Gene annotation
Transcriptome id Sobic.003G362200.2,Sobic.003G362200.1
Synonym ATNAT12, Sb03g040390, NAT12
Functional annotation nucleobase-ascorbate transporter, putative, expressed
UniProt C5XQG7 , A0A1W0W0I1
Pfam PF00860
Panther DB PTHR11119 PTHR11119:SF28
NCBI CDD -
KEGG Orthology K14611; SLC23A1, solute carrier family 23 (nucleobase transporter), member 1
Gene Ontology GO:0016020; membrane GO:0006810transport GO:0005215transporter activity


Orthologs (automatic annotation)
TAIR AT2G27810 : nucleobase-ascorbate transporter 12
RAP-DB (Rice) LOC_Os01g63870.1 : nucleobase-ascorbate transporter, putative, expressed
MaizeGDB (Corn) Zm00025a039596
Brachypodium KQK10659
Barley HORVU3Hr1G084540.8 , HORVU3Hr1G084540.9 , HORVU3Hr1G084540.1 , HORVU3Hr1G084540.2 , HORVU3Hr1G084540.3 , HORVU3Hr1G084540.4 , HORVU3Hr1G084540.5 , HORVU3Hr1G084540.6 , HORVU3Hr1G084540.7 , HORVU3Hr1G084540.12 , HORVU3Hr1G084540.10 , HORVU3Hr1G084540.11
Wheat TraesCS3A02G370500 , TraesCS3B02G402700 , TraesCS3D02G363600
Populus PNT21442


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G125900 DNA gyrase subunit B, chloroplast/mitochondrial precursor, putative, expressed K02470: DNA gyrase subunit B
2 Sobic.001G521200 expressed protein -
3 Sobic.006G260800 phosphatidate cytidylyltransferase, putative, expressed K18678: phytol kinase
4 Sobic.006G168650 - -
5 Sobic.004G179400 ferrochelatase 2(PubMedID : 26465154)@ferrochelatase-2, chloroplast precursor, putative, expressed K01772: hemH, protoporphyrin/coproporphyrin ferrochelatase
6 Sobic.002G028400 mTERF domain containing protein, expressed K15032: mTERF domain-containing protein, mitochondrial
7 Sobic.005G111550 - -
8 Sobic.004G298900 OR, putative, expressed -
9 Sobic.002G331800 PPR repeat containing protein, expressed -
10 Sobic.002G324400 PPDK-RP(PubMedID : 19549309)@-(PubMedID : 26976818)@pyruvate orthophosphate dikinase regulatory protein(PubMedID : 27016024)@pyruvate Pi dikinase regulatory protein, putative, expressed K09773: [pyruvate, water dikinase]-phosphate phosphotransferase / [pyruvate, water dikinase] kinase
11 Sobic.009G223200 chloroplastic group IIA intron splicing facilitator CRS1, chloroplast precursor, putative, expressed -
12 Sobic.001G465700 aminotransferase, putative, expressed K00833: adenosylmethionine---8-amino-7-oxononanoate aminotransferase
13 Sobic.002G354600 "Belonging to the Sdw3 locus, Sbi_sdw3"(PubMedID : 20464438)@mTERF family protein, expressed K15032: mTERF domain-containing protein, mitochondrial
14 Sobic.002G042500 valyl-tRNA synthetase, putative, expressed K01873: VARS, valyl-tRNA synthetase
15 Sobic.003G150800 preprotein translocase subunit secA, chloroplast precursor, putative, expressed K03070: preprotein translocase subunit SecA
16 Sobic.008G006100 MATE efflux protein, putative, expressed -
17 Sobic.003G037300 Twin LOV 1, putative, expressed -
18 Sobic.003G306600 acetamidase, putative, expressed K01455: formamidase
19 Sobic.003G233700 SET domain-containing protein, putative, expressed -
20 Sobic.004G211600 psaB translation factor, putative, expressed -


Gene co-expression network
sample Sobic003G362200 Sobic003G362200 Sobic003G125900 Sobic003G125900 Sobic003G362200--Sobic003G125900 Sobic001G521200 Sobic001G521200 Sobic003G362200--Sobic001G521200 Sobic006G260800 Sobic006G260800 Sobic003G362200--Sobic006G260800 Sobic006G168650 Sobic006G168650 Sobic003G362200--Sobic006G168650 Sobic004G179400 Sobic004G179400 Sobic003G362200--Sobic004G179400 Sobic002G028400 Sobic002G028400 Sobic003G362200--Sobic002G028400 Sobic005G111550 Sobic005G111550 Sobic003G362200--Sobic005G111550 Sobic004G298900 Sobic004G298900 Sobic003G362200--Sobic004G298900 Sobic002G331800 Sobic002G331800 Sobic003G362200--Sobic002G331800 Sobic003G125900--Sobic002G331800 Sobic003G125900--Sobic004G179400 Sobic003G070900 Sobic003G070900 Sobic003G125900--Sobic003G070900 Sobic003G094350 Sobic003G094350 Sobic003G125900--Sobic003G094350 Sobic001G060500 Sobic001G060500 Sobic003G125900--Sobic001G060500 Sobic001G118400 Sobic001G118400 Sobic003G125900--Sobic001G118400 Sobic004G252500 Sobic004G252500 Sobic003G125900--Sobic004G252500 Sobic003G125900--Sobic002G028400 Sobic001G500600 Sobic001G500600 Sobic003G125900--Sobic001G500600 Sobic001G183000 Sobic001G183000 Sobic001G521200--Sobic001G183000 Sobic008G006100 Sobic008G006100 Sobic001G521200--Sobic008G006100 Sobic003G037300 Sobic003G037300 Sobic001G521200--Sobic003G037300 Sobic003G233700 Sobic003G233700 Sobic001G521200--Sobic003G233700 Sobic002G402700 Sobic002G402700 Sobic001G521200--Sobic002G402700 Sobic004G006400 Sobic004G006400 Sobic001G521200--Sobic004G006400 Sobic002G133900 Sobic002G133900 Sobic001G521200--Sobic002G133900 Sobic005G100300 Sobic005G100300 Sobic001G521200--Sobic005G100300 Sobic009G062400 Sobic009G062400 Sobic001G521200--Sobic009G062400 Sobic006G260800--Sobic004G298900 Sobic010G214100 Sobic010G214100 Sobic006G260800--Sobic010G214100 Sobic002G112400 Sobic002G112400 Sobic006G260800--Sobic002G112400 Sobic006G260800--Sobic005G111550 Sobic003G160800 Sobic003G160800 Sobic006G260800--Sobic003G160800 Sobic006G260800--Sobic009G062400 Sobic005G001700 Sobic005G001700 Sobic006G260800--Sobic005G001700 Sobic004G211600 Sobic004G211600 Sobic006G260800--Sobic004G211600 Sobic009G140000 Sobic009G140000 Sobic006G260800--Sobic009G140000 Sobic003G306600 Sobic003G306600 Sobic006G168650--Sobic003G306600 Sobic006G168650--Sobic001G521200 Sobic006G168650--Sobic002G402700 Sobic003G179350 Sobic003G179350 Sobic006G168650--Sobic003G179350 Sobic006G168650--Sobic003G037300 Sobic006G168650--Sobic004G298900 Sobic001G134700 Sobic001G134700 Sobic006G168650--Sobic001G134700 Sobic006G168650--Sobic008G006100 Sobic008G074000 Sobic008G074000 Sobic006G168650--Sobic008G074000 Sobic001G540600 Sobic001G540600 Sobic004G179400--Sobic001G540600 Sobic004G179400--Sobic001G060500 Sobic009G207900 Sobic009G207900 Sobic004G179400--Sobic009G207900 Sobic004G179400--Sobic002G028400 Sobic004G179400--Sobic008G074000 Sobic004G179400--Sobic003G125900 Sobic001G378100 Sobic001G378100 Sobic004G179400--Sobic001G378100 Sobic009G170200 Sobic009G170200 Sobic004G179400--Sobic009G170200 Sobic001G504400 Sobic001G504400 Sobic004G179400--Sobic001G504400 Sobic002G028400--Sobic002G133900 Sobic002G028400--Sobic003G094350 Sobic002G028400--Sobic001G500600 Sobic002G028400--Sobic003G070900 Sobic002G028400--Sobic009G170200 Sobic002G028400--Sobic008G074000 Sobic002G028400--Sobic001G540600 Sobic003G287900 Sobic003G287900 Sobic002G028400--Sobic003G287900 Sobic007G103400 Sobic007G103400 Sobic002G028400--Sobic007G103400 Sobic003G085100 Sobic003G085100 Sobic005G111550--Sobic003G085100 Sobic003G150800 Sobic003G150800 Sobic005G111550--Sobic003G150800 Sobic002G042500 Sobic002G042500 Sobic005G111550--Sobic002G042500 Sobic005G111550--Sobic003G160800 Sobic005G111550--Sobic001G500600 Sobic001G037500 Sobic001G037500 Sobic005G111550--Sobic001G037500 Sobic005G111550--Sobic004G298900 Sobic005G063000 Sobic005G063000 Sobic005G111550--Sobic005G063000 Sobic001G465700 Sobic001G465700 Sobic005G111550--Sobic001G465700 Sobic004G298900--Sobic003G037300 Sobic004G298900--Sobic009G062400 Sobic006G258700 Sobic006G258700 Sobic004G298900--Sobic006G258700 Sobic004G298900--Sobic008G006100 Sobic003G014300 Sobic003G014300 Sobic004G298900--Sobic003G014300 Sobic002G102200 Sobic002G102200 Sobic004G298900--Sobic002G102200 Sobic004G298900--Sobic005G111550 Sobic004G151500 Sobic004G151500 Sobic004G298900--Sobic004G151500 Sobic004G298900--Sobic006G260800 Sobic010G076800 Sobic010G076800 Sobic002G331800--Sobic010G076800 Sobic006G214700 Sobic006G214700 Sobic002G331800--Sobic006G214700 Sobic003G439600 Sobic003G439600 Sobic002G331800--Sobic003G439600 Sobic004G333400 Sobic004G333400 Sobic002G331800--Sobic004G333400 Sobic010G183400 Sobic010G183400 Sobic002G331800--Sobic010G183400 Sobic002G331800--Sobic001G118400 Sobic001G450600 Sobic001G450600 Sobic002G331800--Sobic001G450600 Sobic002G331800--Sobic003G125900 Sobic003G245800 Sobic003G245800 Sobic002G331800--Sobic003G245800
Octagon: transcription factors


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