Gene annotation
Transcriptome id Sobic.010G248400.1
Synonym RPS3, RPM1
Functional annotation disease resistance protein RPM1, putative, expressed
UniProt A0A194YL89
Pfam PF00931
Panther DB PTHR23155 PTHR23155:SF558
NCBI CDD KOG4658; Apoptotic ATPase
KEGG Orthology K13457; RPM1, disease resistance protein RPM1
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G07040 : NB-ARC domain-containing disease resistance protein
RAP-DB (Rice) LOC_Os06g48520.1 : disease resistance protein RPM1, putative, expressed
MaizeGDB (Corn) Zm00025a018337 , Zm00025a018343 , Zm00025a018341
Brachypodium -
Barley -
Wheat TraesCS7B02G324300 , TraesCS7D02G416200 , TraesCS7B02G323800 , TraesCS7A02G423400
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G032500 protein kinase domain containing protein, expressed -
2 Sobic.001G521600 Leucine-rich repeat family protein("PubMedID : 26759170,PubMedID : 24597475")@leucine-rich repeat family protein, putative, expressed K04730: interleukin-1 receptor-associated kinase 1
3 Sobic.002G071600 Not investigated(PubMedID : 23766026)@AP2 domain containing protein, expressed K09286: EREBP-like factor
4 Sobic.005G223700 RGH1A, putative, expressed -
5 Sobic.004G009300 expressed protein -
6 Sobic.009G018300 vrga1, putative, expressed -
7 Sobic.004G337950 - -
8 Sobic.004G008600 receptor protein kinase CLAVATA1 precursor, putative, expressed -
9 Sobic.007G149000 expressed high in CK60 (an inefficient nitrogen user)(PubMedID : 28697783)@cytochrome P450, putative, expressed -
10 Sobic.007G094100 OsWAK108 - OsWAK receptor-like protein kinase, expressed -
11 Sobic.004G119900 expansin precursor, putative, expressed -
12 Sobic.010G269000 bZIP transcription factor domain containing protein, expressed -
13 Sobic.003G215350 - -
14 Sobic.001G239200 hsp20/alpha crystallin family protein, putative, expressed -
15 Sobic.005G226400 RGH1A, putative, expressed -
16 Sobic.007G220400 receptor-like protein kinase 2 precursor, putative, expressed -
17 Sobic.005G216500 plant protein of unknown function domain containing protein, expressed -
18 Sobic.004G188100 expressed protein -
19 Sobic.003G046700 expressed protein -
20 Sobic.001G233100 - -


Gene co-expression network
sample Sobic010G248400 Sobic010G248400 Sobic010G032500 Sobic010G032500 Sobic010G248400--Sobic010G032500 Sobic001G521600 Sobic001G521600 Sobic010G248400--Sobic001G521600 Sobic002G071600 Sobic002G071600 Sobic010G248400--Sobic002G071600 Sobic005G223700 Sobic005G223700 Sobic010G248400--Sobic005G223700 Sobic004G009300 Sobic004G009300 Sobic010G248400--Sobic004G009300 Sobic009G018300 Sobic009G018300 Sobic010G248400--Sobic009G018300 Sobic004G337950 Sobic004G337950 Sobic010G248400--Sobic004G337950 Sobic004G008600 Sobic004G008600 Sobic010G248400--Sobic004G008600 Sobic007G149000 Sobic007G149000 Sobic010G248400--Sobic007G149000 Sobic010G032500--Sobic001G521600 Sobic010G032500--Sobic009G018300 Sobic009G004900 Sobic009G004900 Sobic010G032500--Sobic009G004900 Sobic005G226400 Sobic005G226400 Sobic010G032500--Sobic005G226400 Sobic007G148100 Sobic007G148100 Sobic010G032500--Sobic007G148100 Sobic001G233100 Sobic001G233100 Sobic010G032500--Sobic001G233100 Sobic004G187600 Sobic004G187600 Sobic010G032500--Sobic004G187600 Sobic005G212800 Sobic005G212800 Sobic010G032500--Sobic005G212800 Sobic007G097550 Sobic007G097550 Sobic010G032500--Sobic007G097550 Sobic001G521600--Sobic009G018300 Sobic001G521600--Sobic004G337950 Sobic003G046700 Sobic003G046700 Sobic001G521600--Sobic003G046700 Sobic010G128300 Sobic010G128300 Sobic001G521600--Sobic010G128300 Sobic001G506100 Sobic001G506100 Sobic001G521600--Sobic001G506100 Sobic004G119900 Sobic004G119900 Sobic001G521600--Sobic004G119900 Sobic001G521600--Sobic007G097550 Sobic001G521600--Sobic001G233100 Sobic005G134200 Sobic005G134200 Sobic001G521600--Sobic005G134200 Sobic010G115000 Sobic010G115000 Sobic002G071600--Sobic010G115000 Sobic007G094100 Sobic007G094100 Sobic002G071600--Sobic007G094100 Sobic004G126500 Sobic004G126500 Sobic002G071600--Sobic004G126500 Sobic002G071600--Sobic007G149000 Sobic002G082700 Sobic002G082700 Sobic002G071600--Sobic002G082700 Sobic003G269900 Sobic003G269900 Sobic002G071600--Sobic003G269900 Sobic006G171300 Sobic006G171300 Sobic002G071600--Sobic006G171300 Sobic002G391200 Sobic002G391200 Sobic002G071600--Sobic002G391200 Sobic002G019100 Sobic002G019100 Sobic002G071600--Sobic002G019100 Sobic005G223700--Sobic005G226400 Sobic006G171100 Sobic006G171100 Sobic005G223700--Sobic006G171100 Sobic002G111900 Sobic002G111900 Sobic005G223700--Sobic002G111900 Sobic007G220400 Sobic007G220400 Sobic005G223700--Sobic007G220400 Sobic006G047200 Sobic006G047200 Sobic005G223700--Sobic006G047200 Sobic009G136800 Sobic009G136800 Sobic005G223700--Sobic009G136800 Sobic010G010000 Sobic010G010000 Sobic005G223700--Sobic010G010000 Sobic005G223700--Sobic005G134200 Sobic010G213600 Sobic010G213600 Sobic005G223700--Sobic010G213600 Sobic004G009300--Sobic009G018300 Sobic002G392300 Sobic002G392300 Sobic004G009300--Sobic002G392300 Sobic004G009300--Sobic007G094100 Sobic004G009300--Sobic004G337950 Sobic006G135500 Sobic006G135500 Sobic004G009300--Sobic006G135500 Sobic004G009300--Sobic003G046700 Sobic004G009300--Sobic004G119900 Sobic004G009300--Sobic001G233100 Sobic004G009300--Sobic001G521600 Sobic009G018300--Sobic007G097550 Sobic009G018300--Sobic001G233100 Sobic009G018300--Sobic001G506100 Sobic009G018300--Sobic009G004900 Sobic009G018300--Sobic003G046700 Sobic009G018300--Sobic001G521600 Sobic009G018300--Sobic004G337950 Sobic009G018300--Sobic004G009300 Sobic010G269000 Sobic010G269000 Sobic009G018300--Sobic010G269000 Sobic004G337950--Sobic009G018300 Sobic004G337950--Sobic001G521600 Sobic004G337950--Sobic007G097550 Sobic004G337950--Sobic004G009300 Sobic004G337950--Sobic001G233100 Sobic004G337950--Sobic007G094100 Sobic004G337950--Sobic001G506100 Sobic004G337950--Sobic003G046700 Sobic004G337950--Sobic009G004900 Sobic004G008600--Sobic010G269000 Sobic004G008600--Sobic005G134200 Sobic005G216500 Sobic005G216500 Sobic004G008600--Sobic005G216500 Sobic004G008600--Sobic003G046700 Sobic005G226350 Sobic005G226350 Sobic004G008600--Sobic005G226350 Sobic005G120900 Sobic005G120900 Sobic004G008600--Sobic005G120900 Sobic004G008600--Sobic007G220400 Sobic004G008600--Sobic005G226400 Sobic010G191700 Sobic010G191700 Sobic004G008600--Sobic010G191700 Sobic005G049350 Sobic005G049350 Sobic007G149000--Sobic005G049350 Sobic007G149000--Sobic007G094100 Sobic007G149000--Sobic001G521600 Sobic007G149000--Sobic006G171300 Sobic003G176300 Sobic003G176300 Sobic007G149000--Sobic003G176300 Sobic007G149000--Sobic004G337950 Sobic005G012600 Sobic005G012600 Sobic007G149000--Sobic005G012600 Sobic009G098000 Sobic009G098000 Sobic007G149000--Sobic009G098000 Sobic007G149000--Sobic010G115000
Octagon: transcription factors


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