Gene annotation
Transcriptome id Sobic.007G022400.1
Synonym Sb07g001970, SbSAUR54, small auxin up RNA
Functional annotation "domain confirmed by Pfam database, expression not supported" (PubMedID : 20499123)
OsSAUR31 - Auxin-responsive SAUR gene family member, expressed
UniProt C5YMG9
Pfam PF02519
Panther DB PTHR31374 PTHR31374:SF54
NCBI CDD -
KEGG Orthology K14488; SAUR family protein
Gene Ontology GO:0009733; response to auxin


Orthologs (automatic annotation)
TAIR AT2G21210 : SAUR-like auxin-responsive protein family
RAP-DB (Rice) LOC_Os08g02520.1 : OsSAUR31 - Auxin-responsive SAUR gene family member, expressed
MaizeGDB (Corn) Zm00025a030231
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G535300 - -
2 Sobic.002G128750 - -
3 Sobic.006G045200 - -
4 Sobic.008G038700 DnaK family protein, putative, expressed K09490: HSPA5, endoplasmic reticulum chaperone BiP
5 Sobic.003G073700 OsMADS65 - MADS-box family gene with MIKC , type-box, expressed -
6 Sobic.009G063450 - -
7 Sobic.005G031800 - -
8 Sobic.005G108300 "domain confirmed by Pfam database, expression supported by NCBI EST database, expression induced by BR treatment"(PubMedID : 20499123)@OsGH3.3 - Probable indole-3-acetic acid-amido synthetase, expressed K14506: jasmonic acid-amino synthetase
9 Sobic.006G062200 DNA cross-link repair 1A protein, putative, expressed K15340: DCLRE1A, SNM1A, DNA cross-link repair 1A protein
10 Sobic.010G187201 - -
11 Sobic.004G173400 expressed protein -
12 Sobic.002G057050 - -
13 Sobic.001G116200 PPR repeat domain containing protein, putative, expressed -
14 Sobic.001G248600 "GA biosynthetic gene, causes dwarfism accompanied by unusual culm bending in the mutants"(PubMedID : 24924234)@ent-kaurene synthase, chloroplast precursor, putative, expressed K04120: ent-copalyl diphosphate synthase
15 Sobic.006G116300 OsFBDUF22 - F-box and DUF domain containing protein, expressed -
16 Sobic.005G203500 LZ-NBS-LRR class RGA, putative, expressed -
17 Sobic.004G193200 tRNA pseudouridine synthase family protein, putative, expressed K06173: truA, tRNA pseudouridine38-40 synthase
18 Sobic.009G031450 - -
19 Sobic.006G281600 OsSigP6 - Putative Type I Signal Peptidase homologue@ employs a putative Ser/Lys catalytic dyad, expressed K03100: signal peptidase I
20 Sobic.006G020600 3-ketoacyl-CoA synthase 6, putative, expressed -


Gene co-expression network
sample Sobic007G022400 Sobic007G022400 Sobic001G535300 Sobic001G535300 Sobic007G022400--Sobic001G535300 Sobic002G128750 Sobic002G128750 Sobic007G022400--Sobic002G128750 Sobic006G045200 Sobic006G045200 Sobic007G022400--Sobic006G045200 Sobic008G038700 Sobic008G038700 Sobic007G022400--Sobic008G038700 Sobic003G073700 Sobic003G073700 Sobic007G022400--Sobic003G073700 Sobic009G063450 Sobic009G063450 Sobic007G022400--Sobic009G063450 Sobic005G031800 Sobic005G031800 Sobic007G022400--Sobic005G031800 Sobic005G108300 Sobic005G108300 Sobic007G022400--Sobic005G108300 Sobic006G062200 Sobic006G062200 Sobic007G022400--Sobic006G062200 Sobic001G535300--Sobic002G128750 Sobic001G535300--Sobic007G022400 Sobic001G535300--Sobic009G063450 Sobic001G535300--Sobic003G073700 Sobic001G535300--Sobic006G045200 Sobic010G187201 Sobic010G187201 Sobic001G535300--Sobic010G187201 Sobic001G177500 Sobic001G177500 Sobic001G535300--Sobic001G177500 Sobic002G013500 Sobic002G013500 Sobic001G535300--Sobic002G013500 Sobic002G085700 Sobic002G085700 Sobic001G535300--Sobic002G085700 Sobic002G128750--Sobic001G177500 Sobic001G370100 Sobic001G370100 Sobic002G128750--Sobic001G370100 Sobic002G227800 Sobic002G227800 Sobic002G128750--Sobic002G227800 Sobic002G128750--Sobic002G013500 Sobic002G128750--Sobic002G085700 Sobic007G100900 Sobic007G100900 Sobic002G128750--Sobic007G100900 Sobic002G289701 Sobic002G289701 Sobic002G128750--Sobic002G289701 Sobic006G088500 Sobic006G088500 Sobic002G128750--Sobic006G088500 Sobic002G128750--Sobic001G535300 Sobic006G045200--Sobic001G535300 Sobic006G045200--Sobic002G128750 Sobic006G045200--Sobic007G022400 Sobic004G193200 Sobic004G193200 Sobic006G045200--Sobic004G193200 Sobic001G242350 Sobic001G242350 Sobic006G045200--Sobic001G242350 Sobic001G444100 Sobic001G444100 Sobic006G045200--Sobic001G444100 Sobic006G045200--Sobic001G177500 Sobic006G045200--Sobic002G013500 Sobic005G204400 Sobic005G204400 Sobic006G045200--Sobic005G204400 Sobic008G038700--Sobic007G022400 Sobic002G057050 Sobic002G057050 Sobic008G038700--Sobic002G057050 Sobic008G038700--Sobic002G128750 Sobic002G319700 Sobic002G319700 Sobic008G038700--Sobic002G319700 Sobic008G059566 Sobic008G059566 Sobic008G038700--Sobic008G059566 Sobic008G014900 Sobic008G014900 Sobic008G038700--Sobic008G014900 Sobic001G022000 Sobic001G022000 Sobic008G038700--Sobic001G022000 Sobic001G248600 Sobic001G248600 Sobic008G038700--Sobic001G248600 Sobic003G118700 Sobic003G118700 Sobic008G038700--Sobic003G118700 Sobic003G073700--Sobic010G187201 Sobic003G073700--Sobic001G535300 Sobic006G281600 Sobic006G281600 Sobic003G073700--Sobic006G281600 Sobic003G073700--Sobic007G022400 Sobic003G167800 Sobic003G167800 Sobic003G073700--Sobic003G167800 Sobic001G116200 Sobic001G116200 Sobic003G073700--Sobic001G116200 Sobic003G244800 Sobic003G244800 Sobic003G073700--Sobic003G244800 Sobic003G073700--Sobic002G128750 Sobic001G252200 Sobic001G252200 Sobic003G073700--Sobic001G252200 Sobic009G063450--Sobic001G535300 Sobic009G063450--Sobic002G128750 Sobic009G063450--Sobic002G057050 Sobic009G031450 Sobic009G031450 Sobic009G063450--Sobic009G031450 Sobic004G290400 Sobic004G290400 Sobic009G063450--Sobic004G290400 Sobic009G063450--Sobic002G085700 Sobic001G482500 Sobic001G482500 Sobic009G063450--Sobic001G482500 Sobic001G327400 Sobic001G327400 Sobic009G063450--Sobic001G327400 Sobic002G267300 Sobic002G267300 Sobic009G063450--Sobic002G267300 Sobic005G031800--Sobic002G128750 Sobic004G173400 Sobic004G173400 Sobic005G031800--Sobic004G173400 Sobic005G031800--Sobic007G022400 Sobic005G031800--Sobic001G535300 Sobic002G289350 Sobic002G289350 Sobic005G031800--Sobic002G289350 Sobic005G031800--Sobic006G045200 Sobic004G143100 Sobic004G143100 Sobic005G031800--Sobic004G143100 Sobic005G135500 Sobic005G135500 Sobic005G031800--Sobic005G135500 Sobic005G031800--Sobic002G227800 Sobic003G176100 Sobic003G176100 Sobic005G108300--Sobic003G176100 Sobic010G146200 Sobic010G146200 Sobic005G108300--Sobic010G146200 Sobic007G059300 Sobic007G059300 Sobic005G108300--Sobic007G059300 Sobic006G020600 Sobic006G020600 Sobic005G108300--Sobic006G020600 Sobic009G113600 Sobic009G113600 Sobic005G108300--Sobic009G113600 Sobic010G050600 Sobic010G050600 Sobic005G108300--Sobic010G050600 Sobic008G108900 Sobic008G108900 Sobic005G108300--Sobic008G108900 Sobic008G124100 Sobic008G124100 Sobic005G108300--Sobic008G124100 Sobic009G196700 Sobic009G196700 Sobic005G108300--Sobic009G196700 Sobic001G521900 Sobic001G521900 Sobic006G062200--Sobic001G521900 Sobic002G252600 Sobic002G252600 Sobic006G062200--Sobic002G252600 Sobic004G159600 Sobic004G159600 Sobic006G062200--Sobic004G159600 Sobic006G062200--Sobic002G128750 Sobic006G062200--Sobic009G063450 Sobic006G062200--Sobic001G535300 Sobic006G062200--Sobic006G045200 Sobic006G062200--Sobic004G193200 Sobic006G062200--Sobic001G444100
Octagon: transcription factors


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