Gene annotation
Transcriptome id Sobic.010G126600.1
Synonym
Functional annotation expressed protein
UniProt A0A194YIQ8
Pfam PF05078
Panther DB PTHR31621 PTHR31621:SF2
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G18425 : Protein of unknown function (DUF679)
RAP-DB (Rice) LOC_Os01g29240.1 : expressed protein
MaizeGDB (Corn) Zm00025a050556
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G435800 Pheophorbide a oxygenase family protein with Rieske [2Fe-2S] domain(PubMedID : 26465154)@Pheophorbide a oxygenase family protein with Rieske [2Fe-2S] domain(PubMedID : 26465154)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@chlorophyllide a oxygenase, chloroplast precursor, putative, expressed K13600: chlorophyllide a oxygenase
2 Sobic.001G032700 heat shock protein DnaJ, putative, expressed -
3 Sobic.009G030800 expressed protein -
4 Sobic.001G512500 expressed protein -
5 Sobic.006G210400 peptidase, M24 family protein, putative, expressed K01265: methionyl aminopeptidase
6 Sobic.001G283700 acyltransferase, putative, expressed K00630: glycerol-3-phosphate O-acyltransferase
7 Sobic.008G101400 - -
8 Sobic.006G256600 expressed protein -
9 Sobic.001G124800 expressed protein -
10 Sobic.001G309300 expressed protein -
11 Sobic.004G054400 peptidyl-prolyl cis-trans isomerase, FKBP-type, putative, expressed -
12 Sobic.001G003200 RNApolymerase sigma-subunit F(PubMedID : 26465154)@RNA polymerase sigma factor, putative, expressed K03086: RNA polymerase primary sigma factor
13 Sobic.007G204900 extracellular ligand-gated ion channel, putative, expressed -
14 Sobic.009G085500 hydrolase, alpha/beta fold family protein, putative, expressed -
15 Sobic.007G093900 acetyltransferase, GNAT family, putative, expressed -
16 Sobic.007G169300 expressed protein -
17 Sobic.002G102200 acetyltransferase, GNAT family, putative, expressed -
18 Sobic.001G151400 nicotianamine synthase, putative, expressed K05953: nicotianamine synthase
19 Sobic.001G242600 thaumatin family domain containing protein, expressed -
20 Sobic.001G065600 -(PubMedID : 26976818)@hydroxyacid oxidase 1, putative, expressed K11517: (S)-2-hydroxy-acid oxidase


Gene co-expression network
sample Sobic010G126600 Sobic010G126600 Sobic003G435800 Sobic003G435800 Sobic010G126600--Sobic003G435800 Sobic001G032700 Sobic001G032700 Sobic010G126600--Sobic001G032700 Sobic009G030800 Sobic009G030800 Sobic010G126600--Sobic009G030800 Sobic001G512500 Sobic001G512500 Sobic010G126600--Sobic001G512500 Sobic006G210400 Sobic006G210400 Sobic010G126600--Sobic006G210400 Sobic001G283700 Sobic001G283700 Sobic010G126600--Sobic001G283700 Sobic008G101400 Sobic008G101400 Sobic010G126600--Sobic008G101400 Sobic006G256600 Sobic006G256600 Sobic010G126600--Sobic006G256600 Sobic001G124800 Sobic001G124800 Sobic010G126600--Sobic001G124800 Sobic007G207800 Sobic007G207800 Sobic003G435800--Sobic007G207800 Sobic003G387800 Sobic003G387800 Sobic003G435800--Sobic003G387800 Sobic007G223500 Sobic007G223500 Sobic003G435800--Sobic007G223500 Sobic002G030500 Sobic002G030500 Sobic003G435800--Sobic002G030500 Sobic008G134800 Sobic008G134800 Sobic003G435800--Sobic008G134800 Sobic001G425400 Sobic001G425400 Sobic003G435800--Sobic001G425400 Sobic004G175500 Sobic004G175500 Sobic003G435800--Sobic004G175500 Sobic002G316700 Sobic002G316700 Sobic003G435800--Sobic002G316700 Sobic004G249800 Sobic004G249800 Sobic003G435800--Sobic004G249800 Sobic004G054400 Sobic004G054400 Sobic001G032700--Sobic004G054400 Sobic001G032700--Sobic001G512500 Sobic001G327800 Sobic001G327800 Sobic001G032700--Sobic001G327800 Sobic005G014700 Sobic005G014700 Sobic001G032700--Sobic005G014700 Sobic004G163800 Sobic004G163800 Sobic001G032700--Sobic004G163800 Sobic003G343400 Sobic003G343400 Sobic001G032700--Sobic003G343400 Sobic001G309300 Sobic001G309300 Sobic001G032700--Sobic001G309300 Sobic001G308200 Sobic001G308200 Sobic001G032700--Sobic001G308200 Sobic002G231200 Sobic002G231200 Sobic001G032700--Sobic002G231200 Sobic009G030800--Sobic001G283700 Sobic004G012900 Sobic004G012900 Sobic009G030800--Sobic004G012900 Sobic009G059300 Sobic009G059300 Sobic009G030800--Sobic009G059300 Sobic009G140600 Sobic009G140600 Sobic009G030800--Sobic009G140600 Sobic003G387100 Sobic003G387100 Sobic009G030800--Sobic003G387100 Sobic005G149400 Sobic005G149400 Sobic009G030800--Sobic005G149400 Sobic004G307400 Sobic004G307400 Sobic009G030800--Sobic004G307400 Sobic009G175500 Sobic009G175500 Sobic009G030800--Sobic009G175500 Sobic001G134700 Sobic001G134700 Sobic009G030800--Sobic001G134700 Sobic001G512500--Sobic004G054400 Sobic001G512500--Sobic001G032700 Sobic001G512500--Sobic001G124800 Sobic003G014300 Sobic003G014300 Sobic001G512500--Sobic003G014300 Sobic004G298900 Sobic004G298900 Sobic001G512500--Sobic004G298900 Sobic003G343500 Sobic003G343500 Sobic001G512500--Sobic003G343500 Sobic010G058200 Sobic010G058200 Sobic001G512500--Sobic010G058200 Sobic004G026500 Sobic004G026500 Sobic001G512500--Sobic004G026500 Sobic003G037300 Sobic003G037300 Sobic001G512500--Sobic003G037300 Sobic006G010900 Sobic006G010900 Sobic006G210400--Sobic006G010900 Sobic007G085800 Sobic007G085800 Sobic006G210400--Sobic007G085800 Sobic006G210400--Sobic006G256600 Sobic003G141100 Sobic003G141100 Sobic006G210400--Sobic003G141100 Sobic002G297400 Sobic002G297400 Sobic006G210400--Sobic002G297400 Sobic006G210400--Sobic003G387100 Sobic006G210400--Sobic001G309300 Sobic010G255100 Sobic010G255100 Sobic006G210400--Sobic010G255100 Sobic006G210400--Sobic001G124800 Sobic006G106400 Sobic006G106400 Sobic001G283700--Sobic006G106400 Sobic001G283700--Sobic009G175500 Sobic001G126300 Sobic001G126300 Sobic001G283700--Sobic001G126300 Sobic004G333400 Sobic004G333400 Sobic001G283700--Sobic004G333400 Sobic001G283700--Sobic004G012900 Sobic001G128600 Sobic001G128600 Sobic001G283700--Sobic001G128600 Sobic004G165000 Sobic004G165000 Sobic001G283700--Sobic004G165000 Sobic002G112400 Sobic002G112400 Sobic001G283700--Sobic002G112400 Sobic005G110400 Sobic005G110400 Sobic001G283700--Sobic005G110400 Sobic008G015100 Sobic008G015100 Sobic008G101400--Sobic008G015100 Sobic004G201700 Sobic004G201700 Sobic008G101400--Sobic004G201700 Sobic010G189300 Sobic010G189300 Sobic008G101400--Sobic010G189300 Sobic008G101400--Sobic002G316700 Sobic009G062500 Sobic009G062500 Sobic008G101400--Sobic009G062500 Sobic009G164300 Sobic009G164300 Sobic008G101400--Sobic009G164300 Sobic007G136900 Sobic007G136900 Sobic008G101400--Sobic007G136900 Sobic008G101400--Sobic007G223500 Sobic001G435500 Sobic001G435500 Sobic008G101400--Sobic001G435500 Sobic006G256600--Sobic010G255100 Sobic003G085000 Sobic003G085000 Sobic006G256600--Sobic003G085000 Sobic001G291900 Sobic001G291900 Sobic006G256600--Sobic001G291900 Sobic006G256600--Sobic006G210400 Sobic006G256600--Sobic002G297400 Sobic006G055800 Sobic006G055800 Sobic006G256600--Sobic006G055800 Sobic005G002900 Sobic005G002900 Sobic006G256600--Sobic005G002900 Sobic006G256600--Sobic001G309300 Sobic004G065300 Sobic004G065300 Sobic006G256600--Sobic004G065300 Sobic001G124800--Sobic003G387100 Sobic002G102200 Sobic002G102200 Sobic001G124800--Sobic002G102200 Sobic006G101500 Sobic006G101500 Sobic001G124800--Sobic006G101500 Sobic001G124800--Sobic004G054400 Sobic003G160800 Sobic003G160800 Sobic001G124800--Sobic003G160800 Sobic001G124800--Sobic001G309300 Sobic001G124800--Sobic002G112400 Sobic001G124800--Sobic010G058200 Sobic004G336200 Sobic004G336200 Sobic001G124800--Sobic004G336200
Octagon: transcription factors


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