Gene annotation
Transcriptome id Sobic.010G187201.1
Synonym -
Functional annotation -
UniProt A0A1W0VTT1
Pfam PF00005 PF01061
Panther DB PTHR19241 PTHR19241:SF155
NCBI CDD KOG0061; Transporter, ABC superfamily (Breast cancer resistance protein)
KEGG Orthology -
Gene Ontology GO:0016887; ATPase activity GO:0005524ATP binding GO:0016020membrane


Orthologs (automatic annotation)
TAIR AT3G13220 : ABC-2 type transporter family protein
RAP-DB (Rice) LOC_Os06g40550.1 : ABC-2 type transporter domain containing protein, expressed
MaizeGDB (Corn) Zm00025a051330
Brachypodium KQK17734
Barley HORVU7Hr1G090350.4 , HORVU7Hr1G090350.5 , HORVU7Hr1G090350.6 , HORVU7Hr1G090350.7 , HORVU7Hr1G090350.1 , HORVU7Hr1G090350.2 , HORVU7Hr1G090350.3
Wheat TraesCS7D02G375300 , TraesCS7D02G375300 , TraesCS7B02G280300 , TraesCS7B02G280300 , TraesCS7B02G280300 , TraesCS7A02G378500 , TraesCS7A02G378500 , TraesCS7A02G378500
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G073700 OsMADS65 - MADS-box family gene with MIKC , type-box, expressed -
2 Sobic.001G535300 - -
3 Sobic.006G281600 OsSigP6 - Putative Type I Signal Peptidase homologue@ employs a putative Ser/Lys catalytic dyad, expressed K03100: signal peptidase I
4 Sobic.007G022400 "domain confirmed by Pfam database, expression not supported"(PubMedID : 20499123)@OsSAUR31 - Auxin-responsive SAUR gene family member, expressed K14488: SAUR family protein
5 Sobic.008G130601 - -
6 Sobic.002G252600 pob, putative, expressed -
7 Sobic.003G167800 DUF630/DUF632 domains containing protein, putative, expressed -
8 Sobic.002G108800 auxin efflux carrier component, putative, expressed -
9 Sobic.007G156500 alpha-amylase precursor, putative, expressed K01176: AMY, amyA, alpha-amylase
10 Sobic.002G128750 - -
11 Sobic.003G244800 - -
12 Sobic.001G243901 - -
13 Sobic.001G345333 - -
14 Sobic.002G253500 FAD dependent oxidoreductase domain containing protein, expressed K00306: sarcosine oxidase / L-pipecolate oxidase
15 Sobic.010G248200 KID-containing protein, putative, expressed -
16 Sobic.002G007250 - -
17 Sobic.010G218500 bZIP transcription factor domain containing protein, expressed -
18 Sobic.005G117901 - -
19 Sobic.006G116300 OsFBDUF22 - F-box and DUF domain containing protein, expressed -
20 Sobic.008G061500 receptor kinase, putative, expressed -


Gene co-expression network
sample Sobic010G187201 Sobic010G187201 Sobic003G073700 Sobic003G073700 Sobic010G187201--Sobic003G073700 Sobic001G535300 Sobic001G535300 Sobic010G187201--Sobic001G535300 Sobic006G281600 Sobic006G281600 Sobic010G187201--Sobic006G281600 Sobic007G022400 Sobic007G022400 Sobic010G187201--Sobic007G022400 Sobic008G130601 Sobic008G130601 Sobic010G187201--Sobic008G130601 Sobic002G252600 Sobic002G252600 Sobic010G187201--Sobic002G252600 Sobic003G167800 Sobic003G167800 Sobic010G187201--Sobic003G167800 Sobic002G108800 Sobic002G108800 Sobic010G187201--Sobic002G108800 Sobic007G156500 Sobic007G156500 Sobic010G187201--Sobic007G156500 Sobic003G073700--Sobic010G187201 Sobic003G073700--Sobic001G535300 Sobic003G073700--Sobic006G281600 Sobic003G073700--Sobic007G022400 Sobic003G073700--Sobic003G167800 Sobic001G116200 Sobic001G116200 Sobic003G073700--Sobic001G116200 Sobic003G244800 Sobic003G244800 Sobic003G073700--Sobic003G244800 Sobic002G128750 Sobic002G128750 Sobic003G073700--Sobic002G128750 Sobic001G252200 Sobic001G252200 Sobic003G073700--Sobic001G252200 Sobic001G535300--Sobic002G128750 Sobic001G535300--Sobic007G022400 Sobic009G063450 Sobic009G063450 Sobic001G535300--Sobic009G063450 Sobic001G535300--Sobic003G073700 Sobic006G045200 Sobic006G045200 Sobic001G535300--Sobic006G045200 Sobic001G535300--Sobic010G187201 Sobic001G177500 Sobic001G177500 Sobic001G535300--Sobic001G177500 Sobic002G013500 Sobic002G013500 Sobic001G535300--Sobic002G013500 Sobic002G085700 Sobic002G085700 Sobic001G535300--Sobic002G085700 Sobic006G281600--Sobic003G073700 Sobic006G281600--Sobic010G187201 Sobic003G044900 Sobic003G044900 Sobic006G281600--Sobic003G044900 Sobic001G024200 Sobic001G024200 Sobic006G281600--Sobic001G024200 Sobic002G221700 Sobic002G221700 Sobic006G281600--Sobic002G221700 Sobic006G116300 Sobic006G116300 Sobic006G281600--Sobic006G116300 Sobic003G117000 Sobic003G117000 Sobic006G281600--Sobic003G117000 Sobic006G133600 Sobic006G133600 Sobic006G281600--Sobic006G133600 SobicK009900 SobicK009900 Sobic006G281600--SobicK009900 Sobic007G022400--Sobic001G535300 Sobic007G022400--Sobic002G128750 Sobic007G022400--Sobic006G045200 Sobic008G038700 Sobic008G038700 Sobic007G022400--Sobic008G038700 Sobic007G022400--Sobic003G073700 Sobic007G022400--Sobic009G063450 Sobic005G031800 Sobic005G031800 Sobic007G022400--Sobic005G031800 Sobic005G108300 Sobic005G108300 Sobic007G022400--Sobic005G108300 Sobic006G062200 Sobic006G062200 Sobic007G022400--Sobic006G062200 Sobic005G050900 Sobic005G050900 Sobic008G130601--Sobic005G050900 Sobic001G370100 Sobic001G370100 Sobic008G130601--Sobic001G370100 Sobic001G489225 Sobic001G489225 Sobic008G130601--Sobic001G489225 Sobic001G158966 Sobic001G158966 Sobic008G130601--Sobic001G158966 Sobic009G125700 Sobic009G125700 Sobic008G130601--Sobic009G125700 Sobic008G130601--Sobic001G177500 Sobic008G045100 Sobic008G045100 Sobic008G130601--Sobic008G045100 Sobic001G200400 Sobic001G200400 Sobic008G130601--Sobic001G200400 Sobic003G190701 Sobic003G190701 Sobic008G130601--Sobic003G190701 Sobic004G133301 Sobic004G133301 Sobic002G252600--Sobic004G133301 Sobic001G393600 Sobic001G393600 Sobic002G252600--Sobic001G393600 Sobic001G521900 Sobic001G521900 Sobic002G252600--Sobic001G521900 Sobic002G252600--Sobic001G370100 Sobic004G159600 Sobic004G159600 Sobic002G252600--Sobic004G159600 Sobic002G252600--Sobic001G177500 Sobic004G327100 Sobic004G327100 Sobic002G252600--Sobic004G327100 Sobic008G097000 Sobic008G097000 Sobic002G252600--Sobic008G097000 Sobic002G156700 Sobic002G156700 Sobic002G252600--Sobic002G156700 Sobic003G167632 Sobic003G167632 Sobic003G167800--Sobic003G167632 Sobic003G057800 Sobic003G057800 Sobic003G167800--Sobic003G057800 Sobic001G479500 Sobic001G479500 Sobic003G167800--Sobic001G479500 Sobic002G376800 Sobic002G376800 Sobic003G167800--Sobic002G376800 Sobic007G073400 Sobic007G073400 Sobic003G167800--Sobic007G073400 Sobic010G248200 Sobic010G248200 Sobic003G167800--Sobic010G248200 Sobic008G161401 Sobic008G161401 Sobic003G167800--Sobic008G161401 Sobic009G110366 Sobic009G110366 Sobic003G167800--Sobic009G110366 Sobic001G046600 Sobic001G046600 Sobic003G167800--Sobic001G046600 Sobic002G108800--Sobic007G156500 Sobic002G007250 Sobic002G007250 Sobic002G108800--Sobic002G007250 Sobic001G345333 Sobic001G345333 Sobic002G108800--Sobic001G345333 Sobic002G253500 Sobic002G253500 Sobic002G108800--Sobic002G253500 Sobic002G108800--Sobic010G248200 Sobic004G212800 Sobic004G212800 Sobic002G108800--Sobic004G212800 Sobic002G039500 Sobic002G039500 Sobic002G108800--Sobic002G039500 Sobic007G023700 Sobic007G023700 Sobic002G108800--Sobic007G023700 Sobic002G108800--Sobic007G073400 Sobic007G156500--Sobic002G108800 Sobic007G156500--Sobic002G253500 Sobic009G231300 Sobic009G231300 Sobic007G156500--Sobic009G231300 Sobic007G156500--Sobic002G007250 Sobic007G156500--Sobic010G248200 Sobic007G156500--Sobic002G039500 Sobic007G156500--Sobic001G345333 Sobic007G156500--Sobic007G023700 Sobic007G156500--Sobic008G161401
Octagon: transcription factors


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