Gene annotation
Transcriptome id Sobic.007G202900.1,Sobic.007G202900.3,Sobic.007G202900.2
Synonym Sb07g027020, ATMBD8, MBD8
Functional annotation ZOS8-09 - C2H2 zinc finger protein, expressed
UniProt C5YIA9
Pfam PF01429
Panther DB PTHR15065:SF4 PTHR15065 PTHR15065 PTHR15065:SF4
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0003677; DNA binding GO:0005634nucleus GO:0005634nucleus GO:0003677DNA binding


Orthologs (automatic annotation)
TAIR AT1G22310 : methyl-CPG-binding domain 8
RAP-DB (Rice) LOC_Os08g37920.2 : ZOS8-09 - C2H2 zinc finger protein, expressed
MaizeGDB (Corn) Zm00025a033713 , Zm00025a004954
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G314000 expressed protein -
2 Sobic.010G139000 surp module family protein, putative, expressed K13123: G patch domain-containing protein 1
3 Sobic.002G397500 SAC3/GANP family protein, expressed -
4 Sobic.005G008800 WD domain and HEAT domain containing protein, putative, expressed K07204: regulatory associated protein of mTOR
5 Sobic.005G112300 ubiquitin carboxyl-terminal hydrolase 5, putative, expressed K11835: USP4_11, ubiquitin carboxyl-terminal hydrolase 4/11
6 Sobic.002G309600 DNA-binding protein, putative, expressed K14326: UPF1, regulator of nonsense transcripts 1
7 Sobic.001G280900 expressed protein -
8 Sobic.010G206900 transcription initiation factor TFIID subunit 1, putative, expressed K03125: transcription initiation factor TFIID subunit 1
9 Sobic.008G009700 WD domain and HEAT domain containing protein, putative, expressed K07204: regulatory associated protein of mTOR
10 Sobic.001G241200 protein kinase domain containing protein, expressed -
11 Sobic.002G134200 WD domain, G-beta repeat domain containing protein, expressed K11293: HIRA, protein HIRA/HIR1
12 Sobic.001G540400 expressed protein -
13 Sobic.001G002000 protein kinase domain containing protein, expressed -
14 Sobic.003G280800 RNA recognition motif family protein, expressed K13094: RNA-binding protein 5/10
15 Sobic.009G165700 SAC3/GANP family protein, putative, expressed -
16 Sobic.001G311500 N-acetylglucosaminyl transferase component, putative, expressed K03860: PIGQ, phosphatidylinositol N-acetylglucosaminyltransferase subunit Q
17 Sobic.001G474600 calmodulin-binding transcription activator, putative, expressed -
18 Sobic.003G408600 GYF domain containing protein, putative, expressed K18730: PERQ amino acid-rich with GYF domain-containing protein
19 Sobic.010G010700 PHD-finger family protein, expressed -
20 Sobic.004G034900 histone acetyltransferase HAC1, putative, expressed K04498: EP300, CREBBP, E1A/CREB-binding protein


Gene co-expression network
sample Sobic007G202900 Sobic007G202900 Sobic004G314000 Sobic004G314000 Sobic007G202900--Sobic004G314000 Sobic010G139000 Sobic010G139000 Sobic007G202900--Sobic010G139000 Sobic002G397500 Sobic002G397500 Sobic007G202900--Sobic002G397500 Sobic005G008800 Sobic005G008800 Sobic007G202900--Sobic005G008800 Sobic005G112300 Sobic005G112300 Sobic007G202900--Sobic005G112300 Sobic002G309600 Sobic002G309600 Sobic007G202900--Sobic002G309600 Sobic001G280900 Sobic001G280900 Sobic007G202900--Sobic001G280900 Sobic010G206900 Sobic010G206900 Sobic007G202900--Sobic010G206900 Sobic008G009700 Sobic008G009700 Sobic007G202900--Sobic008G009700 Sobic004G314000--Sobic010G139000 Sobic004G314000--Sobic005G008800 Sobic004G314000--Sobic005G112300 Sobic010G279450 Sobic010G279450 Sobic004G314000--Sobic010G279450 Sobic004G242400 Sobic004G242400 Sobic004G314000--Sobic004G242400 Sobic004G314000--Sobic010G206900 Sobic003G401600 Sobic003G401600 Sobic004G314000--Sobic003G401600 Sobic004G314000--Sobic002G309600 Sobic009G040600 Sobic009G040600 Sobic004G314000--Sobic009G040600 Sobic010G139000--Sobic004G314000 Sobic010G139000--Sobic005G112300 Sobic010G139000--Sobic010G279450 Sobic010G139000--Sobic010G206900 Sobic001G311500 Sobic001G311500 Sobic010G139000--Sobic001G311500 Sobic001G036050 Sobic001G036050 Sobic010G139000--Sobic001G036050 Sobic010G112100 Sobic010G112100 Sobic010G139000--Sobic010G112100 Sobic010G010700 Sobic010G010700 Sobic010G139000--Sobic010G010700 Sobic010G139000--Sobic005G008800 Sobic003G408600 Sobic003G408600 Sobic002G397500--Sobic003G408600 Sobic007G062800 Sobic007G062800 Sobic002G397500--Sobic007G062800 Sobic002G397500--Sobic005G112300 Sobic001G540400 Sobic001G540400 Sobic002G397500--Sobic001G540400 Sobic009G109200 Sobic009G109200 Sobic002G397500--Sobic009G109200 Sobic003G072200 Sobic003G072200 Sobic002G397500--Sobic003G072200 Sobic002G397500--Sobic004G242400 Sobic004G276400 Sobic004G276400 Sobic002G397500--Sobic004G276400 Sobic002G397500--Sobic010G112100 Sobic005G008800--Sobic001G540400 Sobic005G008800--Sobic003G408600 Sobic005G008800--Sobic005G112300 Sobic005G008800--Sobic007G062800 Sobic001G289600 Sobic001G289600 Sobic005G008800--Sobic001G289600 Sobic005G008800--Sobic004G314000 Sobic005G008800--Sobic008G009700 Sobic001G289800 Sobic001G289800 Sobic005G008800--Sobic001G289800 Sobic005G008800--Sobic009G109200 Sobic001G363500 Sobic001G363500 Sobic005G112300--Sobic001G363500 Sobic005G112300--Sobic007G062800 Sobic005G112300--Sobic010G112100 Sobic005G112300--Sobic010G139000 Sobic007G105100 Sobic007G105100 Sobic005G112300--Sobic007G105100 Sobic005G112300--Sobic001G540400 Sobic005G112300--Sobic010G010700 Sobic005G112300--Sobic005G008800 Sobic002G071500 Sobic002G071500 Sobic005G112300--Sobic002G071500 Sobic003G280800 Sobic003G280800 Sobic002G309600--Sobic003G280800 Sobic002G134200 Sobic002G134200 Sobic002G309600--Sobic002G134200 Sobic007G117400 Sobic007G117400 Sobic002G309600--Sobic007G117400 Sobic002G309600--Sobic008G009700 Sobic001G071400 Sobic001G071400 Sobic002G309600--Sobic001G071400 Sobic002G309600--Sobic005G112300 Sobic004G065100 Sobic004G065100 Sobic002G309600--Sobic004G065100 Sobic001G154900 Sobic001G154900 Sobic002G309600--Sobic001G154900 Sobic002G006900 Sobic002G006900 Sobic002G309600--Sobic002G006900 Sobic001G280900--Sobic001G540400 Sobic001G280900--Sobic005G112300 Sobic001G280900--Sobic002G397500 Sobic001G280900--Sobic003G408600 Sobic001G280900--Sobic009G109200 Sobic001G280900--Sobic005G008800 Sobic001G280900--Sobic007G062800 Sobic001G058700 Sobic001G058700 Sobic001G280900--Sobic001G058700 Sobic001G050600 Sobic001G050600 Sobic001G280900--Sobic001G050600 Sobic010G206900--Sobic010G010700 Sobic001G365900 Sobic001G365900 Sobic010G206900--Sobic001G365900 Sobic004G034900 Sobic004G034900 Sobic010G206900--Sobic004G034900 Sobic001G534700 Sobic001G534700 Sobic010G206900--Sobic001G534700 Sobic010G247800 Sobic010G247800 Sobic010G206900--Sobic010G247800 Sobic002G411600 Sobic002G411600 Sobic010G206900--Sobic002G411600 Sobic008G001200 Sobic008G001200 Sobic010G206900--Sobic008G001200 Sobic003G196300 Sobic003G196300 Sobic010G206900--Sobic003G196300 Sobic009G165700 Sobic009G165700 Sobic010G206900--Sobic009G165700 Sobic008G009700--Sobic002G309600 Sobic008G009700--Sobic005G008800 Sobic008G009700--Sobic005G112300 Sobic007G065400 Sobic007G065400 Sobic008G009700--Sobic007G065400 Sobic008G009700--Sobic002G071500 Sobic010G002100 Sobic010G002100 Sobic008G009700--Sobic010G002100 Sobic002G153700 Sobic002G153700 Sobic008G009700--Sobic002G153700 Sobic010G065300 Sobic010G065300 Sobic008G009700--Sobic010G065300 Sobic001G241200 Sobic001G241200 Sobic008G009700--Sobic001G241200
Octagon: transcription factors


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