Gene annotation
Transcriptome id Sobic.010G036500.1
Synonym Sb10g003270
Functional annotation expressed protein
UniProt C5Z3Y2
Pfam -
Panther DB PTHR33120
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os06g05430.1 : expressed protein
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G155600 exo70 exocyst complex subunit family protein, putative, expressed -
2 Sobic.001G525200 expressed protein -
3 Sobic.003G145400 expressed protein -
4 Sobic.005G063300 Fatty acid reductase 4 FAR4 (At)(PubMedID : 27208977)@male sterility protein, putative, expressed K13356: alcohol-forming fatty acyl-CoA reductase
5 Sobic.009G066800 - -
6 Sobic.006G217900 Leucine-rich receptor-like protein kinase("PubMedID : 26759170,PubMedID : 24597475")@leucine-rich repeat receptor protein kinase EXS precursor, putative, expressed K13420: LRR receptor-like serine/threonine-protein kinase FLS2
7 Sobic.004G236100 laccase precursor protein, putative, expressed K05909: laccase
8 Sobic.001G354200 O-methyltransferase, putative, expressed -
9 Sobic.001G430600 cytochrome P450, putative, expressed -
10 Sobic.006G230700 wound induced protein, putative, expressed -
11 Sobic.007G005700 expressed protein -
12 Sobic.008G050500 MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
13 Sobic.009G209500 RING/U-box superfamily protein("PubMedID : 26759170,PubMedID : 24597475")@zinc finger, C3HC4 type domain containing protein, expressed K10664: E3 ubiquitin-protein ligase ATL6/9/15/31/42/55
14 Sobic.010G092200 sphingolipid C4-hydroxylase SUR2, putative, expressed K04713: sphinganine C4-monooxygenase
15 Sobic.007G032700 - -
16 Sobic.009G111200 Not investigated(PubMedID : 23766026)@AP2 domain containing protein, expressed -
17 Sobic.005G103500 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@dehydrogenase, putative, expressed -
18 Sobic.010G031100 Decreased expression in phyB-1 mutant(PubMedID : 26893475)@early nodulin 93 ENOD93 protein, putative, expressed -
19 Sobic.009G182900 - -
20 Sobic.010G275100 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@Ser/Thr-rich protein T10 in DGCR region, putative, expressed -


Gene co-expression network
sample Sobic010G036500 Sobic010G036500 Sobic003G155600 Sobic003G155600 Sobic010G036500--Sobic003G155600 Sobic001G525200 Sobic001G525200 Sobic010G036500--Sobic001G525200 Sobic003G145400 Sobic003G145400 Sobic010G036500--Sobic003G145400 Sobic005G063300 Sobic005G063300 Sobic010G036500--Sobic005G063300 Sobic009G066800 Sobic009G066800 Sobic010G036500--Sobic009G066800 Sobic006G217900 Sobic006G217900 Sobic010G036500--Sobic006G217900 Sobic004G236100 Sobic004G236100 Sobic010G036500--Sobic004G236100 Sobic001G354200 Sobic001G354200 Sobic010G036500--Sobic001G354200 Sobic001G430600 Sobic001G430600 Sobic010G036500--Sobic001G430600 Sobic007G005700 Sobic007G005700 Sobic003G155600--Sobic007G005700 Sobic006G143400 Sobic006G143400 Sobic003G155600--Sobic006G143400 Sobic003G271500 Sobic003G271500 Sobic003G155600--Sobic003G271500 Sobic003G155600--Sobic005G063300 Sobic001G449600 Sobic001G449600 Sobic003G155600--Sobic001G449600 Sobic009G217700 Sobic009G217700 Sobic003G155600--Sobic009G217700 Sobic005G005600 Sobic005G005600 Sobic003G155600--Sobic005G005600 Sobic001G054500 Sobic001G054500 Sobic003G155600--Sobic001G054500 Sobic003G364300 Sobic003G364300 Sobic003G155600--Sobic003G364300 Sobic001G525200--Sobic003G145400 Sobic002G104200 Sobic002G104200 Sobic001G525200--Sobic002G104200 Sobic001G525200--Sobic004G236100 Sobic009G069800 Sobic009G069800 Sobic001G525200--Sobic009G069800 Sobic008G162700 Sobic008G162700 Sobic001G525200--Sobic008G162700 Sobic002G042000 Sobic002G042000 Sobic001G525200--Sobic002G042000 Sobic010G031100 Sobic010G031100 Sobic001G525200--Sobic010G031100 Sobic004G336500 Sobic004G336500 Sobic001G525200--Sobic004G336500 Sobic004G067600 Sobic004G067600 Sobic001G525200--Sobic004G067600 Sobic003G145400--Sobic001G525200 Sobic006G230700 Sobic006G230700 Sobic003G145400--Sobic006G230700 Sobic003G145400--Sobic009G069800 Sobic003G145400--Sobic010G031100 Sobic003G145400--Sobic008G162700 Sobic006G190500 Sobic006G190500 Sobic003G145400--Sobic006G190500 Sobic006G230800 Sobic006G230800 Sobic003G145400--Sobic006G230800 Sobic003G145400--Sobic004G236100 Sobic003G145400--Sobic004G336500 Sobic005G063300--Sobic007G005700 Sobic005G063300--Sobic003G155600 Sobic003G255200 Sobic003G255200 Sobic005G063300--Sobic003G255200 Sobic010G015300 Sobic010G015300 Sobic005G063300--Sobic010G015300 Sobic008G144600 Sobic008G144600 Sobic005G063300--Sobic008G144600 Sobic001G039200 Sobic001G039200 Sobic005G063300--Sobic001G039200 Sobic001G082600 Sobic001G082600 Sobic005G063300--Sobic001G082600 Sobic010G092200 Sobic010G092200 Sobic005G063300--Sobic010G092200 Sobic004G245600 Sobic004G245600 Sobic005G063300--Sobic004G245600 Sobic002G036150 Sobic002G036150 Sobic009G066800--Sobic002G036150 Sobic005G010200 Sobic005G010200 Sobic009G066800--Sobic005G010200 Sobic010G200700 Sobic010G200700 Sobic009G066800--Sobic010G200700 Sobic009G247300 Sobic009G247300 Sobic009G066800--Sobic009G247300 Sobic002G036100 Sobic002G036100 Sobic009G066800--Sobic002G036100 Sobic009G111200 Sobic009G111200 Sobic009G066800--Sobic009G111200 Sobic006G089300 Sobic006G089300 Sobic009G066800--Sobic006G089300 Sobic010G041700 Sobic010G041700 Sobic009G066800--Sobic010G041700 Sobic002G359300 Sobic002G359300 Sobic009G066800--Sobic002G359300 Sobic002G115025 Sobic002G115025 Sobic006G217900--Sobic002G115025 Sobic006G217900--Sobic001G054500 Sobic006G217900--Sobic002G042000 Sobic001G256200 Sobic001G256200 Sobic006G217900--Sobic001G256200 Sobic005G108601 Sobic005G108601 Sobic006G217900--Sobic005G108601 Sobic006G217900--Sobic003G155600 Sobic006G217900--Sobic003G364300 Sobic006G217900--Sobic001G525200 Sobic007G008100 Sobic007G008100 Sobic006G217900--Sobic007G008100 Sobic004G236100--Sobic004G336500 Sobic004G236100--Sobic009G069800 Sobic004G236100--Sobic007G008100 Sobic004G236100--Sobic001G054500 Sobic004G236100--Sobic002G042000 Sobic004G236100--Sobic001G525200 Sobic010G032100 Sobic010G032100 Sobic004G236100--Sobic010G032100 Sobic009G229000 Sobic009G229000 Sobic004G236100--Sobic009G229000 Sobic004G236100--Sobic001G354200 Sobic006G032700 Sobic006G032700 Sobic001G354200--Sobic006G032700 Sobic001G397200 Sobic001G397200 Sobic001G354200--Sobic001G397200 Sobic010G275100 Sobic010G275100 Sobic001G354200--Sobic010G275100 Sobic001G354200--Sobic010G032100 Sobic003G138300 Sobic003G138300 Sobic001G354200--Sobic003G138300 Sobic001G481500 Sobic001G481500 Sobic001G354200--Sobic001G481500 Sobic001G309600 Sobic001G309600 Sobic001G354200--Sobic001G309600 Sobic004G245500 Sobic004G245500 Sobic001G354200--Sobic004G245500 Sobic001G354200--Sobic009G229000 Sobic002G347100 Sobic002G347100 Sobic001G430600--Sobic002G347100 Sobic007G166000 Sobic007G166000 Sobic001G430600--Sobic007G166000 Sobic008G050500 Sobic008G050500 Sobic001G430600--Sobic008G050500 Sobic002G248201 Sobic002G248201 Sobic001G430600--Sobic002G248201 Sobic001G430600--Sobic001G481500 Sobic001G430600--Sobic010G032100 Sobic003G202000 Sobic003G202000 Sobic001G430600--Sobic003G202000 Sobic001G430600--Sobic001G525200 Sobic001G430600--Sobic005G005600
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.