -
15 Sobic.008G116100 bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase,chloroplast precursor, putative, expressed K13832: aroDE, 3-dehydroquinate dehydratase / shikimate dehydrogenase
16 Sobic.007G091200 wax synthase isoform 1, putative, expressed -
17 Sobic.004G190200 aldose 1-epimerase, putative, expressed K01785: galM, aldose 1-epimerase
18 Sobic.004G210000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@ACT domain containing protein, expressed K01653: E2.2.1.6S, ilvH, acetolactate synthase I/III small subunit
19 Sobic.002G247300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@transcription factor, putative, expressed K14431: transcription factor TGA
20 Sobic.003G217500 expressed protein -


Gene co-expression network
sample Sobic009G144500 Sobic009G144500 Sobic003G304500 Sobic003G304500 Sobic009G144500--Sobic003G304500 Sobic007G023600 Sobic007G023600 Sobic009G144500--Sobic007G023600 Sobic004G071050 Sobic004G071050 Sobic009G144500--Sobic004G071050 Sobic007G041200 Sobic007G041200 Sobic009G144500--Sobic007G041200 Sobic009G033500 Sobic009G033500 Sobic009G144500--Sobic009G033500 Sobic008G179800 Sobic008G179800 Sobic009G144500--Sobic008G179800 Sobic001G485200 Sobic001G485200 Sobic009G144500--Sobic001G485200 Sobic004G250600 Sobic004G250600 Sobic009G144500--Sobic004G250600 Sobic006G261200 Sobic006G261200 Sobic009G144500--Sobic006G261200 Sobic009G025100 Sobic009G025100 Sobic003G304500--Sobic009G025100 Sobic003G304500--Sobic009G033500 Sobic001G170500 Sobic001G170500 Sobic003G304500--Sobic001G170500 Sobic004G274500 Sobic004G274500 Sobic003G304500--Sobic004G274500 Sobic004G196800 Sobic004G196800 Sobic003G304500--Sobic004G196800 Sobic004G155300 Sobic004G155300 Sobic003G304500--Sobic004G155300 Sobic004G318400 Sobic004G318400 Sobic003G304500--Sobic004G318400 Sobic010G037200 Sobic010G037200 Sobic003G304500--Sobic010G037200 Sobic007G091200 Sobic007G091200 Sobic003G304500--Sobic007G091200 Sobic009G253800 Sobic009G253800 Sobic007G023600--Sobic009G253800 Sobic007G023600--Sobic006G261200 Sobic003G402100 Sobic003G402100 Sobic007G023600--Sobic003G402100 Sobic004G190200 Sobic004G190200 Sobic007G023600--Sobic004G190200 Sobic010G118200 Sobic010G118200 Sobic007G023600--Sobic010G118200 Sobic007G023600--Sobic001G170500 Sobic007G023600--Sobic007G091200 Sobic007G023600--Sobic004G250600 Sobic004G294500 Sobic004G294500 Sobic007G023600--Sobic004G294500 Sobic004G071050--Sobic001G485200 Sobic010G106601 Sobic010G106601 Sobic004G071050--Sobic010G106601 Sobic002G420400 Sobic002G420400 Sobic004G071050--Sobic002G420400 Sobic004G339900 Sobic004G339900 Sobic004G071050--Sobic004G339900 Sobic004G071050--Sobic009G033500 Sobic004G071050--Sobic009G253800 Sobic004G065800 Sobic004G065800 Sobic004G071050--Sobic004G065800 Sobic006G107900 Sobic006G107900 Sobic004G071050--Sobic006G107900 Sobic004G071050--Sobic007G091200 Sobic008G116100 Sobic008G116100 Sobic007G041200--Sobic008G116100 Sobic007G041200--Sobic009G033500 Sobic010G084800 Sobic010G084800 Sobic007G041200--Sobic010G084800 Sobic010G047300 Sobic010G047300 Sobic007G041200--Sobic010G047300 Sobic002G097601 Sobic002G097601 Sobic007G041200--Sobic002G097601 Sobic006G186300 Sobic006G186300 Sobic007G041200--Sobic006G186300 Sobic007G041200--Sobic007G091200 Sobic008G109600 Sobic008G109600 Sobic007G041200--Sobic008G109600 Sobic010G060100 Sobic010G060100 Sobic007G041200--Sobic010G060100 Sobic009G033500--Sobic007G091200 Sobic009G033500--Sobic007G041200 Sobic009G033500--Sobic010G060100 Sobic001G425900 Sobic001G425900 Sobic009G033500--Sobic001G425900 Sobic009G033500--Sobic010G118200 Sobic009G033500--Sobic010G084800 Sobic007G205400 Sobic007G205400 Sobic009G033500--Sobic007G205400 Sobic004G133600 Sobic004G133600 Sobic009G033500--Sobic004G133600 Sobic001G518700 Sobic001G518700 Sobic009G033500--Sobic001G518700 Sobic010G207400 Sobic010G207400 Sobic008G179800--Sobic010G207400 Sobic008G179800--Sobic004G196800 Sobic008G179800--Sobic004G250600 Sobic008G179800--Sobic010G118200 Sobic008G179800--Sobic007G023600 Sobic008G179800--Sobic001G170500 Sobic008G156200 Sobic008G156200 Sobic008G179800--Sobic008G156200 Sobic008G179800--Sobic009G253800 Sobic004G038900 Sobic004G038900 Sobic008G179800--Sobic004G038900 Sobic001G485200--Sobic006G107900 Sobic003G400400 Sobic003G400400 Sobic001G485200--Sobic003G400400 Sobic001G485200--Sobic004G071050 Sobic002G391100 Sobic002G391100 Sobic001G485200--Sobic002G391100 Sobic001G017500 Sobic001G017500 Sobic001G485200--Sobic001G017500 Sobic001G485200--Sobic004G339900 Sobic001G485200--Sobic010G106601 Sobic001G485200--Sobic002G420400 Sobic002G302300 Sobic002G302300 Sobic001G485200--Sobic002G302300 Sobic004G250600--Sobic007G023600 Sobic004G250600--Sobic006G261200 Sobic003G217500 Sobic003G217500 Sobic004G250600--Sobic003G217500 Sobic004G250600--Sobic001G170500 Sobic004G250600--Sobic003G304500 Sobic004G250600--Sobic006G186300 Sobic004G250600--Sobic008G179800 Sobic004G250600--Sobic010G207400 Sobic004G250600--Sobic009G025100 Sobic006G261200--Sobic007G023600 Sobic006G261200--Sobic001G170500 Sobic009G168300 Sobic009G168300 Sobic006G261200--Sobic009G168300 Sobic006G261200--Sobic003G402100 Sobic006G261200--Sobic010G118200 Sobic006G261200--Sobic004G250600 Sobic009G017000 Sobic009G017000 Sobic006G261200--Sobic009G017000 Sobic006G261200--Sobic009G253800 Sobic001G068200 Sobic001G068200 Sobic006G261200--Sobic001G068200
Octagon: transcription factors


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