Gene annotation
Transcriptome id Sobic.001G074400.1
Synonym Sb01g006730
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
stress-induced protein, putative, expressed
UniProt C5WZ70
Pfam PF06219
Panther DB PTHR31317 PTHR31317:SF6
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G10020 : Protein of unknown function (DUF1005)
RAP-DB (Rice) LOC_Os03g56220.1 : stress-induced protein, putative, expressed
MaizeGDB (Corn) Zm00025a021320 , Zm00025a008362 , Zm00025a038970 , Zm00025a016686 , Zm00025a016190 , Zm00025a044964
Brachypodium KQK12982 , KQK20973
Barley HORVU5Hr1G098720.1 , HORVU0Hr1G003930.3 , HORVU0Hr1G003930.2 , HORVU0Hr1G003930.7 , HORVU0Hr1G003930.6 , HORVU0Hr1G003930.4 , HORVU0Hr1G003930.9 , HORVU0Hr1G003930.8 , HORVU0Hr1G003930.13 , HORVU0Hr1G003930.12 , HORVU0Hr1G003930.11 , HORVU0Hr1G003930.10
Wheat TraesCS2B02G268300 , TraesCS2A02G267900 , TraesCS2D02G256200
Populus -


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cDNA sequences
Sobic.001G074400


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G348000 STE_PAK_Ste20_Slob_Wnk.4 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed K08867: WNK, WNK lysine deficient protein kinase
2 Sobic.001G420700 clathrin assembly protein, putative, expressed -
3 Sobic.004G053300 tubulin/FtsZ domain containing protein, putative, expressed K07375: tubulin beta
4 Sobic.002G205900 receptor-like protein kinase 2 precursor, putative, expressed -
5 Sobic.005G046100 bZIP transcription factor domain containing protein, expressed -
6 Sobic.004G201300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@BTBN3 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with non-phototropic hypocotyl 3 NPH3 domain, expressed -
7 Sobic.003G356200 homeodomain protein, putative, expressed -
8 Sobic.009G013100 rp3 protein, putative, expressed -
9 Sobic.009G230700 Trihelix Family(PubMedID : 24864043)@transcription factor like protein, putative, expressed -
10 Sobic.003G399000 expressed protein -
11 Sobic.008G109100 expressed protein -
12 Sobic.007G136700 YGL010w, putative, expressed -
13 Sobic.008G136000 DnaK family protein, putative, expressed K03283: heat shock 70kDa protein 1/2/6/8
14 Sobic.004G204400 OsFBX309 - F-box domain containing protein, expressed -
15 Sobic.010G077600 gb protein, putative, expressed -
16 Sobic.003G424400 Spotted leaf protein(PubMedID : 24906815)@armadillo repeat-containing protein, putative, expressed K08332: vacuolar protein 8
17 Sobic.001G485400 "BG1(Ortholog in rice:Liu et al., 2015)"(PubMedID : 31659849)@expressed protein -
18 Sobic.002G355500 C2 domain containing protein, putative, expressed -
19 Sobic.001G479800 glycosyl transferase, putative, expressed -
20 Sobic.003G376700 glycosyl transferase, putative, expressed -


Gene co-expression network
sample Sobic001G074400 Sobic001G074400 Sobic002G348000 Sobic002G348000 Sobic001G074400--Sobic002G348000 Sobic001G420700 Sobic001G420700 Sobic001G074400--Sobic001G420700 Sobic004G053300 Sobic004G053300 Sobic001G074400--Sobic004G053300 Sobic002G205900 Sobic002G205900 Sobic001G074400--Sobic002G205900 Sobic005G046100 Sobic005G046100 Sobic001G074400--Sobic005G046100 Sobic004G201300 Sobic004G201300 Sobic001G074400--Sobic004G201300 Sobic003G356200 Sobic003G356200 Sobic001G074400--Sobic003G356200 Sobic009G013100 Sobic009G013100 Sobic001G074400--Sobic009G013100 Sobic009G230700 Sobic009G230700 Sobic001G074400--Sobic009G230700 Sobic002G348000--Sobic003G356200 Sobic002G272600 Sobic002G272600 Sobic002G348000--Sobic002G272600 Sobic004G349100 Sobic004G349100 Sobic002G348000--Sobic004G349100 Sobic001G350501 Sobic001G350501 Sobic002G348000--Sobic001G350501 Sobic009G164900 Sobic009G164900 Sobic002G348000--Sobic009G164900 Sobic010G224900 Sobic010G224900 Sobic002G348000--Sobic010G224900 Sobic003G024800 Sobic003G024800 Sobic002G348000--Sobic003G024800 Sobic008G142700 Sobic008G142700 Sobic002G348000--Sobic008G142700 Sobic001G427800 Sobic001G427800 Sobic002G348000--Sobic001G427800 Sobic001G420700--Sobic005G046100 Sobic008G188700 Sobic008G188700 Sobic001G420700--Sobic008G188700 Sobic007G136700 Sobic007G136700 Sobic001G420700--Sobic007G136700 Sobic001G441600 Sobic001G441600 Sobic001G420700--Sobic001G441600 Sobic003G116700 Sobic003G116700 Sobic001G420700--Sobic003G116700 Sobic004G150400 Sobic004G150400 Sobic001G420700--Sobic004G150400 Sobic003G424400 Sobic003G424400 Sobic001G420700--Sobic003G424400 Sobic003G317200 Sobic003G317200 Sobic001G420700--Sobic003G317200 Sobic001G069800 Sobic001G069800 Sobic001G420700--Sobic001G069800 Sobic003G277900 Sobic003G277900 Sobic004G053300--Sobic003G277900 Sobic008G000800 Sobic008G000800 Sobic004G053300--Sobic008G000800 Sobic005G159600 Sobic005G159600 Sobic004G053300--Sobic005G159600 Sobic008G099500 Sobic008G099500 Sobic004G053300--Sobic008G099500 Sobic001G494100 Sobic001G494100 Sobic004G053300--Sobic001G494100 Sobic003G445900 Sobic003G445900 Sobic004G053300--Sobic003G445900 Sobic004G227500 Sobic004G227500 Sobic004G053300--Sobic004G227500 Sobic004G054200 Sobic004G054200 Sobic004G053300--Sobic004G054200 Sobic008G086200 Sobic008G086200 Sobic004G053300--Sobic008G086200 Sobic003G161700 Sobic003G161700 Sobic002G205900--Sobic003G161700 Sobic009G157500 Sobic009G157500 Sobic002G205900--Sobic009G157500 Sobic001G262900 Sobic001G262900 Sobic002G205900--Sobic001G262900 Sobic007G037301 Sobic007G037301 Sobic002G205900--Sobic007G037301 Sobic002G205900--Sobic008G000800 Sobic002G224450 Sobic002G224450 Sobic002G205900--Sobic002G224450 Sobic003G429500 Sobic003G429500 Sobic002G205900--Sobic003G429500 Sobic006G068400 Sobic006G068400 Sobic002G205900--Sobic006G068400 Sobic004G121000 Sobic004G121000 Sobic002G205900--Sobic004G121000 Sobic005G167300 Sobic005G167300 Sobic005G046100--Sobic005G167300 Sobic005G046100--Sobic004G150400 Sobic005G046100--Sobic001G420700 Sobic006G109300 Sobic006G109300 Sobic005G046100--Sobic006G109300 Sobic004G198000 Sobic004G198000 Sobic005G046100--Sobic004G198000 Sobic010G055500 Sobic010G055500 Sobic005G046100--Sobic010G055500 Sobic009G137800 Sobic009G137800 Sobic005G046100--Sobic009G137800 Sobic001G290200 Sobic001G290200 Sobic005G046100--Sobic001G290200 Sobic003G026300 Sobic003G026300 Sobic005G046100--Sobic003G026300 Sobic001G078300 Sobic001G078300 Sobic004G201300--Sobic001G078300 Sobic007G060900 Sobic007G060900 Sobic004G201300--Sobic007G060900 Sobic008G106600 Sobic008G106600 Sobic004G201300--Sobic008G106600 Sobic004G201300--Sobic001G074400 Sobic010G166700 Sobic010G166700 Sobic004G201300--Sobic010G166700 Sobic001G261537 Sobic001G261537 Sobic004G201300--Sobic001G261537 Sobic008G109100 Sobic008G109100 Sobic004G201300--Sobic008G109100 Sobic005G064700 Sobic005G064700 Sobic004G201300--Sobic005G064700 Sobic001G542800 Sobic001G542800 Sobic004G201300--Sobic001G542800 Sobic003G356200--Sobic009G164900 Sobic003G356200--Sobic001G350501 Sobic003G356200--Sobic002G348000 Sobic007G063200 Sobic007G063200 Sobic003G356200--Sobic007G063200 Sobic003G356200--Sobic003G026300 Sobic003G380500 Sobic003G380500 Sobic003G356200--Sobic003G380500 Sobic003G346000 Sobic003G346000 Sobic003G356200--Sobic003G346000 Sobic003G356200--Sobic006G109300 Sobic004G229100 Sobic004G229100 Sobic003G356200--Sobic004G229100 Sobic002G316500 Sobic002G316500 Sobic009G013100--Sobic002G316500 Sobic005G099150 Sobic005G099150 Sobic009G013100--Sobic005G099150 Sobic010G139301 Sobic010G139301 Sobic009G013100--Sobic010G139301 Sobic009G013100--Sobic008G000800 Sobic002G182300 Sobic002G182300 Sobic009G013100--Sobic002G182300 Sobic010G229000 Sobic010G229000 Sobic009G013100--Sobic010G229000 Sobic009G013100--Sobic006G068400 Sobic009G013100--Sobic004G227500 Sobic003G323900 Sobic003G323900 Sobic009G013100--Sobic003G323900 Sobic009G134600 Sobic009G134600 Sobic009G230700--Sobic009G134600 Sobic003G119800 Sobic003G119800 Sobic009G230700--Sobic003G119800 Sobic009G230700--Sobic003G424400 Sobic009G230700--Sobic003G317200 Sobic002G330300 Sobic002G330300 Sobic009G230700--Sobic002G330300 Sobic004G347900 Sobic004G347900 Sobic009G230700--Sobic004G347900 Sobic003G056500 Sobic003G056500 Sobic009G230700--Sobic003G056500 Sobic009G230700--Sobic005G046100 Sobic002G119800 Sobic002G119800 Sobic009G230700--Sobic002G119800
Octagon: transcription factors


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