Gene annotation
Transcriptome id Sobic.009G184900.1
Synonym Sb09g024450, DEG15
Functional annotation OsDegp8 - Putative Deg protease homologue, expressed
UniProt C5Z0C8
Pfam PF13365
Panther DB PTHR21004 PTHR21004:SF0
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G28320 : protease-related
RAP-DB (Rice) LOC_Os05g41810.1 : OsDegp8 - Putative Deg protease homologue, expressed
MaizeGDB (Corn) Zm00025a044112 , Zm00025a046574
Brachypodium PNT70994 , PNT70992 , PNT70993
Barley HORVU1Hr1G067000.12 , HORVU1Hr1G067000.13 , HORVU1Hr1G067000.10 , HORVU1Hr1G067000.11 , HORVU1Hr1G067000.18 , HORVU1Hr1G067000.19 , HORVU1Hr1G067000.16 , HORVU1Hr1G067000.17 , HORVU1Hr1G067000.14 , HORVU1Hr1G067000.15 , HORVU1Hr1G067000.1 , HORVU1Hr1G067000.2 , HORVU1Hr1G067000.3 , HORVU1Hr1G067000.4 , HORVU1Hr1G067000.5 , HORVU1Hr1G067000.6 , HORVU1Hr1G067000.7 , HORVU1Hr1G067000.8 , HORVU1Hr1G067000.9 , HORVU1Hr1G067000.23 , HORVU1Hr1G067000.22 , HORVU1Hr1G067000.21 , HORVU1Hr1G067000.20 , HORVU1Hr1G067000.27 , HORVU1Hr1G067000.26 , HORVU1Hr1G067000.25 , HORVU1Hr1G067000.24 , HORVU1Hr1G067000.28
Wheat TraesCS1A02G315600 , TraesCS1A02G315600 , TraesCS1B02G327500 , TraesCS1D02G315800
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G210000 ATP-dependent Clp protease ATP-binding subunit clpX, putative, expressed K03544: clpX, ATP-dependent Clp protease ATP-binding subunit ClpX
2 Sobic.007G020500 expressed protein K15198: BDP1, transcription factor TFIIIB component B''
3 Sobic.005G086250 - -
4 Sobic.001G359900 expressed protein -
5 Sobic.003G334200 pentatricopeptide, putative, expressed -
6 Sobic.003G290800 starch binding domain containing protein, putative, expressed -
7 Sobic.007G202900 ZOS8-09 - C2H2 zinc finger protein, expressed -
8 Sobic.009G008400 - -
9 Sobic.007G116200 expressed protein K13217: PRPF39, pre-mRNA-processing factor 39
10 Sobic.003G434800 PPR repeat domain containing protein, putative, expressed -
11 Sobic.009G149700 hydrolase, alpha/beta fold family domain containing protein, expressed -
12 Sobic.010G256700 MATE efflux family protein, putative, expressed K03327: TC.MATE, SLC47A, norM, mdtK, multidrug resistance protein, MATE family
13 Sobic.001G204000 expressed protein -
14 Sobic.004G027800 beta-amylase, putative, expressed -
15 Sobic.003G247300 protein of unknown function DUF1296 domain containing protein, expressed -
16 Sobic.010G232200 - -
17 Sobic.004G010151 - -
18 Sobic.002G409700 POLD1 - Putative DNA polymerase delta catalytic subunit, expressed K02350: REV3L, DNA polymerase zeta
19 Sobic.005G119001 - -
20 Sobic.001G212100 GEM, putative, expressed -


Gene co-expression network
sample Sobic009G184900 Sobic009G184900 Sobic009G210000 Sobic009G210000 Sobic009G184900--Sobic009G210000 Sobic007G020500 Sobic007G020500 Sobic009G184900--Sobic007G020500 Sobic005G086250 Sobic005G086250 Sobic009G184900--Sobic005G086250 Sobic001G359900 Sobic001G359900 Sobic009G184900--Sobic001G359900 Sobic003G334200 Sobic003G334200 Sobic009G184900--Sobic003G334200 Sobic003G290800 Sobic003G290800 Sobic009G184900--Sobic003G290800 Sobic007G202900 Sobic007G202900 Sobic009G184900--Sobic007G202900 Sobic009G008400 Sobic009G008400 Sobic009G184900--Sobic009G008400 Sobic007G116200 Sobic007G116200 Sobic009G184900--Sobic007G116200 Sobic009G210000--Sobic009G184900 Sobic004G253050 Sobic004G253050 Sobic009G210000--Sobic004G253050 Sobic009G210000--Sobic007G116200 Sobic003G262200 Sobic003G262200 Sobic009G210000--Sobic003G262200 Sobic009G210000--Sobic001G359900 Sobic004G359800 Sobic004G359800 Sobic009G210000--Sobic004G359800 Sobic001G204000 Sobic001G204000 Sobic009G210000--Sobic001G204000 Sobic010G219600 Sobic010G219600 Sobic009G210000--Sobic010G219600 Sobic005G149200 Sobic005G149200 Sobic009G210000--Sobic005G149200 Sobic002G169633 Sobic002G169633 Sobic007G020500--Sobic002G169633 Sobic007G020500--Sobic007G202900 Sobic001G072500 Sobic001G072500 Sobic007G020500--Sobic001G072500 Sobic002G173000 Sobic002G173000 Sobic007G020500--Sobic002G173000 Sobic004G314000 Sobic004G314000 Sobic007G020500--Sobic004G314000 Sobic002G161900 Sobic002G161900 Sobic007G020500--Sobic002G161900 Sobic003G280800 Sobic003G280800 Sobic007G020500--Sobic003G280800 Sobic007G020500--Sobic004G359800 Sobic010G139000 Sobic010G139000 Sobic007G020500--Sobic010G139000 Sobic005G086250--Sobic009G184900 Sobic008G055300 Sobic008G055300 Sobic005G086250--Sobic008G055300 Sobic003G187300 Sobic003G187300 Sobic005G086250--Sobic003G187300 Sobic003G030500 Sobic003G030500 Sobic005G086250--Sobic003G030500 Sobic006G049200 Sobic006G049200 Sobic005G086250--Sobic006G049200 Sobic001G087800 Sobic001G087800 Sobic005G086250--Sobic001G087800 Sobic005G086250--Sobic003G334200 Sobic003G301400 Sobic003G301400 Sobic005G086250--Sobic003G301400 Sobic004G246000 Sobic004G246000 Sobic005G086250--Sobic004G246000 Sobic010G277500 Sobic010G277500 Sobic001G359900--Sobic010G277500 Sobic003G161000 Sobic003G161000 Sobic001G359900--Sobic003G161000 Sobic003G332800 Sobic003G332800 Sobic001G359900--Sobic003G332800 Sobic010G129200 Sobic010G129200 Sobic001G359900--Sobic010G129200 Sobic003G176500 Sobic003G176500 Sobic001G359900--Sobic003G176500 Sobic005G013200 Sobic005G013200 Sobic001G359900--Sobic005G013200 Sobic006G079400 Sobic006G079400 Sobic001G359900--Sobic006G079400 Sobic004G299000 Sobic004G299000 Sobic001G359900--Sobic004G299000 Sobic003G174475 Sobic003G174475 Sobic001G359900--Sobic003G174475 Sobic003G334200--Sobic009G184900 Sobic003G334200--Sobic008G055300 Sobic003G334200--Sobic005G086250 Sobic003G334200--Sobic009G210000 Sobic003G334200--Sobic003G301400 Sobic010G232200 Sobic010G232200 Sobic003G334200--Sobic010G232200 Sobic009G184600 Sobic009G184600 Sobic003G334200--Sobic009G184600 Sobic003G434800 Sobic003G434800 Sobic003G334200--Sobic003G434800 Sobic009G149700 Sobic009G149700 Sobic003G334200--Sobic009G149700 Sobic007G185700 Sobic007G185700 Sobic003G290800--Sobic007G185700 Sobic002G118200 Sobic002G118200 Sobic003G290800--Sobic002G118200 Sobic001G261573 Sobic001G261573 Sobic003G290800--Sobic001G261573 Sobic005G118400 Sobic005G118400 Sobic003G290800--Sobic005G118400 Sobic001G530900 Sobic001G530900 Sobic003G290800--Sobic001G530900 Sobic010G153201 Sobic010G153201 Sobic003G290800--Sobic010G153201 Sobic002G231200 Sobic002G231200 Sobic003G290800--Sobic002G231200 Sobic003G290800--Sobic003G434800 Sobic003G146500 Sobic003G146500 Sobic003G290800--Sobic003G146500 Sobic007G202900--Sobic004G314000 Sobic007G202900--Sobic010G139000 Sobic002G397500 Sobic002G397500 Sobic007G202900--Sobic002G397500 Sobic005G008800 Sobic005G008800 Sobic007G202900--Sobic005G008800 Sobic005G112300 Sobic005G112300 Sobic007G202900--Sobic005G112300 Sobic002G309600 Sobic002G309600 Sobic007G202900--Sobic002G309600 Sobic001G280900 Sobic001G280900 Sobic007G202900--Sobic001G280900 Sobic010G206900 Sobic010G206900 Sobic007G202900--Sobic010G206900 Sobic008G009700 Sobic008G009700 Sobic007G202900--Sobic008G009700 Sobic010G112000 Sobic010G112000 Sobic009G008400--Sobic010G112000 Sobic001G178700 Sobic001G178700 Sobic009G008400--Sobic001G178700 Sobic007G161800 Sobic007G161800 Sobic009G008400--Sobic007G161800 Sobic006G131500 Sobic006G131500 Sobic009G008400--Sobic006G131500 Sobic001G016600 Sobic001G016600 Sobic009G008400--Sobic001G016600 Sobic009G008400--Sobic001G280900 Sobic001G498600 Sobic001G498600 Sobic009G008400--Sobic001G498600 Sobic001G235900 Sobic001G235900 Sobic009G008400--Sobic001G235900 Sobic001G248300 Sobic001G248300 Sobic009G008400--Sobic001G248300 Sobic006G216800 Sobic006G216800 Sobic007G116200--Sobic006G216800 Sobic010G010700 Sobic010G010700 Sobic007G116200--Sobic010G010700 Sobic002G134200 Sobic002G134200 Sobic007G116200--Sobic002G134200 Sobic006G182900 Sobic006G182900 Sobic007G116200--Sobic006G182900 Sobic007G116200--Sobic004G359800 Sobic007G116200--Sobic010G139000 Sobic010G256700 Sobic010G256700 Sobic007G116200--Sobic010G256700 Sobic004G209600 Sobic004G209600 Sobic007G116200--Sobic004G209600 Sobic007G116200--Sobic003G280800
Octagon: transcription factors


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