Gene annotation
Transcriptome id Sobic.001G037200.1
Synonym
Functional annotation -
UniProt A0A1B6QH67
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G295300 -(PubMedID : 21930910)@-(PubMedID : 24884377)@osFTL9 FT-Like9 homologous to Flowering Locus T gene@ contains Pfam profile PF01161: Phosphatidylethanolamine-binding protein K16223: protein FLOWERING LOCUS T
2 Sobic.005G193300 stripe rust resistance protein Yr10, putative, expressed -
3 Sobic.007G133000 1-phosphatidylinositol-4-phosphate 5-kinase/ zinc ion binding protein, putative, expressed K00921: PIKFYVE, 1-phosphatidylinositol-3-phosphate 5-kinase
4 Sobic.005G005400 MATE efflux family protein(PubMedID : 26465154)@MATE efflux protein, putative, expressed -
5 Sobic.002G173100 Leucine Rich Repeat family protein, expressed -
6 Sobic.005G093800 NB-ARC domain containing protein, expressed K13457: RPM1, disease resistance protein RPM1
7 Sobic.005G142700 heparan-alpha-glucosaminide N-acetyltransferase, putative, expressed -
8 Sobic.003G073800 phosphatidate cytidylyltransferase, putative, expressed K00981: E2.7.7.41, CDS1, CDS2, phosphatidate cytidylyltransferase
9 Sobic.002G244200 nucleolar GTP-binding protein 1, putative, expressed -
10 Sobic.008G157100 "BZIP transcription factor family protein, predicted target of novel-mir-617 expressed in the stems of sweet sorghum"(PubMedID : 26117170)@down-regulated TF in developmental senescence(PubMedID : 27586543)@bZIP transcription factor domain containing protein, expressed -
11 Sobic.001G160800 integral membrane protein DUF6 containing protein, expressed -
12 Sobic.004G271600 region found in RelA/SpoT proteins containing protein, expressed -
13 Sobic.003G012400 flavin monooxygenase, putative, expressed -
14 Sobic.001G411400 response regulator receiver domain containing protein, expressed K12129: pseudo-response regulator 7
15 Sobic.001G492600 VQ domain containing protein, putative, expressed -
16 Sobic.003G080700 Ser/Thr protein kinase, putative, expressed -
17 Sobic.008G077500 cytochrome b5-like Heme/Steroid binding domain containing protein, expressed -
18 Sobic.003G190100 vacuolar-processing enzyme precursor, putative, expressed K01369: legumain
19 Sobic.003G160100 - -
20 Sobic.001G368600 NAD dependent epimerase/dehydratase family protein, putative, expressed -


Gene co-expression network
sample Sobic001G037200 Sobic001G037200 Sobic003G295300 Sobic003G295300 Sobic001G037200--Sobic003G295300 Sobic005G193300 Sobic005G193300 Sobic001G037200--Sobic005G193300 Sobic007G133000 Sobic007G133000 Sobic001G037200--Sobic007G133000 Sobic005G005400 Sobic005G005400 Sobic001G037200--Sobic005G005400 Sobic002G173100 Sobic002G173100 Sobic001G037200--Sobic002G173100 Sobic005G093800 Sobic005G093800 Sobic001G037200--Sobic005G093800 Sobic005G142700 Sobic005G142700 Sobic001G037200--Sobic005G142700 Sobic003G073800 Sobic003G073800 Sobic001G037200--Sobic003G073800 Sobic002G244200 Sobic002G244200 Sobic001G037200--Sobic002G244200 Sobic003G295300--Sobic005G193300 Sobic004G223400 Sobic004G223400 Sobic003G295300--Sobic004G223400 Sobic002G324400 Sobic002G324400 Sobic003G295300--Sobic002G324400 Sobic003G080300 Sobic003G080300 Sobic003G295300--Sobic003G080300 Sobic004G271600 Sobic004G271600 Sobic003G295300--Sobic004G271600 Sobic010G138800 Sobic010G138800 Sobic003G295300--Sobic010G138800 Sobic005G179300 Sobic005G179300 Sobic003G295300--Sobic005G179300 Sobic002G408000 Sobic002G408000 Sobic003G295300--Sobic002G408000 Sobic003G295300--Sobic005G005400 Sobic005G193300--Sobic003G295300 Sobic001G499100 Sobic001G499100 Sobic005G193300--Sobic001G499100 Sobic001G317800 Sobic001G317800 Sobic005G193300--Sobic001G317800 Sobic003G306200 Sobic003G306200 Sobic005G193300--Sobic003G306200 Sobic008G149100 Sobic008G149100 Sobic005G193300--Sobic008G149100 Sobic005G193300--Sobic003G073800 Sobic006G145800 Sobic006G145800 Sobic005G193300--Sobic006G145800 Sobic009G256100 Sobic009G256100 Sobic005G193300--Sobic009G256100 Sobic007G058100 Sobic007G058100 Sobic005G193300--Sobic007G058100 Sobic010G231300 Sobic010G231300 Sobic007G133000--Sobic010G231300 Sobic001G217900 Sobic001G217900 Sobic007G133000--Sobic001G217900 Sobic001G263100 Sobic001G263100 Sobic007G133000--Sobic001G263100 Sobic010G125833 Sobic010G125833 Sobic007G133000--Sobic010G125833 Sobic005G068700 Sobic005G068700 Sobic007G133000--Sobic005G068700 Sobic001G540600 Sobic001G540600 Sobic007G133000--Sobic001G540600 Sobic002G206300 Sobic002G206300 Sobic007G133000--Sobic002G206300 Sobic001G180200 Sobic001G180200 Sobic007G133000--Sobic001G180200 Sobic006G235400 Sobic006G235400 Sobic007G133000--Sobic006G235400 Sobic006G097500 Sobic006G097500 Sobic005G005400--Sobic006G097500 Sobic001G368600 Sobic001G368600 Sobic005G005400--Sobic001G368600 Sobic004G103300 Sobic004G103300 Sobic005G005400--Sobic004G103300 Sobic002G298800 Sobic002G298800 Sobic005G005400--Sobic002G298800 Sobic007G124500 Sobic007G124500 Sobic005G005400--Sobic007G124500 Sobic001G393300 Sobic001G393300 Sobic005G005400--Sobic001G393300 Sobic002G072500 Sobic002G072500 Sobic005G005400--Sobic002G072500 Sobic010G231500 Sobic010G231500 Sobic005G005400--Sobic010G231500 Sobic006G265900 Sobic006G265900 Sobic005G005400--Sobic006G265900 Sobic003G190100 Sobic003G190100 Sobic002G173100--Sobic003G190100 Sobic003G108900 Sobic003G108900 Sobic002G173100--Sobic003G108900 Sobic003G203300 Sobic003G203300 Sobic002G173100--Sobic003G203300 Sobic001G060500 Sobic001G060500 Sobic002G173100--Sobic001G060500 Sobic003G190000 Sobic003G190000 Sobic002G173100--Sobic003G190000 Sobic005G075100 Sobic005G075100 Sobic002G173100--Sobic005G075100 Sobic002G173100--Sobic004G271600 Sobic002G173100--Sobic005G179300 Sobic004G300000 Sobic004G300000 Sobic002G173100--Sobic004G300000 Sobic005G093800--Sobic003G190100 Sobic006G177900 Sobic006G177900 Sobic005G093800--Sobic006G177900 Sobic005G093800--Sobic004G271600 Sobic005G093800--Sobic002G173100 Sobic002G077400 Sobic002G077400 Sobic005G093800--Sobic002G077400 Sobic010G121200 Sobic010G121200 Sobic005G093800--Sobic010G121200 Sobic002G115050 Sobic002G115050 Sobic005G093800--Sobic002G115050 Sobic008G166550 Sobic008G166550 Sobic005G093800--Sobic008G166550 Sobic001G492600 Sobic001G492600 Sobic005G093800--Sobic001G492600 Sobic003G157900 Sobic003G157900 Sobic005G142700--Sobic003G157900 Sobic001G314400 Sobic001G314400 Sobic005G142700--Sobic001G314400 Sobic007G090900 Sobic007G090900 Sobic005G142700--Sobic007G090900 Sobic003G329700 Sobic003G329700 Sobic005G142700--Sobic003G329700 Sobic008G077500 Sobic008G077500 Sobic005G142700--Sobic008G077500 Sobic008G190200 Sobic008G190200 Sobic005G142700--Sobic008G190200 Sobic002G136100 Sobic002G136100 Sobic005G142700--Sobic002G136100 Sobic006G212800 Sobic006G212800 Sobic005G142700--Sobic006G212800 Sobic003G397600 Sobic003G397600 Sobic005G142700--Sobic003G397600 Sobic001G378100 Sobic001G378100 Sobic003G073800--Sobic001G378100 Sobic001G077300 Sobic001G077300 Sobic003G073800--Sobic001G077300 Sobic003G073800--Sobic001G180200 Sobic009G207900 Sobic009G207900 Sobic003G073800--Sobic009G207900 Sobic001G536700 Sobic001G536700 Sobic003G073800--Sobic001G536700 Sobic009G073900 Sobic009G073900 Sobic003G073800--Sobic009G073900 Sobic006G090100 Sobic006G090100 Sobic003G073800--Sobic006G090100 Sobic003G073800--Sobic007G058100 Sobic003G073800--Sobic002G206300 Sobic009G248801 Sobic009G248801 Sobic002G244200--Sobic009G248801 Sobic005G095000 Sobic005G095000 Sobic002G244200--Sobic005G095000 Sobic002G244200--Sobic008G166550 Sobic007G090403 Sobic007G090403 Sobic002G244200--Sobic007G090403 Sobic002G244200--Sobic007G133000 Sobic003G160100 Sobic003G160100 Sobic002G244200--Sobic003G160100 Sobic004G086150 Sobic004G086150 Sobic002G244200--Sobic004G086150 Sobic007G202300 Sobic007G202300 Sobic002G244200--Sobic007G202300 Sobic003G416000 Sobic003G416000 Sobic002G244200--Sobic003G416000
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.