Gene annotation
Transcriptome id Sobic.001G253800.1
Synonym
Functional annotation -
UniProt A0A1B6QKX6
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G165000 B3 DNA binding domain containing protein -
2 Sobic.001G262100 expressed protein -
3 Sobic.010G243700 - -
4 Sobic.001G262200 expressed protein -
5 Sobic.010G243600 - -
6 Sobic.004G032100 expressed protein -
7 Sobic.008G139000 expressed protein -
8 Sobic.004G096801 - -
9 Sobic.006G200800 phosphoribulokinase/Uridine kinase family protein, expressed K00855: PRK, phosphoribulokinase
10 Sobic.010G059200 cystathionine gamma-synthase, putative, expressed K01760: cysteine-S-conjugate beta-lyase
11 Sobic.008G131500 ulp1 protease family, C-terminal catalytic domain containing protein, expressed -
12 Sobic.006G280500 phosphate/phosphate translocator, putative, expressed -
13 Sobic.008G088809 - -
14 Sobic.004G099300 transporter family protein, putative, expressed -
15 Sobic.003G167900 oxidoreductase, 2OG-Fe oxygenase family protein, putative, expressed -
16 Sobic.010G188600 stromal membrane-associated protein, putative, expressed K12486: stromal membrane-associated protein
17 Sobic.010G236300 "domain confirmed by Pfam database, expressed in root, expression induced BR treatment"(PubMedID : 20499123)@auxin response factor 18, putative, expressed -
18 Sobic.002G083900 RNA recognition motif containing protein, putative, expressed K12881: THOC4, THO complex subunit 4
19 Sobic.009G093900 rhodanese-like domain containing protein, putative, expressed -
20 Sobic.004G343900 expressed protein -


Gene co-expression network
sample Sobic001G253800 Sobic001G253800 Sobic001G165000 Sobic001G165000 Sobic001G253800--Sobic001G165000 Sobic001G262100 Sobic001G262100 Sobic001G253800--Sobic001G262100 Sobic010G243700 Sobic010G243700 Sobic001G253800--Sobic010G243700 Sobic001G262200 Sobic001G262200 Sobic001G253800--Sobic001G262200 Sobic010G243600 Sobic010G243600 Sobic001G253800--Sobic010G243600 Sobic004G032100 Sobic004G032100 Sobic001G253800--Sobic004G032100 Sobic008G139000 Sobic008G139000 Sobic001G253800--Sobic008G139000 Sobic004G096801 Sobic004G096801 Sobic001G253800--Sobic004G096801 Sobic006G200800 Sobic006G200800 Sobic001G253800--Sobic006G200800 Sobic001G165000--Sobic001G253800 Sobic004G072200 Sobic004G072200 Sobic001G165000--Sobic004G072200 Sobic010G038100 Sobic010G038100 Sobic001G165000--Sobic010G038100 Sobic008G014801 Sobic008G014801 Sobic001G165000--Sobic008G014801 Sobic001G286500 Sobic001G286500 Sobic001G165000--Sobic001G286500 Sobic001G172200 Sobic001G172200 Sobic001G165000--Sobic001G172200 Sobic009G024400 Sobic009G024400 Sobic001G165000--Sobic009G024400 Sobic002G302900 Sobic002G302900 Sobic001G165000--Sobic002G302900 Sobic002G344000 Sobic002G344000 Sobic001G165000--Sobic002G344000 Sobic001G262100--Sobic001G262200 Sobic001G262100--Sobic001G253800 Sobic003G385401 Sobic003G385401 Sobic001G262100--Sobic003G385401 Sobic002G073700 Sobic002G073700 Sobic001G262100--Sobic002G073700 Sobic008G121240 Sobic008G121240 Sobic001G262100--Sobic008G121240 Sobic001G091100 Sobic001G091100 Sobic001G262100--Sobic001G091100 Sobic010G142700 Sobic010G142700 Sobic001G262100--Sobic010G142700 Sobic001G262800 Sobic001G262800 Sobic001G262100--Sobic001G262800 Sobic005G163866 Sobic005G163866 Sobic001G262100--Sobic005G163866 Sobic010G243700--Sobic010G243600 Sobic010G243700--Sobic001G253800 Sobic010G059200 Sobic010G059200 Sobic010G243700--Sobic010G059200 Sobic010G154500 Sobic010G154500 Sobic010G243700--Sobic010G154500 Sobic001G408800 Sobic001G408800 Sobic010G243700--Sobic001G408800 Sobic006G002400 Sobic006G002400 Sobic010G243700--Sobic006G002400 Sobic001G462200 Sobic001G462200 Sobic010G243700--Sobic001G462200 Sobic003G165800 Sobic003G165800 Sobic010G243700--Sobic003G165800 Sobic002G125800 Sobic002G125800 Sobic010G243700--Sobic002G125800 Sobic001G262200--Sobic001G262100 Sobic003G439900 Sobic003G439900 Sobic001G262200--Sobic003G439900 Sobic001G262200--Sobic001G262800 Sobic001G262200--Sobic008G121240 Sobic005G065200 Sobic005G065200 Sobic001G262200--Sobic005G065200 Sobic003G351401 Sobic003G351401 Sobic001G262200--Sobic003G351401 Sobic001G262200--Sobic001G091100 Sobic001G262200--Sobic001G253800 Sobic001G260300 Sobic001G260300 Sobic001G262200--Sobic001G260300 Sobic010G243600--Sobic010G243700 Sobic010G060166 Sobic010G060166 Sobic010G243600--Sobic010G060166 Sobic010G243600--Sobic010G154500 Sobic010G243600--Sobic001G260300 Sobic001G312400 Sobic001G312400 Sobic010G243600--Sobic001G312400 Sobic003G008900 Sobic003G008900 Sobic010G243600--Sobic003G008900 Sobic010G243600--Sobic006G200800 Sobic010G094301 Sobic010G094301 Sobic010G243600--Sobic010G094301 Sobic004G132600 Sobic004G132600 Sobic010G243600--Sobic004G132600 Sobic009G005400 Sobic009G005400 Sobic004G032100--Sobic009G005400 Sobic002G305100 Sobic002G305100 Sobic004G032100--Sobic002G305100 Sobic009G124000 Sobic009G124000 Sobic004G032100--Sobic009G124000 Sobic009G045900 Sobic009G045900 Sobic004G032100--Sobic009G045900 Sobic006G208400 Sobic006G208400 Sobic004G032100--Sobic006G208400 Sobic008G157200 Sobic008G157200 Sobic004G032100--Sobic008G157200 Sobic006G275000 Sobic006G275000 Sobic004G032100--Sobic006G275000 Sobic004G032100--Sobic010G059200 Sobic010G134500 Sobic010G134500 Sobic004G032100--Sobic010G134500 Sobic001G195800 Sobic001G195800 Sobic008G139000--Sobic001G195800 Sobic006G155700 Sobic006G155700 Sobic008G139000--Sobic006G155700 Sobic009G083300 Sobic009G083300 Sobic008G139000--Sobic009G083300 Sobic010G093500 Sobic010G093500 Sobic008G139000--Sobic010G093500 Sobic001G217200 Sobic001G217200 Sobic008G139000--Sobic001G217200 Sobic008G105850 Sobic008G105850 Sobic008G139000--Sobic008G105850 Sobic001G448700 Sobic001G448700 Sobic008G139000--Sobic001G448700 Sobic006G125800 Sobic006G125800 Sobic008G139000--Sobic006G125800 Sobic006G054300 Sobic006G054300 Sobic008G139000--Sobic006G054300 Sobic005G184050 Sobic005G184050 Sobic004G096801--Sobic005G184050 Sobic004G096801--Sobic005G163866 Sobic009G029001 Sobic009G029001 Sobic004G096801--Sobic009G029001 Sobic004G096801--Sobic005G065200 Sobic007G181300 Sobic007G181300 Sobic004G096801--Sobic007G181300 Sobic002G128900 Sobic002G128900 Sobic004G096801--Sobic002G128900 Sobic002G279700 Sobic002G279700 Sobic004G096801--Sobic002G279700 Sobic008G006200 Sobic008G006200 Sobic004G096801--Sobic008G006200 Sobic005G183400 Sobic005G183400 Sobic004G096801--Sobic005G183400 Sobic008G019100 Sobic008G019100 Sobic006G200800--Sobic008G019100 Sobic008G021300 Sobic008G021300 Sobic006G200800--Sobic008G021300 Sobic006G200800--Sobic006G054300 Sobic001G192100 Sobic001G192100 Sobic006G200800--Sobic001G192100 Sobic004G274100 Sobic004G274100 Sobic006G200800--Sobic004G274100 Sobic001G010100 Sobic001G010100 Sobic006G200800--Sobic001G010100 Sobic004G343900 Sobic004G343900 Sobic006G200800--Sobic004G343900 Sobic003G132100 Sobic003G132100 Sobic006G200800--Sobic003G132100 Sobic001G527000 Sobic001G527000 Sobic006G200800--Sobic001G527000
Octagon: transcription factors


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