Gene annotation
Transcriptome id Sobic.009G172200.1
Synonym
Functional annotation expressed protein
UniProt A0A1Z5R349
Pfam -
Panther DB PTHR34835
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os04g04410.1 : expressed protein
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G041900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@DUF581 domain containing protein, expressed -
2 Sobic.010G097000 leaf senescence related protein, putative, expressed -
3 Sobic.004G269100 ATROPGEF7/ROPGEF7, putative, expressed -
4 Sobic.003G078300 leucine-rich repeat protein-related, putative, expressed -
5 Sobic.003G055800 expressed protein -
6 Sobic.002G225000 remorin C-terminal domain containing protein, putative, expressed -
7 Sobic.003G222800 lipase, putative, expressed -
8 Sobic.003G401800 expressed protein -
9 Sobic.009G099150 - -
10 Sobic.006G211900 Cinnamyl alcohol dehydrogenase(PubMedID : 28606901)@Cinnamyl alcohol dehydrogenase(PubMedID : 19087955)@dehydrogenase, putative, expressed K00083: cinnamyl-alcohol dehydrogenase
11 Sobic.004G253500 auxin-independent growth promoter protein, putative, expressed -
12 Sobic.001G425700 BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative, expressed -
13 Sobic.008G175400 U-box domain-containing protein, putative, expressed -
14 Sobic.003G148400 Pectinesterase 1 (Precursor)(PubMedID : 26186930)@pectinesterase, putative, expressed K01051: pectinesterase
15 Sobic.004G164700 expressed protein -
16 Sobic.002G164700 ZOS9-04 - C2H2 zinc finger protein, expressed -
17 Sobic.003G291000 protein kinase family protein, putative, expressed -
18 Sobic.001G467800 expressed protein -
19 Sobic.009G216300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@polygalacturonase, putative, expressed -
20 Sobic.003G251700 "domain confirmed by Pfam database, expression supported by NCBI EST database, expressed in leaf and root"(PubMedID : 20499123)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@auxin response factor, putative, expressed K14486: K14486, auxin response factor


Gene co-expression network
sample Sobic009G172200 Sobic009G172200 Sobic003G041900 Sobic003G041900 Sobic009G172200--Sobic003G041900 Sobic010G097000 Sobic010G097000 Sobic009G172200--Sobic010G097000 Sobic004G269100 Sobic004G269100 Sobic009G172200--Sobic004G269100 Sobic003G078300 Sobic003G078300 Sobic009G172200--Sobic003G078300 Sobic003G055800 Sobic003G055800 Sobic009G172200--Sobic003G055800 Sobic002G225000 Sobic002G225000 Sobic009G172200--Sobic002G225000 Sobic003G222800 Sobic003G222800 Sobic009G172200--Sobic003G222800 Sobic003G401800 Sobic003G401800 Sobic009G172200--Sobic003G401800 Sobic009G099150 Sobic009G099150 Sobic009G172200--Sobic009G099150 Sobic004G164700 Sobic004G164700 Sobic003G041900--Sobic004G164700 Sobic010G023400 Sobic010G023400 Sobic003G041900--Sobic010G023400 Sobic010G192500 Sobic010G192500 Sobic003G041900--Sobic010G192500 Sobic006G241800 Sobic006G241800 Sobic003G041900--Sobic006G241800 Sobic010G086000 Sobic010G086000 Sobic003G041900--Sobic010G086000 Sobic008G190000 Sobic008G190000 Sobic003G041900--Sobic008G190000 Sobic004G317200 Sobic004G317200 Sobic003G041900--Sobic004G317200 Sobic006G142500 Sobic006G142500 Sobic003G041900--Sobic006G142500 Sobic006G211900 Sobic006G211900 Sobic003G041900--Sobic006G211900 Sobic010G097000--Sobic003G055800 Sobic010G097000--Sobic009G172200 Sobic003G250000 Sobic003G250000 Sobic010G097000--Sobic003G250000 Sobic003G148400 Sobic003G148400 Sobic010G097000--Sobic003G148400 Sobic010G097000--Sobic004G269100 Sobic010G097000--Sobic003G078300 Sobic001G461800 Sobic001G461800 Sobic010G097000--Sobic001G461800 Sobic003G291000 Sobic003G291000 Sobic010G097000--Sobic003G291000 Sobic009G002900 Sobic009G002900 Sobic010G097000--Sobic009G002900 Sobic008G052300 Sobic008G052300 Sobic004G269100--Sobic008G052300 Sobic002G259200 Sobic002G259200 Sobic004G269100--Sobic002G259200 Sobic003G251700 Sobic003G251700 Sobic004G269100--Sobic003G251700 Sobic005G092700 Sobic005G092700 Sobic004G269100--Sobic005G092700 Sobic005G153000 Sobic005G153000 Sobic004G269100--Sobic005G153000 Sobic004G269100--Sobic001G461800 Sobic004G269100--Sobic003G250000 Sobic004G269100--Sobic003G222800 Sobic004G269100--Sobic003G055800 Sobic002G311000 Sobic002G311000 Sobic003G078300--Sobic002G311000 Sobic004G253500 Sobic004G253500 Sobic003G078300--Sobic004G253500 Sobic003G078300--Sobic001G461800 Sobic001G389600 Sobic001G389600 Sobic003G078300--Sobic001G389600 Sobic006G257200 Sobic006G257200 Sobic003G078300--Sobic006G257200 Sobic003G078300--Sobic003G291000 Sobic002G045200 Sobic002G045200 Sobic003G078300--Sobic002G045200 Sobic003G078300--Sobic003G250000 Sobic002G362700 Sobic002G362700 Sobic003G078300--Sobic002G362700 Sobic003G055800--Sobic004G269100 Sobic003G055800--Sobic003G222800 Sobic003G055800--Sobic002G259200 Sobic003G055800--Sobic003G041900 Sobic003G055800--Sobic003G250000 Sobic003G055800--Sobic001G461800 Sobic003G055800--Sobic003G291000 Sobic003G055800--Sobic005G092700 Sobic003G055800--Sobic010G097000 Sobic009G231100 Sobic009G231100 Sobic002G225000--Sobic009G231100 Sobic002G225000--Sobic003G078300 Sobic002G377300 Sobic002G377300 Sobic002G225000--Sobic002G377300 Sobic001G379100 Sobic001G379100 Sobic002G225000--Sobic001G379100 Sobic010G165100 Sobic010G165100 Sobic002G225000--Sobic010G165100 Sobic002G225000--Sobic003G148400 Sobic003G223000 Sobic003G223000 Sobic002G225000--Sobic003G223000 Sobic002G388600 Sobic002G388600 Sobic002G225000--Sobic002G388600 Sobic002G078000 Sobic002G078000 Sobic002G225000--Sobic002G078000 Sobic003G222800--Sobic002G259200 Sobic003G222800--Sobic004G269100 Sobic003G222800--Sobic003G055800 Sobic003G222800--Sobic003G041900 Sobic006G041700 Sobic006G041700 Sobic003G222800--Sobic006G041700 Sobic001G493100 Sobic001G493100 Sobic003G222800--Sobic001G493100 Sobic006G172000 Sobic006G172000 Sobic003G222800--Sobic006G172000 Sobic003G222800--Sobic003G251700 Sobic003G222800--Sobic005G092700 Sobic007G000700 Sobic007G000700 Sobic003G401800--Sobic007G000700 Sobic003G226700 Sobic003G226700 Sobic003G401800--Sobic003G226700 Sobic003G401800--Sobic003G078300 Sobic010G211800 Sobic010G211800 Sobic003G401800--Sobic010G211800 Sobic002G320600 Sobic002G320600 Sobic003G401800--Sobic002G320600 Sobic009G128800 Sobic009G128800 Sobic003G401800--Sobic009G128800 Sobic001G437500 Sobic001G437500 Sobic003G401800--Sobic001G437500 Sobic001G425700 Sobic001G425700 Sobic003G401800--Sobic001G425700 Sobic010G165900 Sobic010G165900 Sobic003G401800--Sobic010G165900 Sobic009G099150--Sobic006G211900 Sobic003G031700 Sobic003G031700 Sobic009G099150--Sobic003G031700 Sobic001G522300 Sobic001G522300 Sobic009G099150--Sobic001G522300 Sobic007G087800 Sobic007G087800 Sobic009G099150--Sobic007G087800 Sobic010G092400 Sobic010G092400 Sobic009G099150--Sobic010G092400 Sobic002G317700 Sobic002G317700 Sobic009G099150--Sobic002G317700 Sobic009G099150--Sobic010G023400 Sobic007G116800 Sobic007G116800 Sobic009G099150--Sobic007G116800 Sobic004G234500 Sobic004G234500 Sobic009G099150--Sobic004G234500
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.