Gene annotation
Transcriptome id Sobic.010G075200.2,Sobic.010G075200.1
Synonym
Functional annotation expressed protein
UniProt A0A194YHU7 , A0A194YHW6
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os06g09940.1 : expressed protein
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G075300 - -
2 Sobic.010G075500 expressed protein -
3 Sobic.010G070000 cytochrome P450 72A1, putative, expressed K15639: CYP734A1, PHYB activation tagged suppressor 1
4 Sobic.009G071300 HAD superfamily phosphatase, putative, expressed -
5 Sobic.009G024600 "RSR1(Ortholog in rice:Fu and Xue, 2010)"(PubMedID : 31659916)@"AP2-like TF, coexpress with genes associated with the hormonesignaling pathway, floral development in Arabidopsis"(PubMedID : 28944535)@AP2 domain containing protein, expressed K09284: AP2-like factor, euAP2 lineage
6 Sobic.010G062100 expressed protein -
7 Sobic.007G066500 Cupin domain containing protein, expressed -
8 Sobic.010G208900 expressed protein -
9 Sobic.004G207200 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@helix-loop-helix DNA-binding domain containing protein, expressed -
10 Sobic.005G230200 GRAS family transcription factor domain containing protein, expressed -
11 Sobic.001G237400 heavy-metal-associated domain-containing protein, putative, expressed -
12 Sobic.005G075400 CHASE domain containing protein, expressed -
13 Sobic.002G221800 similar to Protein HVA22(PubMedID : 29862293)@HVA22, putative, expressed K17279: receptor expression-enhancing protein 5/6
14 Sobic.006G031200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@DSBA-like thioredoxin domain containing protein, expressed -
15 Sobic.001G240500 flavoprotein wrbA, putative, expressed K03809: NAD(P)H dehydrogenase (quinone)
16 Sobic.005G224300 O-methyltransferase, putative, expressed -
17 Sobic.002G337100 nucleoside transporter, putative, expressed K15014: SLC29A1_2_3, solute carrier family 29 (equilibrative nucleoside transporter), member 1/2/3
18 Sobic.001G144400 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@acetyltransferase, GNAT family, putative, expressed -
19 Sobic.001G284600 xyloglucan endotransglucosylase/hydrolase 29(PubMedID : 26465154)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@glycosyl hydrolases family 16, putative, expressed K08235: xyloglucan:xyloglucosyl transferase
20 Sobic.002G067300 ATPase, putative, expressed -


Gene co-expression network
sample Sobic010G075200 Sobic010G075200 Sobic010G075300 Sobic010G075300 Sobic010G075200--Sobic010G075300 Sobic010G075500 Sobic010G075500 Sobic010G075200--Sobic010G075500 Sobic010G070000 Sobic010G070000 Sobic010G075200--Sobic010G070000 Sobic009G071300 Sobic009G071300 Sobic010G075200--Sobic009G071300 Sobic009G024600 Sobic009G024600 Sobic010G075200--Sobic009G024600 Sobic010G062100 Sobic010G062100 Sobic010G075200--Sobic010G062100 Sobic007G066500 Sobic007G066500 Sobic010G075200--Sobic007G066500 Sobic010G208900 Sobic010G208900 Sobic010G075200--Sobic010G208900 Sobic004G207200 Sobic004G207200 Sobic010G075200--Sobic004G207200 Sobic010G075300--Sobic010G075200 Sobic010G075300--Sobic010G075500 Sobic004G220500 Sobic004G220500 Sobic010G075300--Sobic004G220500 Sobic010G075300--Sobic007G066500 Sobic002G268966 Sobic002G268966 Sobic010G075300--Sobic002G268966 Sobic007G067608 Sobic007G067608 Sobic010G075300--Sobic007G067608 Sobic006G053651 Sobic006G053651 Sobic010G075300--Sobic006G053651 Sobic010G097900 Sobic010G097900 Sobic010G075300--Sobic010G097900 Sobic007G073500 Sobic007G073500 Sobic010G075300--Sobic007G073500 Sobic001G237400 Sobic001G237400 Sobic010G075500--Sobic001G237400 Sobic002G379201 Sobic002G379201 Sobic010G075500--Sobic002G379201 Sobic010G075500--Sobic007G067608 Sobic010G075500--Sobic007G066500 Sobic004G140850 Sobic004G140850 Sobic010G075500--Sobic004G140850 Sobic010G259266 Sobic010G259266 Sobic010G075500--Sobic010G259266 Sobic002G315900 Sobic002G315900 Sobic010G075500--Sobic002G315900 Sobic010G070000--Sobic009G071300 Sobic005G202400 Sobic005G202400 Sobic010G070000--Sobic005G202400 Sobic002G326500 Sobic002G326500 Sobic010G070000--Sobic002G326500 Sobic010G102500 Sobic010G102500 Sobic010G070000--Sobic010G102500 Sobic005G041200 Sobic005G041200 Sobic010G070000--Sobic005G041200 Sobic005G224300 Sobic005G224300 Sobic010G070000--Sobic005G224300 Sobic006G150700 Sobic006G150700 Sobic010G070000--Sobic006G150700 Sobic003G060200 Sobic003G060200 Sobic010G070000--Sobic003G060200 Sobic001G256000 Sobic001G256000 Sobic010G070000--Sobic001G256000 Sobic009G071300--Sobic005G224300 Sobic002G337100 Sobic002G337100 Sobic009G071300--Sobic002G337100 Sobic001G232200 Sobic001G232200 Sobic009G071300--Sobic001G232200 Sobic001G018600 Sobic001G018600 Sobic009G071300--Sobic001G018600 Sobic001G487800 Sobic001G487800 Sobic009G071300--Sobic001G487800 Sobic003G266300 Sobic003G266300 Sobic009G071300--Sobic003G266300 Sobic005G046801 Sobic005G046801 Sobic009G071300--Sobic005G046801 Sobic001G351500 Sobic001G351500 Sobic009G071300--Sobic001G351500 Sobic010G168400 Sobic010G168400 Sobic009G071300--Sobic010G168400 Sobic009G129500 Sobic009G129500 Sobic009G024600--Sobic009G129500 Sobic005G000100 Sobic005G000100 Sobic009G024600--Sobic005G000100 Sobic001G131100 Sobic001G131100 Sobic009G024600--Sobic001G131100 Sobic005G107300 Sobic005G107300 Sobic009G024600--Sobic005G107300 Sobic004G014000 Sobic004G014000 Sobic009G024600--Sobic004G014000 Sobic003G116700 Sobic003G116700 Sobic009G024600--Sobic003G116700 Sobic007G079700 Sobic007G079700 Sobic009G024600--Sobic007G079700 Sobic002G016300 Sobic002G016300 Sobic009G024600--Sobic002G016300 Sobic001G208300 Sobic001G208300 Sobic009G024600--Sobic001G208300 Sobic001G494000 Sobic001G494000 Sobic010G062100--Sobic001G494000 Sobic001G009500 Sobic001G009500 Sobic010G062100--Sobic001G009500 Sobic003G371750 Sobic003G371750 Sobic010G062100--Sobic003G371750 Sobic007G186100 Sobic007G186100 Sobic010G062100--Sobic007G186100 Sobic003G343900 Sobic003G343900 Sobic010G062100--Sobic003G343900 Sobic007G176000 Sobic007G176000 Sobic010G062100--Sobic007G176000 Sobic008G106700 Sobic008G106700 Sobic010G062100--Sobic008G106700 Sobic007G176100 Sobic007G176100 Sobic010G062100--Sobic007G176100 Sobic004G262200 Sobic004G262200 Sobic010G062100--Sobic004G262200 Sobic007G066600 Sobic007G066600 Sobic007G066500--Sobic007G066600 Sobic007G066500--Sobic007G067608 Sobic007G066800 Sobic007G066800 Sobic007G066500--Sobic007G066800 Sobic007G066500--Sobic001G237400 Sobic007G066900 Sobic007G066900 Sobic007G066500--Sobic007G066900 Sobic007G066824 Sobic007G066824 Sobic007G066500--Sobic007G066824 Sobic004G210700 Sobic004G210700 Sobic007G066500--Sobic004G210700 Sobic007G066500--Sobic004G140850 Sobic005G046100 Sobic005G046100 Sobic010G208900--Sobic005G046100 Sobic002G427900 Sobic002G427900 Sobic010G208900--Sobic002G427900 Sobic009G067501 Sobic009G067501 Sobic010G208900--Sobic009G067501 Sobic003G034500 Sobic003G034500 Sobic010G208900--Sobic003G034500 Sobic007G136700 Sobic007G136700 Sobic010G208900--Sobic007G136700 Sobic007G054100 Sobic007G054100 Sobic010G208900--Sobic007G054100 Sobic009G107500 Sobic009G107500 Sobic010G208900--Sobic009G107500 Sobic005G090600 Sobic005G090600 Sobic010G208900--Sobic005G090600 Sobic001G420700 Sobic001G420700 Sobic010G208900--Sobic001G420700 Sobic002G345300 Sobic002G345300 Sobic004G207200--Sobic002G345300 Sobic001G403300 Sobic001G403300 Sobic004G207200--Sobic001G403300 Sobic003G211200 Sobic003G211200 Sobic004G207200--Sobic003G211200 Sobic004G207200--Sobic003G371750 Sobic002G335300 Sobic002G335300 Sobic004G207200--Sobic002G335300 Sobic006G127900 Sobic006G127900 Sobic004G207200--Sobic006G127900 Sobic005G093000 Sobic005G093000 Sobic004G207200--Sobic005G093000 Sobic007G087200 Sobic007G087200 Sobic004G207200--Sobic007G087200 Sobic006G249300 Sobic006G249300 Sobic004G207200--Sobic006G249300
Octagon: transcription factors


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