Gene annotation
Transcriptome id Sobic.001G006800.1
Synonym
Functional annotation -
UniProt A0A1B6QGP4
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os03g11480.1 : expressed protein
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G163400 dnaJ domain containing protein, expressed -
2 Sobic.001G210000 CDT1B - Putative DNA replication initiation protein, expressed K10727: chromatin licensing and DNA replication factor 1
3 Sobic.009G077300 protein kinase, putative, expressed -
4 Sobic.010G026100 expressed protein -
5 Sobic.002G050700 tesmin/TSO1-like CXC domain containing protein, expressed -
6 Sobic.006G221800 OsFBX46 - F-box domain containing protein, expressed -
7 Sobic.001G390400 expressed protein -
8 Sobic.001G054700 seed specific protein Bn15D14A, putative, expressed -
9 Sobic.005G153000 agenet domain containing protein, expressed -
10 Sobic.007G188001 - K11844: ubiquitin carboxyl-terminal hydrolase 16/45
11 Sobic.010G024500 expressed protein -
12 Sobic.009G045300 OsFBL21 - F-box domain and LRR containing protein, expressed K14485: transport inhibitor response 1
13 Sobic.001G290500 protein kinase family protein, putative, expressed K14500: BR-signaling kinase
14 Sobic.003G129500 argonaute, putative, expressed K11593: ELF2C, eukaryotic translation initiation factor 2C
15 Sobic.009G057800 kelch repeat-containing protein, putative, expressed -
16 Sobic.008G159901 - K08857: NIMA (never in mitosis gene a)-related kinase 1/4/5
17 Sobic.002G021200 expressed protein K19001: HELLS, ATP-dependent DNA helicase
18 Sobic.009G207400 ATP binding protein, putative, expressed -
19 Sobic.004G307900 expressed protein K10875: RAD54L, DNA repair and recombination protein RAD54 and RAD54-like protein
20 Sobic.010G250400 OsSub52 - Putative Subtilisin homologue, expressed -


Gene co-expression network
sample Sobic001G006800 Sobic001G006800 Sobic005G163400 Sobic005G163400 Sobic001G006800--Sobic005G163400 Sobic001G210000 Sobic001G210000 Sobic001G006800--Sobic001G210000 Sobic009G077300 Sobic009G077300 Sobic001G006800--Sobic009G077300 Sobic010G026100 Sobic010G026100 Sobic001G006800--Sobic010G026100 Sobic002G050700 Sobic002G050700 Sobic001G006800--Sobic002G050700 Sobic006G221800 Sobic006G221800 Sobic001G006800--Sobic006G221800 Sobic001G390400 Sobic001G390400 Sobic001G006800--Sobic001G390400 Sobic001G054700 Sobic001G054700 Sobic001G006800--Sobic001G054700 Sobic005G153000 Sobic005G153000 Sobic001G006800--Sobic005G153000 Sobic010G024500 Sobic010G024500 Sobic005G163400--Sobic010G024500 Sobic005G163400--Sobic001G390400 Sobic005G163400--Sobic009G077300 Sobic003G104100 Sobic003G104100 Sobic005G163400--Sobic003G104100 Sobic008G052300 Sobic008G052300 Sobic005G163400--Sobic008G052300 Sobic008G190000 Sobic008G190000 Sobic005G163400--Sobic008G190000 Sobic005G163400--Sobic001G054700 Sobic005G163400--Sobic005G153000 Sobic005G163400--Sobic002G050700 Sobic001G210000--Sobic001G006800 Sobic003G212600 Sobic003G212600 Sobic001G210000--Sobic003G212600 Sobic007G031300 Sobic007G031300 Sobic001G210000--Sobic007G031300 Sobic009G087300 Sobic009G087300 Sobic001G210000--Sobic009G087300 Sobic007G209600 Sobic007G209600 Sobic001G210000--Sobic007G209600 Sobic009G049200 Sobic009G049200 Sobic001G210000--Sobic009G049200 Sobic006G242500 Sobic006G242500 Sobic001G210000--Sobic006G242500 Sobic004G287100 Sobic004G287100 Sobic001G210000--Sobic004G287100 Sobic001G210000--Sobic005G163400 Sobic009G077300--Sobic005G153000 Sobic006G221300 Sobic006G221300 Sobic009G077300--Sobic006G221300 Sobic009G077300--Sobic001G054700 Sobic009G077300--Sobic005G163400 Sobic002G168000 Sobic002G168000 Sobic009G077300--Sobic002G168000 Sobic009G077300--Sobic002G050700 Sobic004G282601 Sobic004G282601 Sobic009G077300--Sobic004G282601 Sobic009G143200 Sobic009G143200 Sobic009G077300--Sobic009G143200 Sobic007G187700 Sobic007G187700 Sobic009G077300--Sobic007G187700 Sobic010G026100--Sobic002G050700 Sobic010G026100--Sobic006G221800 Sobic004G003700 Sobic004G003700 Sobic010G026100--Sobic004G003700 Sobic001G101700 Sobic001G101700 Sobic010G026100--Sobic001G101700 Sobic005G062600 Sobic005G062600 Sobic010G026100--Sobic005G062600 Sobic001G143400 Sobic001G143400 Sobic010G026100--Sobic001G143400 Sobic001G379900 Sobic001G379900 Sobic010G026100--Sobic001G379900 Sobic010G026100--Sobic001G006800 Sobic006G232900 Sobic006G232900 Sobic010G026100--Sobic006G232900 Sobic002G050700--Sobic006G221800 Sobic002G050700--Sobic001G390400 Sobic002G050700--Sobic001G054700 Sobic001G079900 Sobic001G079900 Sobic002G050700--Sobic001G079900 Sobic002G050700--Sobic009G077300 Sobic002G050700--Sobic004G003700 Sobic002G050700--Sobic001G101700 Sobic001G496400 Sobic001G496400 Sobic002G050700--Sobic001G496400 Sobic002G050700--Sobic006G221300 Sobic006G221800--Sobic001G496400 Sobic006G221800--Sobic001G101700 Sobic008G114900 Sobic008G114900 Sobic006G221800--Sobic008G114900 Sobic006G221800--Sobic004G003700 Sobic006G221800--Sobic002G050700 Sobic008G151600 Sobic008G151600 Sobic006G221800--Sobic008G151600 Sobic002G319300 Sobic002G319300 Sobic006G221800--Sobic002G319300 Sobic009G087700 Sobic009G087700 Sobic006G221800--Sobic009G087700 Sobic001G493900 Sobic001G493900 Sobic006G221800--Sobic001G493900 Sobic003G366000 Sobic003G366000 Sobic001G390400--Sobic003G366000 Sobic001G390400--Sobic005G163400 Sobic006G050900 Sobic006G050900 Sobic001G390400--Sobic006G050900 Sobic001G390400--Sobic002G050700 Sobic010G192500 Sobic010G192500 Sobic001G390400--Sobic010G192500 Sobic004G317200 Sobic004G317200 Sobic001G390400--Sobic004G317200 Sobic001G390400--Sobic002G319300 Sobic001G390400--Sobic010G024500 Sobic006G142500 Sobic006G142500 Sobic001G390400--Sobic006G142500 Sobic001G054700--Sobic006G221300 Sobic001G054700--Sobic009G077300 Sobic004G108400 Sobic004G108400 Sobic001G054700--Sobic004G108400 Sobic001G054700--Sobic009G143200 Sobic001G054700--Sobic002G050700 Sobic006G124400 Sobic006G124400 Sobic001G054700--Sobic006G124400 Sobic009G127800 Sobic009G127800 Sobic001G054700--Sobic009G127800 Sobic001G054700--Sobic005G153000 Sobic001G054700--Sobic006G221800 Sobic005G153000--Sobic009G077300 Sobic005G153000--Sobic002G168000 Sobic005G153000--Sobic004G282601 Sobic010G037901 Sobic010G037901 Sobic005G153000--Sobic010G037901 Sobic003G290400 Sobic003G290400 Sobic005G153000--Sobic003G290400 Sobic005G153000--Sobic007G187700 Sobic005G153000--Sobic006G221300 Sobic003G129500 Sobic003G129500 Sobic005G153000--Sobic003G129500 Sobic005G196600 Sobic005G196600 Sobic005G153000--Sobic005G196600
Octagon: transcription factors


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