Gene annotation
Transcriptome id Sobic.001G212100.1
Synonym Sb01g018750
Functional annotation GEM, putative, expressed
UniProt C5WXH1
Pfam PF02893
Panther DB PTHR31969 PTHR31969:SF14
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G23370 : GRAM domain-containing protein / ABA-responsive protein-related
RAP-DB (Rice) LOC_Os10g34730.1 : GEM, putative, expressed
MaizeGDB (Corn) Zm00025a040989 , Zm00025a047765 , Zm00025a047766 , Zm00025a017509 , Zm00025a006520 , Zm00025a013450
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G184900 OsDegp8 - Putative Deg protease homologue, expressed -
2 Sobic.009G210000 ATP-dependent Clp protease ATP-binding subunit clpX, putative, expressed K03544: clpX, ATP-dependent Clp protease ATP-binding subunit ClpX
3 Sobic.002G331100 peptide chain release factor protein, putative, expressed K02836: peptide chain release factor 2
4 Sobic.003G395600 CorA-like magnesium transporter protein, putative, expressed K16075: MRS2, magnesium transporter
5 Sobic.003G115000 - -
6 Sobic.010G219600 protein kinase domain containing protein, expressed -
7 Sobic.001G472666 - -
8 Sobic.005G119001 - -
9 Sobic.005G086250 - -
10 Sobic.003G334200 pentatricopeptide, putative, expressed -
11 Sobic.010G219900 expressed protein -
12 Sobic.001G215700 - -
13 Sobic.004G030200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
14 Sobic.006G204600 pentatricopeptide, putative, expressed -
15 Sobic.003G080000 Ser/Thr protein kinase, putative, expressed -
16 Sobic.009G054900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@relA-SpoT like protein RSH4, putative, expressed -
17 Sobic.003G017100 ABC transporter, ATP-binding protein, putative, expressed -
18 Sobic.001G270900 expressed protein -
19 Sobic.001G002700 Ser/Thr protein phosphatase family protein, putative, expressed K06269: serine/threonine-protein phosphatase PP1 catalytic subunit
20 Sobic.003G391200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@OTU-like cysteine protease family protein, putative, expressed -


Gene co-expression network
sample Sobic001G212100 Sobic001G212100 Sobic009G184900 Sobic009G184900 Sobic001G212100--Sobic009G184900 Sobic009G210000 Sobic009G210000 Sobic001G212100--Sobic009G210000 Sobic002G331100 Sobic002G331100 Sobic001G212100--Sobic002G331100 Sobic003G395600 Sobic003G395600 Sobic001G212100--Sobic003G395600 Sobic003G115000 Sobic003G115000 Sobic001G212100--Sobic003G115000 Sobic010G219600 Sobic010G219600 Sobic001G212100--Sobic010G219600 Sobic001G472666 Sobic001G472666 Sobic001G212100--Sobic001G472666 Sobic005G119001 Sobic005G119001 Sobic001G212100--Sobic005G119001 Sobic005G086250 Sobic005G086250 Sobic001G212100--Sobic005G086250 Sobic009G184900--Sobic009G210000 Sobic007G020500 Sobic007G020500 Sobic009G184900--Sobic007G020500 Sobic009G184900--Sobic005G086250 Sobic001G359900 Sobic001G359900 Sobic009G184900--Sobic001G359900 Sobic003G334200 Sobic003G334200 Sobic009G184900--Sobic003G334200 Sobic003G290800 Sobic003G290800 Sobic009G184900--Sobic003G290800 Sobic007G202900 Sobic007G202900 Sobic009G184900--Sobic007G202900 Sobic009G008400 Sobic009G008400 Sobic009G184900--Sobic009G008400 Sobic007G116200 Sobic007G116200 Sobic009G184900--Sobic007G116200 Sobic009G210000--Sobic009G184900 Sobic004G253050 Sobic004G253050 Sobic009G210000--Sobic004G253050 Sobic009G210000--Sobic007G116200 Sobic003G262200 Sobic003G262200 Sobic009G210000--Sobic003G262200 Sobic009G210000--Sobic001G359900 Sobic004G359800 Sobic004G359800 Sobic009G210000--Sobic004G359800 Sobic001G204000 Sobic001G204000 Sobic009G210000--Sobic001G204000 Sobic009G210000--Sobic010G219600 Sobic005G149200 Sobic005G149200 Sobic009G210000--Sobic005G149200 Sobic006G204600 Sobic006G204600 Sobic002G331100--Sobic006G204600 Sobic001G410700 Sobic001G410700 Sobic002G331100--Sobic001G410700 Sobic001G016100 Sobic001G016100 Sobic002G331100--Sobic001G016100 Sobic001G001300 Sobic001G001300 Sobic002G331100--Sobic001G001300 Sobic010G002000 Sobic010G002000 Sobic002G331100--Sobic010G002000 Sobic002G199000 Sobic002G199000 Sobic002G331100--Sobic002G199000 Sobic009G121000 Sobic009G121000 Sobic002G331100--Sobic009G121000 Sobic006G280800 Sobic006G280800 Sobic002G331100--Sobic006G280800 Sobic001G016201 Sobic001G016201 Sobic002G331100--Sobic001G016201 Sobic003G301400 Sobic003G301400 Sobic003G395600--Sobic003G301400 Sobic002G284600 Sobic002G284600 Sobic003G395600--Sobic002G284600 Sobic008G083600 Sobic008G083600 Sobic003G395600--Sobic008G083600 Sobic001G215700 Sobic001G215700 Sobic003G395600--Sobic001G215700 Sobic007G177700 Sobic007G177700 Sobic003G395600--Sobic007G177700 Sobic003G009501 Sobic003G009501 Sobic003G395600--Sobic003G009501 Sobic010G056100 Sobic010G056100 Sobic003G395600--Sobic010G056100 Sobic010G195100 Sobic010G195100 Sobic003G395600--Sobic010G195100 Sobic004G128100 Sobic004G128100 Sobic003G395600--Sobic004G128100 Sobic004G219400 Sobic004G219400 Sobic003G115000--Sobic004G219400 Sobic002G006600 Sobic002G006600 Sobic003G115000--Sobic002G006600 Sobic007G226600 Sobic007G226600 Sobic003G115000--Sobic007G226600 Sobic003G136900 Sobic003G136900 Sobic003G115000--Sobic003G136900 Sobic003G017100 Sobic003G017100 Sobic003G115000--Sobic003G017100 Sobic005G045000 Sobic005G045000 Sobic003G115000--Sobic005G045000 Sobic008G026900 Sobic008G026900 Sobic003G115000--Sobic008G026900 Sobic003G115000--Sobic001G016201 Sobic003G115000--Sobic009G184900 Sobic004G356400 Sobic004G356400 Sobic010G219600--Sobic004G356400 Sobic005G101200 Sobic005G101200 Sobic010G219600--Sobic005G101200 Sobic008G130000 Sobic008G130000 Sobic010G219600--Sobic008G130000 Sobic006G093800 Sobic006G093800 Sobic010G219600--Sobic006G093800 Sobic010G251700 Sobic010G251700 Sobic010G219600--Sobic010G251700 Sobic010G085100 Sobic010G085100 Sobic010G219600--Sobic010G085100 Sobic003G021100 Sobic003G021100 Sobic010G219600--Sobic003G021100 Sobic004G347800 Sobic004G347800 Sobic010G219600--Sobic004G347800 Sobic004G027600 Sobic004G027600 Sobic010G219600--Sobic004G027600 Sobic001G472666--Sobic003G301400 Sobic003G265900 Sobic003G265900 Sobic001G472666--Sobic003G265900 Sobic004G073100 Sobic004G073100 Sobic001G472666--Sobic004G073100 Sobic003G041000 Sobic003G041000 Sobic001G472666--Sobic003G041000 Sobic001G472666--Sobic003G395600 Sobic001G086600 Sobic001G086600 Sobic001G472666--Sobic001G086600 Sobic006G082600 Sobic006G082600 Sobic001G472666--Sobic006G082600 Sobic001G472666--Sobic010G195100 Sobic004G099800 Sobic004G099800 Sobic001G472666--Sobic004G099800 Sobic005G119001--Sobic009G184900 Sobic001G002700 Sobic001G002700 Sobic005G119001--Sobic001G002700 Sobic005G119001--Sobic005G086250 Sobic001G291400 Sobic001G291400 Sobic005G119001--Sobic001G291400 Sobic003G080000 Sobic003G080000 Sobic005G119001--Sobic003G080000 Sobic002G287400 Sobic002G287400 Sobic005G119001--Sobic002G287400 Sobic005G119001--Sobic001G212100 Sobic005G119001--Sobic003G115000 Sobic001G092250 Sobic001G092250 Sobic005G119001--Sobic001G092250 Sobic005G086250--Sobic009G184900 Sobic008G055300 Sobic008G055300 Sobic005G086250--Sobic008G055300 Sobic003G187300 Sobic003G187300 Sobic005G086250--Sobic003G187300 Sobic003G030500 Sobic003G030500 Sobic005G086250--Sobic003G030500 Sobic006G049200 Sobic006G049200 Sobic005G086250--Sobic006G049200 Sobic001G087800 Sobic001G087800 Sobic005G086250--Sobic001G087800 Sobic005G086250--Sobic003G334200 Sobic005G086250--Sobic003G301400 Sobic004G246000 Sobic004G246000 Sobic005G086250--Sobic004G246000
Octagon: transcription factors


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