Gene annotation
Transcriptome id Sobic.009G238500.1
Synonym Sb09g029070,ethylene response factor 98, SbERF98
Functional annotation SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence. (PubMedID : 27586543)
Not investigated (PubMedID : 23766026)
AP2 domain containing protein, expressed
UniProt C5YW01
Pfam PF00847
Panther DB PTHR31657 PTHR31657:SF8
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0006355; regulation of transcription, DNA-templated GO:0003700DNA-binding transcription factor activity


Orthologs (automatic annotation)
TAIR AT1G64380 : Integrase-type DNA-binding superfamily protein
RAP-DB (Rice) LOC_Os05g49700.1 : AP2 domain containing protein, expressed
MaizeGDB (Corn) Zm00025a057202 , Zm00025a009545 , Zm00025a046712 , Zm00025a036658 , Zm00025a049905 , Zm00025a044642 , Zm00025a022123 , Zm00025a041622
Brachypodium KQK01869 , KQK18916 , KQK19450 , KQJ98221 , PNT67305 , KQJ83714
Barley HORVU1Hr1G090250.1 , HORVU1Hr1G090250.2
Wheat TraesCS2D02G511600 , TraesCS4A02G035400
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G055600 prenylated rab acceptor, putative, expressed -
2 Sobic.003G364600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@glycosyl hydrolases family 17, putative, expressed -
3 Sobic.003G324400 Not investigated(PubMedID : 23766026)@Contribute to rice salt tolerance under a salt inducible abscisic acid 2 (ABA2) promoter(PubMedID : 28393269)@AP2 domain containing protein, expressed -
4 Sobic.006G158266 - -
5 Sobic.007G074000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./middle senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@- -
6 Sobic.001G204900 cystathionin beta synthase protein, putative, expressed -
7 Sobic.003G063200 uncharacterized Cys-rich domain containing protein, putative, expressed -
8 Sobic.003G092900 expressed protein -
9 Sobic.009G247900 similar to Putative late embryogenesis abundant protein(PubMedID : 29862293)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@late embryogenesis abundant protein, putative, expressed -
10 Sobic.003G021500 sodium/calcium exchanger protein, putative, expressed -
11 Sobic.001G037000 PHD finger protein, putative, expressed -
12 Sobic.004G247200 erwinia induced protein 2, putative, expressed -
13 Sobic.006G263600 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
14 Sobic.004G306300 expressed protein -
15 Sobic.002G336600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@nucleoside transporter, putative, expressed K15014: SLC29A1_2_3, solute carrier family 29 (equilibrative nucleoside transporter), member 1/2/3
16 Sobic.001G308300 expressed protein -
17 Sobic.003G202200 uncharacterized protein PA4923, putative, expressed K06966: pyrimidine/purine-5'-nucleotide nucleosidase
18 Sobic.002G359300 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@ZOS7-07 - C2H2 zinc finger protein, expressed -
19 Sobic.009G023200 glycine-rich protein A3, putative, expressed -
20 Sobic.004G229800 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@cytokinin-O-glucosyltransferase 2, putative, expressed -


Gene co-expression network
sample Sobic009G238500 Sobic009G238500 Sobic001G055600 Sobic001G055600 Sobic009G238500--Sobic001G055600 Sobic003G364600 Sobic003G364600 Sobic009G238500--Sobic003G364600 Sobic003G324400 Sobic003G324400 Sobic009G238500--Sobic003G324400 Sobic006G158266 Sobic006G158266 Sobic009G238500--Sobic006G158266 Sobic007G074000 Sobic007G074000 Sobic009G238500--Sobic007G074000 Sobic001G204900 Sobic001G204900 Sobic009G238500--Sobic001G204900 Sobic003G063200 Sobic003G063200 Sobic009G238500--Sobic003G063200 Sobic003G092900 Sobic003G092900 Sobic009G238500--Sobic003G092900 Sobic009G247900 Sobic009G247900 Sobic009G238500--Sobic009G247900 Sobic001G390300 Sobic001G390300 Sobic001G055600--Sobic001G390300 Sobic001G055600--Sobic007G074000 Sobic002G407900 Sobic002G407900 Sobic001G055600--Sobic002G407900 Sobic009G159400 Sobic009G159400 Sobic001G055600--Sobic009G159400 Sobic001G481100 Sobic001G481100 Sobic001G055600--Sobic001G481100 Sobic004G065500 Sobic004G065500 Sobic001G055600--Sobic004G065500 Sobic002G336600 Sobic002G336600 Sobic001G055600--Sobic002G336600 Sobic003G228900 Sobic003G228900 Sobic001G055600--Sobic003G228900 Sobic001G055600--Sobic009G247900 Sobic003G364600--Sobic007G074000 Sobic004G141200 Sobic004G141200 Sobic003G364600--Sobic004G141200 Sobic007G036900 Sobic007G036900 Sobic003G364600--Sobic007G036900 Sobic003G369100 Sobic003G369100 Sobic003G364600--Sobic003G369100 Sobic001G308300 Sobic001G308300 Sobic003G364600--Sobic001G308300 Sobic002G140400 Sobic002G140400 Sobic003G364600--Sobic002G140400 Sobic006G158600 Sobic006G158600 Sobic003G364600--Sobic006G158600 Sobic001G391500 Sobic001G391500 Sobic003G364600--Sobic001G391500 Sobic003G339500 Sobic003G339500 Sobic003G364600--Sobic003G339500 Sobic006G165100 Sobic006G165100 Sobic003G324400--Sobic006G165100 Sobic001G040200 Sobic001G040200 Sobic003G324400--Sobic001G040200 Sobic002G140300 Sobic002G140300 Sobic003G324400--Sobic002G140300 Sobic009G036100 Sobic009G036100 Sobic003G324400--Sobic009G036100 Sobic006G263600 Sobic006G263600 Sobic003G324400--Sobic006G263600 Sobic003G324400--Sobic009G247900 Sobic002G405600 Sobic002G405600 Sobic003G324400--Sobic002G405600 Sobic003G313800 Sobic003G313800 Sobic003G324400--Sobic003G313800 Sobic002G282300 Sobic002G282300 Sobic003G324400--Sobic002G282300 Sobic006G158266--Sobic001G055600 Sobic003G265200 Sobic003G265200 Sobic006G158266--Sobic003G265200 Sobic006G158200 Sobic006G158200 Sobic006G158266--Sobic006G158200 Sobic002G356101 Sobic002G356101 Sobic006G158266--Sobic002G356101 Sobic009G074100 Sobic009G074100 Sobic006G158266--Sobic009G074100 Sobic004G306300 Sobic004G306300 Sobic006G158266--Sobic004G306300 Sobic006G157500 Sobic006G157500 Sobic006G158266--Sobic006G157500 Sobic009G184000 Sobic009G184000 Sobic006G158266--Sobic009G184000 Sobic006G158266--Sobic007G074000 Sobic007G074000--Sobic003G369100 Sobic007G074000--Sobic004G141200 Sobic004G237800 Sobic004G237800 Sobic007G074000--Sobic004G237800 Sobic007G074000--Sobic002G140400 Sobic007G074000--Sobic003G228900 Sobic007G074000--Sobic002G336600 Sobic007G074000--Sobic003G364600 Sobic001G138600 Sobic001G138600 Sobic007G074000--Sobic001G138600 Sobic007G074000--Sobic009G247900 Sobic001G204900--Sobic006G263600 Sobic001G204900--Sobic003G324400 Sobic010G223600 Sobic010G223600 Sobic001G204900--Sobic010G223600 Sobic010G204600 Sobic010G204600 Sobic001G204900--Sobic010G204600 Sobic001G204900--Sobic002G405600 Sobic004G169200 Sobic004G169200 Sobic001G204900--Sobic004G169200 Sobic001G204900--Sobic009G238500 Sobic001G422900 Sobic001G422900 Sobic001G204900--Sobic001G422900 Sobic001G295700 Sobic001G295700 Sobic001G204900--Sobic001G295700 Sobic005G028700 Sobic005G028700 Sobic003G063200--Sobic005G028700 Sobic003G063200--Sobic010G204600 Sobic004G247200 Sobic004G247200 Sobic003G063200--Sobic004G247200 Sobic003G063200--Sobic001G055600 Sobic001G037000 Sobic001G037000 Sobic003G063200--Sobic001G037000 Sobic009G023200 Sobic009G023200 Sobic003G063200--Sobic009G023200 Sobic003G063200--Sobic001G390300 Sobic003G063200--Sobic004G306300 Sobic003G063200--Sobic002G407900 Sobic003G093000 Sobic003G093000 Sobic003G092900--Sobic003G093000 Sobic004G222500 Sobic004G222500 Sobic003G092900--Sobic004G222500 Sobic002G220000 Sobic002G220000 Sobic003G092900--Sobic002G220000 Sobic001G247300 Sobic001G247300 Sobic003G092900--Sobic001G247300 Sobic003G092900--Sobic002G140300 Sobic003G430400 Sobic003G430400 Sobic003G092900--Sobic003G430400 Sobic003G092900--Sobic009G247900 Sobic001G267600 Sobic001G267600 Sobic003G092900--Sobic001G267600 Sobic002G189100 Sobic002G189100 Sobic003G092900--Sobic002G189100 Sobic009G247900--Sobic007G074000 Sobic003G202200 Sobic003G202200 Sobic009G247900--Sobic003G202200 Sobic001G383700 Sobic001G383700 Sobic009G247900--Sobic001G383700 Sobic009G247900--Sobic003G228900 Sobic003G428700 Sobic003G428700 Sobic009G247900--Sobic003G428700 Sobic010G209200 Sobic010G209200 Sobic009G247900--Sobic010G209200 Sobic009G247900--Sobic009G036100 Sobic009G036000 Sobic009G036000 Sobic009G247900--Sobic009G036000 Sobic004G341800 Sobic004G341800 Sobic009G247900--Sobic004G341800
Octagon: transcription factors


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