Gene annotation
Transcriptome id Sobic.009G204601.1
Synonym -
Functional annotation -
UniProt A0A1Z5R3J0
Pfam PF05193 PF00675 PF00365
Panther DB PTHR13697 PTHR13697:SF28
NCBI CDD KOG2067; Mitochondrial processing peptidase, alpha subunit
KEGG Orthology K00850; pfkA, 6-phosphofructokinase 1
Gene Ontology GO:0006096; glycolytic process GO:00038726-phosphofructokinase activity


Orthologs (automatic annotation)
TAIR AT4G26270 : phosphofructokinase 3
RAP-DB (Rice) LOC_Os05g44922.1 : 6-phosphofructokinase, putative, expressed
MaizeGDB (Corn) Zm00025a055916 , Zm00025a041554 , Zm00025a000187 , Zm00025a018935 , Zm00025a044302 , Zm00025a044301 , Zm00025a046153 , Zm00025a032504 , Zm00025a027670
Brachypodium KQK05301 , KQK05303 , KQK05302 , KQK09640 , KQK09639
Barley HORVU3Hr1G070300.21 , HORVU3Hr1G070300.19 , HORVU3Hr1G070300.18 , HORVU3Hr1G070300.11 , HORVU3Hr1G070300.10 , HORVU3Hr1G070300.13 , HORVU3Hr1G070300.12 , HORVU3Hr1G070300.15 , HORVU3Hr1G070300.14 , HORVU3Hr1G070300.17 , HORVU3Hr1G070300.16 , HORVU3Hr1G070300.20 , HORVU3Hr1G070300.9 , HORVU3Hr1G070300.8 , HORVU3Hr1G070300.5 , HORVU3Hr1G070300.4 , HORVU3Hr1G070300.1 , HORVU3Hr1G070300.3 , HORVU3Hr1G070300.2 , HORVU1Hr1G075540.2 , HORVU1Hr1G075540.3 , HORVU1Hr1G075540.1 , HORVU1Hr1G075540.6 , HORVU1Hr1G075540.7 , HORVU1Hr1G075540.4 , HORVU1Hr1G075540.5 , HORVU1Hr1G075540.8 , HORVU1Hr1G075550.9 , HORVU1Hr1G075550.8 , HORVU1Hr1G075550.1 , HORVU1Hr1G075550.3 , HORVU1Hr1G075550.2 , HORVU1Hr1G075550.5 , HORVU1Hr1G075550.4 , HORVU1Hr1G075550.7 , HORVU1Hr1G075550.6 , HORVU3Hr1G070300.7 , HORVU3Hr1G070300.6
Wheat TraesCS1D02G346100 , TraesCS1D02G346200 , TraesCS1D02G346200 , TraesCS3B02G311900 , TraesCS1A02G344000 , TraesCS3A02G277700 , TraesCS3B02G311900 , TraesCS3B02G311900 , TraesCS3A02G277600 , TraesCS3A02G277600 , TraesCS3D02G278000 , TraesCS1B02G357000 , TraesCS3B02G311800 , TraesCS1B02G356900
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G267200 pyruvate kinase, putative, expressed K00873: PK, pyruvate kinase
2 Sobic.004G146000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@fructose-bisphospate aldolase isozyme, putative, expressed K01623: fructose-bisphosphate aldolase, class I
3 Sobic.005G103500 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@dehydrogenase, putative, expressed -
4 Sobic.003G288600 reticulon domain containing protein, putative, expressed -
5 Sobic.003G072300 triosephosphate isomerase(PubMedID : 27016024)@triosephosphate isomerase, cytosolic, putative, expressed K01803: TPI, triosephosphate isomerase (TIM)
6 Sobic.003G310700 mal d 1-associated protein, putative, expressed -
7 Sobic.001G350600 cytochrome c oxidase subunit, putative, expressed K02267: cytochrome c oxidase subunit 6b
8 Sobic.009G063900 expressed protein -
9 Sobic.009G217000 chaperone protein dnaJ 10, putative, expressed -
10 Sobic.010G220200 haloacid dehalogenase-like hydrolase domain-containing protein 3, putative, expressed -
11 Sobic.003G209000 mitochondrial ATP synthase g subunit family protein, putative, expressed K02140: ATPeFG, ATP5L, F-type H+-transporting ATPase subunit g
12 Sobic.001G101500 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@endoplasmic oxidoreductin-1 precursor, putative, expressed K10950: ERO1-like protein alpha
13 Sobic.009G141800 cytochrome c, putative, expressed K08738: cytochrome c
14 Sobic.004G259200 mitochondrial carrier protein, putative, expressed K05863: SLC25A4S, solute carrier family 25 (mitochondrial adenine nucleotide translocator), member 4/5/6/31
15 Sobic.001G405500 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@pyruvate decarboxylase isozyme 2, putative, expressed K01568: PDC, pyruvate decarboxylase
16 Sobic.010G086200 GRAM domain containing protein, expressed -
17 Sobic.004G170400 ubiquinol-cytochrome C reductase hinge protein, putative, expressed K00416: QCR6, ubiquinol-cytochrome c reductase subunit 6
18 Sobic.001G018500 expressed protein K17784: MINOS1, mitochondrial inner membrane organizing system protein 1
19 Sobic.004G065500 chorismate mutase, chloroplast precursor, putative, expressed K01850: chorismate mutase
20 Sobic.004G036600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@activator of 90 kDa heat shock protein ATPase homolog, putative, expressed -


Gene co-expression network
sample Sobic009G204601 Sobic009G204601 Sobic006G267200 Sobic006G267200 Sobic009G204601--Sobic006G267200 Sobic004G146000 Sobic004G146000 Sobic009G204601--Sobic004G146000 Sobic005G103500 Sobic005G103500 Sobic009G204601--Sobic005G103500 Sobic003G288600 Sobic003G288600 Sobic009G204601--Sobic003G288600 Sobic003G072300 Sobic003G072300 Sobic009G204601--Sobic003G072300 Sobic003G310700 Sobic003G310700 Sobic009G204601--Sobic003G310700 Sobic001G350600 Sobic001G350600 Sobic009G204601--Sobic001G350600 Sobic009G063900 Sobic009G063900 Sobic009G204601--Sobic009G063900 Sobic009G217000 Sobic009G217000 Sobic009G204601--Sobic009G217000 Sobic001G459800 Sobic001G459800 Sobic006G267200--Sobic001G459800 Sobic004G065500 Sobic004G065500 Sobic006G267200--Sobic004G065500 Sobic003G393900 Sobic003G393900 Sobic006G267200--Sobic003G393900 Sobic001G405500 Sobic001G405500 Sobic006G267200--Sobic001G405500 Sobic009G141800 Sobic009G141800 Sobic006G267200--Sobic009G141800 Sobic010G086200 Sobic010G086200 Sobic006G267200--Sobic010G086200 Sobic006G267200--Sobic004G146000 Sobic004G141200 Sobic004G141200 Sobic006G267200--Sobic004G141200 Sobic001G320900 Sobic001G320900 Sobic006G267200--Sobic001G320900 Sobic004G146000--Sobic003G393900 Sobic004G146000--Sobic006G267200 Sobic004G146000--Sobic001G459800 Sobic001G108200 Sobic001G108200 Sobic004G146000--Sobic001G108200 Sobic004G146000--Sobic001G405500 Sobic004G146000--Sobic004G141200 Sobic004G146000--Sobic004G065500 Sobic003G355100 Sobic003G355100 Sobic004G146000--Sobic003G355100 Sobic003G148600 Sobic003G148600 Sobic004G146000--Sobic003G148600 Sobic005G103500--Sobic001G405500 Sobic001G397200 Sobic001G397200 Sobic005G103500--Sobic001G397200 Sobic005G103300 Sobic005G103300 Sobic005G103500--Sobic005G103300 Sobic001G481600 Sobic001G481600 Sobic005G103500--Sobic001G481600 Sobic007G026600 Sobic007G026600 Sobic005G103500--Sobic007G026600 Sobic001G309600 Sobic001G309600 Sobic005G103500--Sobic001G309600 Sobic008G070350 Sobic008G070350 Sobic005G103500--Sobic008G070350 Sobic003G387000 Sobic003G387000 Sobic005G103500--Sobic003G387000 Sobic006G032700 Sobic006G032700 Sobic005G103500--Sobic006G032700 Sobic003G288600--Sobic006G267200 Sobic010G217800 Sobic010G217800 Sobic003G288600--Sobic010G217800 Sobic010G220200 Sobic010G220200 Sobic003G288600--Sobic010G220200 Sobic006G231100 Sobic006G231100 Sobic003G288600--Sobic006G231100 Sobic008G177800 Sobic008G177800 Sobic003G288600--Sobic008G177800 Sobic003G288600--Sobic009G141800 Sobic002G415600 Sobic002G415600 Sobic003G288600--Sobic002G415600 Sobic001G477300 Sobic001G477300 Sobic003G288600--Sobic001G477300 Sobic003G288600--Sobic005G103300 Sobic002G081600 Sobic002G081600 Sobic003G072300--Sobic002G081600 Sobic004G205100 Sobic004G205100 Sobic003G072300--Sobic004G205100 Sobic002G187500 Sobic002G187500 Sobic003G072300--Sobic002G187500 Sobic003G209000 Sobic003G209000 Sobic003G072300--Sobic003G209000 Sobic002G190900 Sobic002G190900 Sobic003G072300--Sobic002G190900 Sobic006G213000 Sobic006G213000 Sobic003G072300--Sobic006G213000 Sobic010G204500 Sobic010G204500 Sobic003G072300--Sobic010G204500 Sobic003G155400 Sobic003G155400 Sobic003G072300--Sobic003G155400 Sobic002G379500 Sobic002G379500 Sobic003G072300--Sobic002G379500 Sobic001G426000 Sobic001G426000 Sobic003G310700--Sobic001G426000 Sobic001G032800 Sobic001G032800 Sobic003G310700--Sobic001G032800 Sobic004G228900 Sobic004G228900 Sobic003G310700--Sobic004G228900 Sobic004G036600 Sobic004G036600 Sobic003G310700--Sobic004G036600 Sobic003G310700--Sobic009G217000 Sobic003G310700--Sobic006G267200 Sobic009G169000 Sobic009G169000 Sobic003G310700--Sobic009G169000 Sobic010G223600 Sobic010G223600 Sobic003G310700--Sobic010G223600 Sobic006G194000 Sobic006G194000 Sobic003G310700--Sobic006G194000 Sobic004G170400 Sobic004G170400 Sobic001G350600--Sobic004G170400 Sobic004G259200 Sobic004G259200 Sobic001G350600--Sobic004G259200 Sobic002G356400 Sobic002G356400 Sobic001G350600--Sobic002G356400 Sobic001G074700 Sobic001G074700 Sobic001G350600--Sobic001G074700 Sobic001G465800 Sobic001G465800 Sobic001G350600--Sobic001G465800 Sobic001G350600--Sobic003G209000 Sobic001G404800 Sobic001G404800 Sobic001G350600--Sobic001G404800 Sobic009G119900 Sobic009G119900 Sobic001G350600--Sobic009G119900 Sobic004G030000 Sobic004G030000 Sobic001G350600--Sobic004G030000 Sobic006G275200 Sobic006G275200 Sobic009G063900--Sobic006G275200 Sobic001G097600 Sobic001G097600 Sobic009G063900--Sobic001G097600 Sobic002G393000 Sobic002G393000 Sobic009G063900--Sobic002G393000 Sobic003G086600 Sobic003G086600 Sobic009G063900--Sobic003G086600 Sobic004G280200 Sobic004G280200 Sobic009G063900--Sobic004G280200 Sobic009G063900--Sobic004G205100 Sobic009G183400 Sobic009G183400 Sobic009G063900--Sobic009G183400 Sobic009G063900--Sobic001G405500 Sobic009G063900--Sobic001G309600 Sobic009G217000--Sobic004G036600 Sobic003G094200 Sobic003G094200 Sobic009G217000--Sobic003G094200 Sobic009G217000--Sobic003G310700 Sobic010G065900 Sobic010G065900 Sobic009G217000--Sobic010G065900 Sobic006G131400 Sobic006G131400 Sobic009G217000--Sobic006G131400 Sobic009G217000--Sobic004G065500 Sobic009G217000--Sobic009G141800 Sobic005G028700 Sobic005G028700 Sobic009G217000--Sobic005G028700 Sobic009G217000--Sobic006G267200
Octagon: transcription factors


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