Gene annotation
Transcriptome id Sobic.010G190700.1
Synonym Sb10g024070
Functional annotation DUF1680 domain containing protein, putative, expressed
UniProt C5Z624
Pfam PF07944
Panther DB PTHR31151 PTHR31151:SF3
NCBI CDD -
KEGG Orthology K09955; uncharacterized protein
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G12950 : Putative glycosyl hydrolase of unknown function (DUF1680)
RAP-DB (Rice) LOC_Os06g41020.1 : DUF1680 domain containing protein, putative, expressed
MaizeGDB (Corn) Zm00025a051567
Brachypodium KQK17676
Barley HORVU7Hr1G094640.35 , HORVU7Hr1G094640.32 , HORVU7Hr1G094640.33 , HORVU7Hr1G094640.30 , HORVU7Hr1G094640.14 , HORVU7Hr1G094640.15 , HORVU7Hr1G094640.16 , HORVU7Hr1G094640.17 , HORVU7Hr1G094640.12 , HORVU7Hr1G094640.29 , HORVU7Hr1G094640.28 , HORVU7Hr1G094640.21 , HORVU7Hr1G094640.20 , HORVU7Hr1G094640.22 , HORVU7Hr1G094640.25 , HORVU7Hr1G094640.26 , HORVU7Hr1G094640.49 , HORVU7Hr1G094640.48 , HORVU7Hr1G094640.41 , HORVU7Hr1G094640.40 , HORVU7Hr1G094640.47 , HORVU7Hr1G094640.46 , HORVU7Hr1G094640.45 , HORVU6Hr1G033540.9 , HORVU7Hr1G094640.39 , HORVU7Hr1G094640.36 , HORVU7Hr1G094640.37 , HORVU6Hr1G033540.5 , HORVU6Hr1G033540.4 , HORVU6Hr1G033540.3 , HORVU6Hr1G033540.2 , HORVU6Hr1G033540.1 , HORVU7Hr1G094640.50 , HORVU7Hr1G094640.51 , HORVU7Hr1G094640.52 , HORVU7Hr1G094640.53 , HORVU7Hr1G094640.54 , HORVU7Hr1G094640.8 , HORVU7Hr1G094640.9 , HORVU7Hr1G094640.6 , HORVU7Hr1G094640.4 , HORVU7Hr1G094640.5 , HORVU7Hr1G094640.2 , HORVU7Hr1G094640.3 , HORVU7Hr1G094640.1 , HORVU6Hr1G033540.16 , HORVU6Hr1G033540.15 , HORVU6Hr1G033540.13 , HORVU6Hr1G033540.12 , HORVU6Hr1G033540.11 , HORVU6Hr1G033540.10 , HORVU6Hr1G033540.7 , HORVU7Hr1G094640.38 , HORVU6Hr1G033540.8 , HORVU6Hr1G033540.6 , HORVU7Hr1G094640.34
Wheat TraesCS7B02G303700 , TraesCS6A02G165400 , TraesCS7B02G303800 , TraesCS7B02G303800 , TraesCS7D02G397600 , TraesCS7A02G404200 , TraesCS7D02G397500 , TraesCS7A02G404100 , TraesCS7A02G404100
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G133000 1-phosphatidylinositol-4-phosphate 5-kinase/ zinc ion binding protein, putative, expressed K00921: PIKFYVE, 1-phosphatidylinositol-3-phosphate 5-kinase
2 Sobic.003G362200 nucleobase-ascorbate transporter, putative, expressed K14611: SLC23A1, solute carrier family 23 (nucleobase transporter), member 1
3 Sobic.001G217900 PPR repeat domain containing protein, putative, expressed -
4 Sobic.001G478500 expressed protein -
5 Sobic.004G179400 ferrochelatase 2(PubMedID : 26465154)@ferrochelatase-2, chloroplast precursor, putative, expressed K01772: hemH, protoporphyrin/coproporphyrin ferrochelatase
6 Sobic.007G058001 - K15429: TRM5, tRNA (guanine37-N1)-methyltransferase
7 Sobic.001G540600 expressed protein -
8 Sobic.004G143300 high mobility group, putative, expressed -
9 Sobic.009G207900 expressed protein -
10 Sobic.003G179350 - -
11 Sobic.001G244700 RIO1 family protein, expressed K08851: TP53RK, PRPK, TP53 regulating kinase and related kinases
12 Sobic.002G219300 ZOS9-13 - C2H2 zinc finger protein, expressed -
13 Sobic.001G180200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@peroxisomal membrane protein, putative, expressed K13348: protein Mpv17
14 Sobic.001G521200 expressed protein -
15 Sobic.003G345500 ureidoglycolate hydrolase, putative, expressed -
16 Sobic.006G226601 - -
17 Sobic.002G220900 expressed protein -
18 Sobic.006G093100 ferric-chelate reductase, putative, expressed -
19 Sobic.003G125900 DNA gyrase subunit B, chloroplast/mitochondrial precursor, putative, expressed K02470: DNA gyrase subunit B
20 Sobic.006G105750 - -


Gene co-expression network
sample Sobic010G190700 Sobic010G190700 Sobic007G133000 Sobic007G133000 Sobic010G190700--Sobic007G133000 Sobic003G362200 Sobic003G362200 Sobic010G190700--Sobic003G362200 Sobic001G217900 Sobic001G217900 Sobic010G190700--Sobic001G217900 Sobic001G478500 Sobic001G478500 Sobic010G190700--Sobic001G478500 Sobic004G179400 Sobic004G179400 Sobic010G190700--Sobic004G179400 Sobic007G058001 Sobic007G058001 Sobic010G190700--Sobic007G058001 Sobic001G540600 Sobic001G540600 Sobic010G190700--Sobic001G540600 Sobic004G143300 Sobic004G143300 Sobic010G190700--Sobic004G143300 Sobic009G207900 Sobic009G207900 Sobic010G190700--Sobic009G207900 Sobic010G231300 Sobic010G231300 Sobic007G133000--Sobic010G231300 Sobic007G133000--Sobic001G217900 Sobic001G263100 Sobic001G263100 Sobic007G133000--Sobic001G263100 Sobic010G125833 Sobic010G125833 Sobic007G133000--Sobic010G125833 Sobic005G068700 Sobic005G068700 Sobic007G133000--Sobic005G068700 Sobic007G133000--Sobic001G540600 Sobic002G206300 Sobic002G206300 Sobic007G133000--Sobic002G206300 Sobic001G180200 Sobic001G180200 Sobic007G133000--Sobic001G180200 Sobic006G235400 Sobic006G235400 Sobic007G133000--Sobic006G235400 Sobic003G125900 Sobic003G125900 Sobic003G362200--Sobic003G125900 Sobic001G521200 Sobic001G521200 Sobic003G362200--Sobic001G521200 Sobic006G260800 Sobic006G260800 Sobic003G362200--Sobic006G260800 Sobic006G168650 Sobic006G168650 Sobic003G362200--Sobic006G168650 Sobic003G362200--Sobic004G179400 Sobic002G028400 Sobic002G028400 Sobic003G362200--Sobic002G028400 Sobic005G111550 Sobic005G111550 Sobic003G362200--Sobic005G111550 Sobic004G298900 Sobic004G298900 Sobic003G362200--Sobic004G298900 Sobic002G331800 Sobic002G331800 Sobic003G362200--Sobic002G331800 Sobic007G058100 Sobic007G058100 Sobic001G217900--Sobic007G058100 Sobic001G217900--Sobic010G231300 Sobic008G129900 Sobic008G129900 Sobic001G217900--Sobic008G129900 Sobic001G378100 Sobic001G378100 Sobic001G217900--Sobic001G378100 Sobic001G258200 Sobic001G258200 Sobic001G217900--Sobic001G258200 Sobic001G217900--Sobic002G206300 Sobic001G217900--Sobic001G263100 Sobic008G033000 Sobic008G033000 Sobic001G217900--Sobic008G033000 Sobic001G217900--Sobic001G540600 Sobic004G324700 Sobic004G324700 Sobic001G478500--Sobic004G324700 Sobic008G054000 Sobic008G054000 Sobic001G478500--Sobic008G054000 Sobic001G478500--Sobic010G190700 Sobic010G183300 Sobic010G183300 Sobic001G478500--Sobic010G183300 Sobic001G501800 Sobic001G501800 Sobic001G478500--Sobic001G501800 Sobic002G257750 Sobic002G257750 Sobic001G478500--Sobic002G257750 Sobic001G518100 Sobic001G518100 Sobic001G478500--Sobic001G518100 Sobic001G244700 Sobic001G244700 Sobic001G478500--Sobic001G244700 Sobic006G259800 Sobic006G259800 Sobic001G478500--Sobic006G259800 Sobic004G179400--Sobic001G540600 Sobic001G060500 Sobic001G060500 Sobic004G179400--Sobic001G060500 Sobic004G179400--Sobic009G207900 Sobic004G179400--Sobic002G028400 Sobic008G074000 Sobic008G074000 Sobic004G179400--Sobic008G074000 Sobic004G179400--Sobic003G125900 Sobic004G179400--Sobic001G378100 Sobic009G170200 Sobic009G170200 Sobic004G179400--Sobic009G170200 Sobic001G504400 Sobic001G504400 Sobic004G179400--Sobic001G504400 Sobic010G043800 Sobic010G043800 Sobic007G058001--Sobic010G043800 Sobic002G005600 Sobic002G005600 Sobic007G058001--Sobic002G005600 Sobic007G058001--Sobic001G504400 Sobic003G345500 Sobic003G345500 Sobic007G058001--Sobic003G345500 Sobic006G232600 Sobic006G232600 Sobic007G058001--Sobic006G232600 Sobic007G135800 Sobic007G135800 Sobic007G058001--Sobic007G135800 Sobic007G058001--Sobic001G217900 Sobic003G003450 Sobic003G003450 Sobic007G058001--Sobic003G003450 Sobic007G058001--Sobic009G207900 Sobic001G540600--Sobic001G378100 Sobic001G540600--Sobic001G217900 Sobic001G077300 Sobic001G077300 Sobic001G540600--Sobic001G077300 Sobic001G540600--Sobic009G170200 Sobic001G540600--Sobic002G206300 Sobic001G540600--Sobic010G231300 Sobic001G540600--Sobic004G179400 Sobic001G540600--Sobic009G207900 Sobic003G073800 Sobic003G073800 Sobic001G540600--Sobic003G073800 Sobic001G345100 Sobic001G345100 Sobic004G143300--Sobic001G345100 Sobic004G143300--Sobic007G058100 Sobic004G143300--Sobic010G231300 Sobic004G143300--Sobic008G129900 Sobic004G143300--Sobic006G235400 Sobic004G143300--Sobic001G217900 Sobic006G161500 Sobic006G161500 Sobic004G143300--Sobic006G161500 Sobic004G143300--Sobic001G263100 Sobic004G128900 Sobic004G128900 Sobic004G143300--Sobic004G128900 Sobic006G212800 Sobic006G212800 Sobic009G207900--Sobic006G212800 Sobic009G207900--Sobic001G180200 Sobic009G207900--Sobic002G206300 Sobic009G207900--Sobic001G504400 Sobic009G219100 Sobic009G219100 Sobic009G207900--Sobic009G219100 Sobic009G207900--Sobic007G135800 Sobic009G038701 Sobic009G038701 Sobic009G207900--Sobic009G038701 Sobic009G207900--Sobic003G073800 Sobic009G062400 Sobic009G062400 Sobic009G207900--Sobic009G062400
Octagon: transcription factors


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