Gene annotation
Transcriptome id Sobic.010G146000.1
Synonym CSLD1, ATCSLD1, Sb10g019350
Functional annotation CSLD5 - cellulose synthase-like family D, expressed
UniProt C5Z346
Pfam PF03552
Panther DB PTHR13301 PTHR13301:SF40
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0016760; cellulose synthase (UDP-forming) activity GO:0016020membrane


Orthologs (automatic annotation)
TAIR AT2G33100 : cellulose synthase-like D1
RAP-DB (Rice) LOC_Os06g22980.1 : CSLD5 - cellulose synthase-like family D, expressed
MaizeGDB (Corn) Zm00025a006226 , Zm00025a050769 , Zm00025a054306 , Zm00025a050280
Brachypodium KQK02740 , KQJ86377 , KQJ96300
Barley HORVU0Hr1G011610.1 , HORVU0Hr1G011610.2 , HORVU7Hr1G081850.1 , HORVU7Hr1G081850.3 , HORVU7Hr1G081850.2 , HORVU7Hr1G081850.5 , HORVU7Hr1G081850.4 , HORVU7Hr1G081850.7 , HORVU7Hr1G081850.6 , HORVU2Hr1G021450.2 , HORVU2Hr1G021450.3 , HORVU2Hr1G021450.1 , HORVU2Hr1G021450.6 , HORVU2Hr1G021450.4 , HORVU2Hr1G021450.5 , HORVU5Hr1G023640.5 , HORVU5Hr1G023640.6 , HORVU5Hr1G023640.2 , HORVU5Hr1G023640.3 , HORVU5Hr1G023640.8 , HORVU5Hr1G023640.9 , HORVU5Hr1G023640.7 , HORVU5Hr1G023640.4 , HORVU5Hr1G023640.1
Wheat TraesCS2D02G126100 , TraesCS5D02G102600 , TraesCS7D02G339800 , TraesCS7A02G298600 , TraesCS7A02G033100 , TraesCS7A02G331500 , TraesCS5A02G090500 , TraesCS2A02G122600 , TraesCS7B02G243200 , TraesCS2B02G144900 , TraesCS5B02G096200 , TraesCS7D02G294300
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G011900 - -
2 Sobic.008G100600 pattern formation protein EMB30, putative, expressed K18443: golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1
3 Sobic.008G100300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pumilio-family RNA binding repeat domain containing protein, expressed -
4 Sobic.003G213000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./middle senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@Sugar transporter(PubMedID : 27330561)@Sugar transporter(PubMedID : 27330561)@nodulin MtN3 family protein, putative, expressed K15382: SLC50A, solute carrier family 50 (sugar transporter)
5 Sobic.001G405100 BTBT1 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with tetratricopeptide repeats, expressed -
6 Sobic.005G110424 - -
7 Sobic.004G082800 GRAM and C2 domains containing protein, putative, expressed -
8 Sobic.010G202200 - -
9 Sobic.008G036600 expressed protein -
10 Sobic.008G017850 - -
11 Sobic.007G082200 white-brown complex homolog protein 11, putative, expressed -
12 Sobic.006G117700 - -
13 Sobic.010G024400 expressed protein -
14 Sobic.010G134650 - -
15 Sobic.003G156900 expressed protein -
16 Sobic.001G024400 pectinesterase inhibitor domain containing protein, expressed -
17 Sobic.010G130601 - -
18 Sobic.004G138750 - -
19 Sobic.003G236000 CGMC_MAPKCMGC_2.5 - CGMC includes CDA, MAPK, GSK3, and CLKC kinases, expressed K04371: ERK, mitogen-activated protein kinase 1/3
20 Sobic.001G444900 STRUBBELIG-RECEPTOR FAMILY 7("PubMedID : 26759170,PubMedID : 24597475")@STRUBBELIG-RECEPTOR FAMILY 7 precursor, putative, expressed -


Gene co-expression network
sample Sobic010G146000 Sobic010G146000 Sobic004G011900 Sobic004G011900 Sobic010G146000--Sobic004G011900 Sobic008G100600 Sobic008G100600 Sobic010G146000--Sobic008G100600 Sobic008G100300 Sobic008G100300 Sobic010G146000--Sobic008G100300 Sobic003G213000 Sobic003G213000 Sobic010G146000--Sobic003G213000 Sobic001G405100 Sobic001G405100 Sobic010G146000--Sobic001G405100 Sobic005G110424 Sobic005G110424 Sobic010G146000--Sobic005G110424 Sobic004G082800 Sobic004G082800 Sobic010G146000--Sobic004G082800 Sobic010G202200 Sobic010G202200 Sobic010G146000--Sobic010G202200 Sobic008G036600 Sobic008G036600 Sobic010G146000--Sobic008G036600 Sobic004G011900--Sobic010G146000 Sobic004G011900--Sobic008G100600 Sobic004G011900--Sobic008G100300 Sobic004G011900--Sobic003G213000 Sobic004G011900--Sobic004G082800 Sobic004G011900--Sobic008G036600 Sobic007G082200 Sobic007G082200 Sobic004G011900--Sobic007G082200 Sobic004G011900--Sobic005G110424 Sobic004G011900--Sobic001G405100 Sobic008G100600--Sobic005G110424 Sobic008G100600--Sobic010G202200 Sobic008G100600--Sobic010G146000 Sobic001G024400 Sobic001G024400 Sobic008G100600--Sobic001G024400 Sobic008G100600--Sobic001G405100 Sobic003G156900 Sobic003G156900 Sobic008G100600--Sobic003G156900 Sobic010G024400 Sobic010G024400 Sobic008G100600--Sobic010G024400 Sobic004G025900 Sobic004G025900 Sobic008G100600--Sobic004G025900 Sobic008G017850 Sobic008G017850 Sobic008G100600--Sobic008G017850 Sobic008G100300--Sobic010G146000 Sobic004G189000 Sobic004G189000 Sobic008G100300--Sobic004G189000 Sobic008G100300--Sobic003G213000 Sobic010G277700 Sobic010G277700 Sobic008G100300--Sobic010G277700 Sobic008G100300--Sobic004G011900 Sobic008G100300--Sobic007G082200 Sobic010G134650 Sobic010G134650 Sobic008G100300--Sobic010G134650 Sobic006G117700 Sobic006G117700 Sobic008G100300--Sobic006G117700 Sobic008G100300--Sobic008G100600 Sobic008G155500 Sobic008G155500 Sobic003G213000--Sobic008G155500 Sobic003G213000--Sobic010G202200 Sobic002G382300 Sobic002G382300 Sobic003G213000--Sobic002G382300 Sobic001G519600 Sobic001G519600 Sobic003G213000--Sobic001G519600 Sobic009G230800 Sobic009G230800 Sobic003G213000--Sobic009G230800 Sobic003G213000--Sobic010G024400 Sobic003G213000--Sobic005G110424 Sobic003G213000--Sobic008G100600 Sobic003G213000--Sobic006G117700 Sobic001G405100--Sobic003G156900 Sobic005G110559 Sobic005G110559 Sobic001G405100--Sobic005G110559 Sobic007G226700 Sobic007G226700 Sobic001G405100--Sobic007G226700 Sobic010G274100 Sobic010G274100 Sobic001G405100--Sobic010G274100 Sobic002G323000 Sobic002G323000 Sobic001G405100--Sobic002G323000 Sobic008G075800 Sobic008G075800 Sobic001G405100--Sobic008G075800 Sobic007G061800 Sobic007G061800 Sobic001G405100--Sobic007G061800 Sobic001G364700 Sobic001G364700 Sobic001G405100--Sobic001G364700 Sobic010G118800 Sobic010G118800 Sobic001G405100--Sobic010G118800 Sobic005G110424--Sobic003G156900 Sobic005G185900 Sobic005G185900 Sobic005G110424--Sobic005G185900 Sobic008G148600 Sobic008G148600 Sobic005G110424--Sobic008G148600 Sobic009G061500 Sobic009G061500 Sobic005G110424--Sobic009G061500 Sobic006G027601 Sobic006G027601 Sobic005G110424--Sobic006G027601 Sobic005G054401 Sobic005G054401 Sobic005G110424--Sobic005G054401 Sobic003G175000 Sobic003G175000 Sobic005G110424--Sobic003G175000 Sobic008G136601 Sobic008G136601 Sobic005G110424--Sobic008G136601 Sobic001G094700 Sobic001G094700 Sobic005G110424--Sobic001G094700 Sobic004G082800--Sobic006G117700 Sobic004G082800--Sobic010G024400 Sobic004G082800--Sobic010G202200 Sobic010G130601 Sobic010G130601 Sobic004G082800--Sobic010G130601 Sobic004G082800--Sobic005G110424 Sobic004G082800--Sobic009G230800 Sobic004G082800--Sobic001G024400 Sobic004G064200 Sobic004G064200 Sobic004G082800--Sobic004G064200 Sobic004G082800--Sobic001G519600 Sobic010G202200--Sobic009G230800 Sobic006G269101 Sobic006G269101 Sobic010G202200--Sobic006G269101 Sobic010G202200--Sobic008G148600 Sobic010G202200--Sobic008G136601 Sobic001G340800 Sobic001G340800 Sobic010G202200--Sobic001G340800 Sobic010G202200--Sobic006G027601 Sobic010G202200--Sobic005G110424 Sobic010G202200--Sobic003G156900 Sobic008G097966 Sobic008G097966 Sobic010G202200--Sobic008G097966 Sobic008G036600--Sobic010G202200 Sobic003G236000 Sobic003G236000 Sobic008G036600--Sobic003G236000 Sobic008G036600--Sobic001G024400 Sobic008G036600--Sobic010G024400 Sobic005G225500 Sobic005G225500 Sobic008G036600--Sobic005G225500 Sobic008G036600--Sobic005G110424 Sobic007G039200 Sobic007G039200 Sobic008G036600--Sobic007G039200 Sobic005G185500 Sobic005G185500 Sobic008G036600--Sobic005G185500 Sobic008G036600--Sobic009G230800
Octagon: transcription factors


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