Gene annotation
Transcriptome id Sobic.010G186300.1
Synonym SOS2, CBL-interacting protein kinases, CIPK24, SbCIPK24, ATSOS2, Sb10g023680, SNRK3.11
Functional annotation Interacting factor of CBLs (PubMedID : 19860013)
CAMK_KIN1/SNF1/Nim1_like.27 - CAMK includes calcium/calmodulin depedent protein kinases, expressed
UniProt A0A1P8NLT7 , C4P7U7
Pfam PF14531 PF03822
Panther DB PTHR24343 PTHR24343:SF157
NCBI CDD KOG0583; Serine/threonine protein kinase
KEGG Orthology -
Gene Ontology GO:0007165; signal transduction


Orthologs (automatic annotation)
TAIR AT5G35410 : Protein kinase superfamily protein
RAP-DB (Rice) LOC_Os06g40370.1 : CAMK_KIN1/SNF1/Nim1_like.27 - CAMK includes calcium/calmodulin depedent protein kinases, expressed
MaizeGDB (Corn) Zm00025a051316 , Zm00025a042219
Brachypodium KQK21052 , KQK17749 , PNT75674 , PNT75671 , PNT75673 , PNT75672
Barley HORVU7Hr1G090260.8 , HORVU7Hr1G090260.9 , HORVU7Hr1G090260.6 , HORVU7Hr1G090260.7 , HORVU7Hr1G090260.12 , HORVU7Hr1G090260.13 , HORVU7Hr1G090260.10 , HORVU7Hr1G090260.11 , HORVU7Hr1G090260.16 , HORVU7Hr1G090260.17 , HORVU7Hr1G090260.14 , HORVU7Hr1G090260.15 , HORVU7Hr1G090260.18 , HORVU7Hr1G090260.1 , HORVU7Hr1G090260.2 , HORVU7Hr1G090260.5
Wheat TraesCS7D02G374400 , TraesCS7D02G374400 , TraesCS7B02G279300 , TraesCS7A02G377600
Populus PNT56018 , PNT56016 , PNT56017 , PNT56014 , PNT56015 , PNT56012 , PNT56013 , PNT56010 , PNT56011 , PNT56007 , PNT56006 , PNT56009 , PNT56008 , PNT19116 , PNT19117 , PNT19115


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G234500 eukaryotic aspartyl protease domain containing protein, expressed -
2 Sobic.002G375900 glycerophosphoryl diester phosphodiesterase family protein, putative, expressed -
3 Sobic.001G059900 type I inositol-1,4,5-trisphosphate 5-phosphatase, putative, expressed -
4 Sobic.009G127800 BZIP protein, putative, expressed -
5 Sobic.003G292700 kinesin motor protein-related, putative, expressed K10406: kinesin family member C2/C3
6 Sobic.006G275500 regulator of chromosome condensation, putative, expressed -
7 Sobic.001G425700 BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative, expressed -
8 Sobic.003G420300 zinc finger protein, putative, expressed -
9 Sobic.001G379500 expressed protein -
10 Sobic.009G202801 - K10406: kinesin family member C2/C3
11 Sobic.005G034100 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@powdery mildew resistant protein 5, putative, expressed -
12 Sobic.008G052300 plant protein of unknown function DUF869 domain containing protein, expressed -
13 Sobic.006G197400 helix-loop-helix DNA-binding protein, putative, expressed -
14 Sobic.009G225500 serine/threonine protein phosphatase 2A 59 kDa regulatory subunit Bgamma isoform, putative, expressed K11584: serine/threonine-protein phosphatase 2A regulatory subunit B'
15 Sobic.003G143900 kelch motif family protein, putative, expressed -
16 Sobic.007G188001 - K11844: ubiquitin carboxyl-terminal hydrolase 16/45
17 Sobic.003G259300 serine/threonine protein phosphatase 2A 59 kDa regulatory subunit Bgamma isoform, putative, expressed K11584: serine/threonine-protein phosphatase 2A regulatory subunit B'
18 Sobic.006G016700 RNA-dependent RNA polymerase, putative, expressed K11699: RDR, RNA-dependent RNA polymerase
19 Sobic.003G251700 "domain confirmed by Pfam database, expression supported by NCBI EST database, expressed in leaf and root"(PubMedID : 20499123)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@auxin response factor, putative, expressed K14486: K14486, auxin response factor
20 Sobic.003G370300 GPI transamidase subunit PIG-U domain containing protein, expressed K10879: DNA-repair protein XRCC2


Gene co-expression network
sample Sobic010G186300 Sobic010G186300 Sobic004G234500 Sobic004G234500 Sobic010G186300--Sobic004G234500 Sobic002G375900 Sobic002G375900 Sobic010G186300--Sobic002G375900 Sobic001G059900 Sobic001G059900 Sobic010G186300--Sobic001G059900 Sobic009G127800 Sobic009G127800 Sobic010G186300--Sobic009G127800 Sobic003G292700 Sobic003G292700 Sobic010G186300--Sobic003G292700 Sobic006G275500 Sobic006G275500 Sobic010G186300--Sobic006G275500 Sobic001G425700 Sobic001G425700 Sobic010G186300--Sobic001G425700 Sobic003G420300 Sobic003G420300 Sobic010G186300--Sobic003G420300 Sobic001G379500 Sobic001G379500 Sobic010G186300--Sobic001G379500 Sobic010G023400 Sobic010G023400 Sobic004G234500--Sobic010G023400 Sobic006G142500 Sobic006G142500 Sobic004G234500--Sobic006G142500 Sobic010G086000 Sobic010G086000 Sobic004G234500--Sobic010G086000 Sobic004G246500 Sobic004G246500 Sobic004G234500--Sobic004G246500 Sobic004G267600 Sobic004G267600 Sobic004G234500--Sobic004G267600 Sobic004G234500--Sobic009G127800 Sobic006G274200 Sobic006G274200 Sobic004G234500--Sobic006G274200 Sobic002G027600 Sobic002G027600 Sobic004G234500--Sobic002G027600 Sobic002G317700 Sobic002G317700 Sobic004G234500--Sobic002G317700 Sobic006G135800 Sobic006G135800 Sobic002G375900--Sobic006G135800 Sobic008G052300 Sobic008G052300 Sobic002G375900--Sobic008G052300 Sobic002G054400 Sobic002G054400 Sobic002G375900--Sobic002G054400 Sobic003G251700 Sobic003G251700 Sobic002G375900--Sobic003G251700 Sobic004G269100 Sobic004G269100 Sobic002G375900--Sobic004G269100 Sobic005G045700 Sobic005G045700 Sobic002G375900--Sobic005G045700 Sobic002G366300 Sobic002G366300 Sobic002G375900--Sobic002G366300 Sobic007G192200 Sobic007G192200 Sobic002G375900--Sobic007G192200 Sobic006G226000 Sobic006G226000 Sobic002G375900--Sobic006G226000 Sobic001G059900--Sobic001G379500 Sobic009G101100 Sobic009G101100 Sobic001G059900--Sobic009G101100 Sobic003G273800 Sobic003G273800 Sobic001G059900--Sobic003G273800 Sobic001G059900--Sobic009G127800 Sobic003G041700 Sobic003G041700 Sobic001G059900--Sobic003G041700 Sobic005G210600 Sobic005G210600 Sobic001G059900--Sobic005G210600 Sobic005G188400 Sobic005G188400 Sobic001G059900--Sobic005G188400 Sobic002G237700 Sobic002G237700 Sobic001G059900--Sobic002G237700 Sobic001G059900--Sobic004G234500 Sobic006G221300 Sobic006G221300 Sobic009G127800--Sobic006G221300 Sobic009G225500 Sobic009G225500 Sobic009G127800--Sobic009G225500 Sobic001G054700 Sobic001G054700 Sobic009G127800--Sobic001G054700 Sobic009G127800--Sobic006G142500 Sobic009G127800--Sobic008G052300 Sobic002G279400 Sobic002G279400 Sobic009G127800--Sobic002G279400 Sobic007G162400 Sobic007G162400 Sobic009G127800--Sobic007G162400 Sobic009G127800--Sobic002G027600 Sobic005G157300 Sobic005G157300 Sobic009G127800--Sobic005G157300 Sobic003G292700--Sobic003G420300 Sobic003G226700 Sobic003G226700 Sobic003G292700--Sobic003G226700 Sobic009G202801 Sobic009G202801 Sobic003G292700--Sobic009G202801 Sobic003G292700--Sobic001G054700 Sobic003G292700--Sobic006G142500 Sobic003G032200 Sobic003G032200 Sobic003G292700--Sobic003G032200 Sobic001G377700 Sobic001G377700 Sobic003G292700--Sobic001G377700 Sobic002G021200 Sobic002G021200 Sobic003G292700--Sobic002G021200 Sobic008G083500 Sobic008G083500 Sobic003G292700--Sobic008G083500 Sobic006G016700 Sobic006G016700 Sobic006G275500--Sobic006G016700 Sobic001G104500 Sobic001G104500 Sobic006G275500--Sobic001G104500 Sobic002G168000 Sobic002G168000 Sobic006G275500--Sobic002G168000 Sobic003G147500 Sobic003G147500 Sobic006G275500--Sobic003G147500 Sobic007G187700 Sobic007G187700 Sobic006G275500--Sobic007G187700 Sobic008G090000 Sobic008G090000 Sobic006G275500--Sobic008G090000 Sobic009G077300 Sobic009G077300 Sobic006G275500--Sobic009G077300 Sobic006G094100 Sobic006G094100 Sobic006G275500--Sobic006G094100 Sobic009G146250 Sobic009G146250 Sobic006G275500--Sobic009G146250 Sobic003G259300 Sobic003G259300 Sobic001G425700--Sobic003G259300 Sobic001G425700--Sobic003G226700 Sobic002G006100 Sobic002G006100 Sobic001G425700--Sobic002G006100 Sobic003G024000 Sobic003G024000 Sobic001G425700--Sobic003G024000 Sobic003G104100 Sobic003G104100 Sobic001G425700--Sobic003G104100 Sobic004G164700 Sobic004G164700 Sobic001G425700--Sobic004G164700 Sobic001G425700--Sobic009G225500 Sobic006G281900 Sobic006G281900 Sobic001G425700--Sobic006G281900 Sobic001G425700--Sobic009G127800 Sobic003G420300--Sobic003G292700 Sobic003G420300--Sobic003G226700 Sobic003G420300--Sobic008G083500 Sobic010G067600 Sobic010G067600 Sobic003G420300--Sobic010G067600 Sobic003G289800 Sobic003G289800 Sobic003G420300--Sobic003G289800 Sobic004G315700 Sobic004G315700 Sobic003G420300--Sobic004G315700 Sobic002G320600 Sobic002G320600 Sobic003G420300--Sobic002G320600 Sobic007G084200 Sobic007G084200 Sobic003G420300--Sobic007G084200 Sobic009G052100 Sobic009G052100 Sobic003G420300--Sobic009G052100 Sobic001G379500--Sobic001G059900 Sobic001G379500--Sobic009G101100 Sobic001G379500--Sobic005G210600 Sobic001G379500--Sobic009G127800 Sobic002G296000 Sobic002G296000 Sobic001G379500--Sobic002G296000 Sobic001G379500--Sobic006G221300 Sobic001G304800 Sobic001G304800 Sobic001G379500--Sobic001G304800 Sobic002G286700 Sobic002G286700 Sobic001G379500--Sobic002G286700 Sobic006G105600 Sobic006G105600 Sobic001G379500--Sobic006G105600
Octagon: transcription factors


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