Gene annotation
Transcriptome id Sobic.009G179300.1
Synonym Sb09g023970
Functional annotation OsFBX168 - F-box domain containing protein, expressed
UniProt C5Z075
Pfam -
Panther DB PTHR31215 PTHR31215:SF3
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G18380 : F-box family protein
RAP-DB (Rice) LOC_Os05g41130.1 : OsFBX168 - F-box domain containing protein, expressed
MaizeGDB (Corn) Zm00025a044065 , Zm00025a037829 , Zm00025a027131
Brachypodium PNT71021 , KQK05668
Barley HORVU0Hr1G030450.1 , HORVU1Hr1G068570.1
Wheat TraesCS3D02G518800
Populus -


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cDNA sequences
Sobic.009G179300


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G121300 nitrate-induced NOI protein, putative, expressed -
2 Sobic.005G228000 SNF7 domain containing protein, putative, expressed K12191: charged multivesicular body protein 2A
3 Sobic.001G019900 zinc finger, C3HC4 type domain containing protein, expressed K15707: RING finger protein 170
4 Sobic.005G095900 cysteine-rich receptor-like protein kinase 21 precursor, putative, expressed -
5 Sobic.003G249800 60S ribosomal protein L18a-1, putative, expressed -
6 Sobic.002G211900 zinc finger, C3HC4 type domain containing protein, expressed K16274: E3 ubiquitin-protein ligase AIP2
7 Sobic.002G212200 protein binding protein, putative, expressed K11975: E3 ubiquitin-protein ligase RNF144
8 Sobic.010G135000 thioredoxin reductase 2, putative, expressed K00384: trxB, thioredoxin reductase (NADPH)
9 Sobic.009G023200 glycine-rich protein A3, putative, expressed -
10 Sobic.001G459200 MYB family transcription factor, putative, expressed -
11 Sobic.002G312400 domain of unknown function domain containing protein, expressed -
12 Sobic.003G181500 ZOS1-09 - C2H2 zinc finger protein, expressed -
13 Sobic.004G049900 ubiquitin family protein, putative, expressed K08770: ubiquitin C
K08770: ubiquitin C
K04551: ubiquitin B
14 Sobic.004G157000 protein kinase domain containing protein, expressed K13430: serine/threonine-protein kinase PBS1
15 Sobic.002G046100 zinc finger A20 and AN1 domain-containing stress-associated protein, putative, expressed -
16 Sobic.002G345300 ZOS7-05 - C2H2 zinc finger protein, expressed -
17 Sobic.003G350300 ubiquitin-conjugating enzyme, putative, expressed K10575: UBE2G1, ubiquitin-conjugating enzyme E2 G1
18 Sobic.009G146100 RNA recognition motif containing protein, putative, expressed K12831: SF3B4, splicing factor 3B subunit 4
19 Sobic.010G047400 "HGW(Ortholog in rice:Li et al., 2012)"(PubMedID : 31659929)@proline-rich cell wall protein-like, putative, expressed -
20 Sobic.006G192500 CAMK_CAMK_like.27 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K13412: calcium-dependent protein kinase


Gene co-expression network
sample Sobic009G179300 Sobic009G179300 Sobic010G121300 Sobic010G121300 Sobic009G179300--Sobic010G121300 Sobic005G228000 Sobic005G228000 Sobic009G179300--Sobic005G228000 Sobic001G019900 Sobic001G019900 Sobic009G179300--Sobic001G019900 Sobic005G095900 Sobic005G095900 Sobic009G179300--Sobic005G095900 Sobic003G249800 Sobic003G249800 Sobic009G179300--Sobic003G249800 Sobic002G211900 Sobic002G211900 Sobic009G179300--Sobic002G211900 Sobic002G212200 Sobic002G212200 Sobic009G179300--Sobic002G212200 Sobic010G135000 Sobic010G135000 Sobic009G179300--Sobic010G135000 Sobic009G023200 Sobic009G023200 Sobic009G179300--Sobic009G023200 Sobic009G178100 Sobic009G178100 Sobic010G121300--Sobic009G178100 Sobic002G155500 Sobic002G155500 Sobic010G121300--Sobic002G155500 Sobic004G225500 Sobic004G225500 Sobic010G121300--Sobic004G225500 Sobic006G141500 Sobic006G141500 Sobic010G121300--Sobic006G141500 Sobic003G253000 Sobic003G253000 Sobic010G121300--Sobic003G253000 Sobic009G185800 Sobic009G185800 Sobic010G121300--Sobic009G185800 Sobic001G415500 Sobic001G415500 Sobic010G121300--Sobic001G415500 Sobic004G300900 Sobic004G300900 Sobic010G121300--Sobic004G300900 Sobic009G146100 Sobic009G146100 Sobic010G121300--Sobic009G146100 Sobic005G228000--Sobic001G019900 Sobic005G228000--Sobic002G212200 Sobic001G067601 Sobic001G067601 Sobic005G228000--Sobic001G067601 Sobic002G345300 Sobic002G345300 Sobic005G228000--Sobic002G345300 Sobic005G228000--Sobic009G023200 Sobic004G157000 Sobic004G157000 Sobic005G228000--Sobic004G157000 Sobic003G350300 Sobic003G350300 Sobic005G228000--Sobic003G350300 Sobic009G094450 Sobic009G094450 Sobic005G228000--Sobic009G094450 Sobic010G047400 Sobic010G047400 Sobic005G228000--Sobic010G047400 Sobic001G019900--Sobic001G067601 Sobic001G019900--Sobic005G228000 Sobic001G019900--Sobic009G023200 Sobic001G019900--Sobic003G350300 Sobic001G019900--Sobic003G249800 Sobic002G046100 Sobic002G046100 Sobic001G019900--Sobic002G046100 Sobic001G445800 Sobic001G445800 Sobic001G019900--Sobic001G445800 Sobic001G019900--Sobic002G212200 Sobic003G321700 Sobic003G321700 Sobic001G019900--Sobic003G321700 Sobic001G220400 Sobic001G220400 Sobic005G095900--Sobic001G220400 Sobic004G209900 Sobic004G209900 Sobic005G095900--Sobic004G209900 Sobic005G095900--Sobic005G228000 Sobic004G069850 Sobic004G069850 Sobic005G095900--Sobic004G069850 Sobic001G343900 Sobic001G343900 Sobic005G095900--Sobic001G343900 Sobic004G308400 Sobic004G308400 Sobic005G095900--Sobic004G308400 Sobic005G095900--Sobic010G121300 Sobic002G122700 Sobic002G122700 Sobic005G095900--Sobic002G122700 Sobic003G077900 Sobic003G077900 Sobic005G095900--Sobic003G077900 Sobic008G161000 Sobic008G161000 Sobic003G249800--Sobic008G161000 Sobic001G037000 Sobic001G037000 Sobic003G249800--Sobic001G037000 Sobic009G033700 Sobic009G033700 Sobic003G249800--Sobic009G033700 Sobic003G249800--Sobic002G046100 Sobic002G282400 Sobic002G282400 Sobic003G249800--Sobic002G282400 Sobic002G330000 Sobic002G330000 Sobic003G249800--Sobic002G330000 Sobic009G143400 Sobic009G143400 Sobic003G249800--Sobic009G143400 Sobic003G249800--Sobic002G211900 Sobic003G181500 Sobic003G181500 Sobic003G249800--Sobic003G181500 Sobic002G211900--Sobic003G249800 Sobic001G015100 Sobic001G015100 Sobic002G211900--Sobic001G015100 Sobic002G211900--Sobic003G181500 Sobic004G177700 Sobic004G177700 Sobic002G211900--Sobic004G177700 Sobic002G211900--Sobic002G046100 Sobic001G477300 Sobic001G477300 Sobic002G211900--Sobic001G477300 Sobic002G312400 Sobic002G312400 Sobic002G211900--Sobic002G312400 Sobic001G095300 Sobic001G095300 Sobic002G211900--Sobic001G095300 Sobic001G308300 Sobic001G308300 Sobic002G211900--Sobic001G308300 Sobic002G212200--Sobic005G228000 Sobic002G212200--Sobic001G019900 Sobic002G212200--Sobic001G067601 Sobic007G107000 Sobic007G107000 Sobic002G212200--Sobic007G107000 Sobic002G212200--Sobic003G181500 Sobic003G162700 Sobic003G162700 Sobic002G212200--Sobic003G162700 Sobic002G212200--Sobic009G023200 Sobic002G212200--Sobic002G282400 Sobic001G064800 Sobic001G064800 Sobic002G212200--Sobic001G064800 Sobic003G130800 Sobic003G130800 Sobic010G135000--Sobic003G130800 Sobic006G180200 Sobic006G180200 Sobic010G135000--Sobic006G180200 Sobic010G135000--Sobic002G345300 Sobic010G135000--Sobic003G181500 Sobic001G459200 Sobic001G459200 Sobic010G135000--Sobic001G459200 Sobic010G135000--Sobic009G023200 Sobic010G135000--Sobic003G350300 Sobic004G330700 Sobic004G330700 Sobic010G135000--Sobic004G330700 Sobic010G135000--Sobic009G185800 Sobic004G187900 Sobic004G187900 Sobic009G023200--Sobic004G187900 Sobic010G204600 Sobic010G204600 Sobic009G023200--Sobic010G204600 Sobic003G063200 Sobic003G063200 Sobic009G023200--Sobic003G063200 Sobic009G023200--Sobic001G067601 Sobic009G023200--Sobic002G046100 Sobic002G245800 Sobic002G245800 Sobic009G023200--Sobic002G245800 Sobic009G023200--Sobic003G181500 Sobic003G202200 Sobic003G202200 Sobic009G023200--Sobic003G202200 Sobic005G196800 Sobic005G196800 Sobic009G023200--Sobic005G196800
Octagon: transcription factors


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