Gene annotation
Transcriptome id Sobic.K044300.1
Synonym PP, ATPARP1, PARP1, APP
Functional annotation poly synthetase 2-A, putative, expressed
UniProt A0A109ND89
Pfam PF00644
Panther DB PTHR10459 PTHR10459:SF64
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0003950; NAD+ ADP-ribosyltransferase activity


Orthologs (automatic annotation)
TAIR AT4G02390 : poly(ADP-ribose) polymerase
RAP-DB (Rice) LOC_Os01g24940.1 : poly synthetase 2-A, putative, expressed
MaizeGDB (Corn) Zm00025a036236
Brachypodium -
Barley HORVU7Hr1G096270.1 , HORVU7Hr1G096270.3 , HORVU7Hr1G096270.2 , HORVU7Hr1G096270.4 , HORVU7Hr1G096270.7 , HORVU7Hr1G096270.6 , HORVU7Hr1G096270.15 , HORVU7Hr1G096270.14 , HORVU7Hr1G096270.17 , HORVU7Hr1G096270.16 , HORVU7Hr1G096270.13
Wheat -
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G226450 - -
2 Sobic.001G095900 - -
3 Sobic.002G328800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@TKL_IRAK_DUF26-lc.13 - DUF26 kinases have homology to DUF26 containing loci, expressed -
4 Sobic.005G183300 resistance protein, putative, expressed -
5 Sobic.002G253200 thaumatin, putative, expressed -
6 Sobic.010G162500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@reticuline oxidase-like protein precursor, putative, expressed -
7 Sobic.007G072166 - -
8 Sobic.002G070700 anthocyanidin 3-O-glucosyltransferase, putative, expressed -
9 Sobic.010G006300 homeobox domain containing protein, expressed -
10 Sobic.005G156900 - -
11 Sobic.007G189300 DC1 domain containing protein, expressed -
12 Sobic.006G076900 anthocyanin regulatory Lc protein, putative, expressed -
13 Sobic.007G080780 - -
14 Sobic.002G215932 - -
15 Sobic.002G025600 - -
16 Sobic.001G011700 aspartokinase, chloroplast precursor, putative, expressed K00928: aspartate kinase
17 Sobic.005G081100 - -
18 Sobic.001G276400 peptide transporter PTR2, putative, expressed K14638: SLC15A3_4, solute carrier family 15 (peptide/histidine transporter), member 3/4
19 Sobic.002G079200 EF hand family protein, putative, expressed K02183: calmodulin
20 Sobic.001G270301 - -


Gene co-expression network
sample SobicK044300 SobicK044300 Sobic005G226450 Sobic005G226450 SobicK044300--Sobic005G226450 Sobic001G095900 Sobic001G095900 SobicK044300--Sobic001G095900 Sobic002G328800 Sobic002G328800 SobicK044300--Sobic002G328800 Sobic005G183300 Sobic005G183300 SobicK044300--Sobic005G183300 Sobic002G253200 Sobic002G253200 SobicK044300--Sobic002G253200 Sobic010G162500 Sobic010G162500 SobicK044300--Sobic010G162500 Sobic007G072166 Sobic007G072166 SobicK044300--Sobic007G072166 Sobic002G070700 Sobic002G070700 SobicK044300--Sobic002G070700 Sobic010G006300 Sobic010G006300 SobicK044300--Sobic010G006300 Sobic006G029900 Sobic006G029900 Sobic005G226450--Sobic006G029900 Sobic005G226450--Sobic002G253200 Sobic005G081100 Sobic005G081100 Sobic005G226450--Sobic005G081100 Sobic005G226450--SobicK044300 Sobic008G019000 Sobic008G019000 Sobic005G226450--Sobic008G019000 Sobic001G343300 Sobic001G343300 Sobic005G226450--Sobic001G343300 Sobic002G285600 Sobic002G285600 Sobic005G226450--Sobic002G285600 Sobic005G226450--Sobic007G072166 Sobic005G226450--Sobic005G183300 Sobic010G276301 Sobic010G276301 Sobic001G095900--Sobic010G276301 Sobic002G079200 Sobic002G079200 Sobic001G095900--Sobic002G079200 Sobic001G095900--Sobic010G162500 Sobic005G156900 Sobic005G156900 Sobic001G095900--Sobic005G156900 Sobic006G190150 Sobic006G190150 Sobic001G095900--Sobic006G190150 Sobic007G189300 Sobic007G189300 Sobic001G095900--Sobic007G189300 Sobic008G167401 Sobic008G167401 Sobic001G095900--Sobic008G167401 Sobic002G288800 Sobic002G288800 Sobic001G095900--Sobic002G288800 Sobic001G095900--Sobic010G006300 Sobic010G276400 Sobic010G276400 Sobic002G328800--Sobic010G276400 Sobic010G109500 Sobic010G109500 Sobic002G328800--Sobic010G109500 Sobic006G234100 Sobic006G234100 Sobic002G328800--Sobic006G234100 Sobic001G448400 Sobic001G448400 Sobic002G328800--Sobic001G448400 Sobic004G343300 Sobic004G343300 Sobic002G328800--Sobic004G343300 Sobic003G052500 Sobic003G052500 Sobic002G328800--Sobic003G052500 Sobic010G241000 Sobic010G241000 Sobic002G328800--Sobic010G241000 Sobic002G339200 Sobic002G339200 Sobic002G328800--Sobic002G339200 Sobic003G209800 Sobic003G209800 Sobic002G328800--Sobic003G209800 Sobic005G183300--Sobic001G343300 Sobic001G336800 Sobic001G336800 Sobic005G183300--Sobic001G336800 Sobic001G307300 Sobic001G307300 Sobic005G183300--Sobic001G307300 Sobic002G397400 Sobic002G397400 Sobic005G183300--Sobic002G397400 Sobic005G218700 Sobic005G218700 Sobic005G183300--Sobic005G218700 Sobic005G183500 Sobic005G183500 Sobic005G183300--Sobic005G183500 Sobic001G448750 Sobic001G448750 Sobic005G183300--Sobic001G448750 Sobic008G163200 Sobic008G163200 Sobic005G183300--Sobic008G163200 Sobic005G029400 Sobic005G029400 Sobic005G183300--Sobic005G029400 Sobic007G135301 Sobic007G135301 Sobic002G253200--Sobic007G135301 Sobic007G223150 Sobic007G223150 Sobic002G253200--Sobic007G223150 Sobic001G417100 Sobic001G417100 Sobic002G253200--Sobic001G417100 Sobic001G028301 Sobic001G028301 Sobic002G253200--Sobic001G028301 Sobic001G448900 Sobic001G448900 Sobic002G253200--Sobic001G448900 Sobic007G115050 Sobic007G115050 Sobic002G253200--Sobic007G115050 Sobic008G174400 Sobic008G174400 Sobic002G253200--Sobic008G174400 Sobic002G373500 Sobic002G373500 Sobic002G253200--Sobic002G373500 Sobic005G083932 Sobic005G083932 Sobic002G253200--Sobic005G083932 Sobic010G162500--Sobic010G006300 Sobic007G028200 Sobic007G028200 Sobic010G162500--Sobic007G028200 Sobic001G176700 Sobic001G176700 Sobic010G162500--Sobic001G176700 Sobic003G285600 Sobic003G285600 Sobic010G162500--Sobic003G285600 Sobic007G141300 Sobic007G141300 Sobic010G162500--Sobic007G141300 Sobic001G252401 Sobic001G252401 Sobic010G162500--Sobic001G252401 Sobic010G162200 Sobic010G162200 Sobic010G162500--Sobic010G162200 Sobic003G097701 Sobic003G097701 Sobic010G162500--Sobic003G097701 Sobic010G263500 Sobic010G263500 Sobic010G162500--Sobic010G263500 Sobic007G072166--Sobic002G070700 Sobic003G080500 Sobic003G080500 Sobic007G072166--Sobic003G080500 Sobic007G072166--Sobic002G253200 Sobic010G004500 Sobic010G004500 Sobic007G072166--Sobic010G004500 Sobic007G072166--Sobic001G028301 Sobic007G072166--Sobic007G223150 Sobic007G072166--Sobic001G417100 Sobic007G072166--Sobic007G135301 Sobic006G030250 Sobic006G030250 Sobic007G072166--Sobic006G030250 Sobic002G070700--Sobic003G080500 Sobic002G070700--Sobic007G072166 Sobic002G070700--Sobic007G189300 Sobic002G070700--Sobic006G030250 Sobic010G127500 Sobic010G127500 Sobic002G070700--Sobic010G127500 Sobic002G070700--Sobic001G028301 Sobic002G070700--Sobic007G223150 Sobic005G134301 Sobic005G134301 Sobic002G070700--Sobic005G134301 Sobic008G091100 Sobic008G091100 Sobic002G070700--Sobic008G091100 Sobic010G006300--Sobic010G162500 Sobic010G006300--Sobic001G252401 Sobic010G006300--Sobic003G285600 Sobic010G006300--Sobic001G176700 Sobic010G006300--Sobic007G028200 Sobic003G403800 Sobic003G403800 Sobic010G006300--Sobic003G403800 Sobic006G122500 Sobic006G122500 Sobic010G006300--Sobic006G122500 Sobic007G080780 Sobic007G080780 Sobic010G006300--Sobic007G080780 Sobic001G276400 Sobic001G276400 Sobic010G006300--Sobic001G276400
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.