Gene annotation
Transcriptome id Sobic.001G261513.1
Synonym -
Functional annotation -
UniProt A0A109NDZ5 , C6JRU5
Pfam PF04504
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os09g01310.1 : expressed protein
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G013500 DNA-directed RNA polymerases I, II, and III subunit RPABC3, putative, expressed K03016: RPB8, DNA-directed RNA polymerases I, II, and III subunit RPABC3
2 Sobic.008G004000 ribosomal protein L10, putative, expressed K14815: mRNA turnover protein 4
3 Sobic.002G345300 ZOS7-05 - C2H2 zinc finger protein, expressed -
4 Sobic.010G277800 lysM domain containing protein, putative, expressed -
5 Sobic.004G310300 phosphate carrier protein, mitochondrial precursor, putative, expressed K15102: SLC25A3, PHC, solute carrier family 25 (mitochondrial phosphate transporter), member 3
6 Sobic.003G386000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@kinase, pfkB family, putative, expressed K00847: E2.7.1.4, fructokinase
7 Sobic.003G253000 ubiquitin-conjugating enzyme, putative, expressed K10580: UBE2N, BLU, ubiquitin-conjugating enzyme E2 N
8 Sobic.007G216300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@heat shock protein, putative, expressed K04079: HSP90A, molecular chaperone HtpG
9 Sobic.001G415500 zinc finger, C3HC4 type domain containing protein, expressed K13125: nitric oxide synthase-interacting protein
10 Sobic.003G329800 BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative, expressed -
11 Sobic.003G368500 Yip1 domain containing protein, expressed -
12 Sobic.003G130800 pyruvate kinase, putative, expressed K00873: PK, pyruvate kinase
13 Sobic.010G173100 elongation factor 1-gamma, putative, expressed K03233: elongation factor 1-gamma
14 Sobic.001G034100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@protein phosphatase 2C, putative, expressed -
15 Sobic.010G163600 ras-related protein, putative, expressed K07904: Ras-related protein Rab-11A
16 Sobic.001G281400 expressed protein -
17 Sobic.003G248600 26S protease regulatory subunit 7, putative, expressed K03061: PSMC2, 26S proteasome regulatory subunit T1
18 Sobic.004G321900 26S protease regulatory subunit 7, putative, expressed K03061: PSMC2, 26S proteasome regulatory subunit T1
19 Sobic.004G020000 translation initiation factor eIF3 subunit, putative, expressed K03245: translation initiation factor 3 subunit J
20 Sobic.010G186200 OsFBL30 - F-box domain and LRR containing protein, expressed K14515: EIN3-binding F-box protein


Gene co-expression network
sample Sobic001G261513 Sobic001G261513 Sobic001G013500 Sobic001G013500 Sobic001G261513--Sobic001G013500 Sobic008G004000 Sobic008G004000 Sobic001G261513--Sobic008G004000 Sobic002G345300 Sobic002G345300 Sobic001G261513--Sobic002G345300 Sobic010G277800 Sobic010G277800 Sobic001G261513--Sobic010G277800 Sobic004G310300 Sobic004G310300 Sobic001G261513--Sobic004G310300 Sobic003G386000 Sobic003G386000 Sobic001G261513--Sobic003G386000 Sobic003G253000 Sobic003G253000 Sobic001G261513--Sobic003G253000 Sobic007G216300 Sobic007G216300 Sobic001G261513--Sobic007G216300 Sobic001G415500 Sobic001G415500 Sobic001G261513--Sobic001G415500 Sobic001G106700 Sobic001G106700 Sobic001G013500--Sobic001G106700 Sobic009G257600 Sobic009G257600 Sobic001G013500--Sobic009G257600 Sobic001G460600 Sobic001G460600 Sobic001G013500--Sobic001G460600 Sobic002G166900 Sobic002G166900 Sobic001G013500--Sobic002G166900 Sobic004G067100 Sobic004G067100 Sobic001G013500--Sobic004G067100 Sobic001G219300 Sobic001G219300 Sobic001G013500--Sobic001G219300 Sobic009G225000 Sobic009G225000 Sobic001G013500--Sobic009G225000 Sobic001G461900 Sobic001G461900 Sobic001G013500--Sobic001G461900 Sobic001G013500--Sobic010G277800 Sobic005G003800 Sobic005G003800 Sobic008G004000--Sobic005G003800 Sobic009G232000 Sobic009G232000 Sobic008G004000--Sobic009G232000 Sobic009G190300 Sobic009G190300 Sobic008G004000--Sobic009G190300 Sobic009G065400 Sobic009G065400 Sobic008G004000--Sobic009G065400 Sobic001G018800 Sobic001G018800 Sobic008G004000--Sobic001G018800 Sobic001G011200 Sobic001G011200 Sobic008G004000--Sobic001G011200 Sobic001G216200 Sobic001G216200 Sobic008G004000--Sobic001G216200 Sobic010G100000 Sobic010G100000 Sobic008G004000--Sobic010G100000 Sobic002G364500 Sobic002G364500 Sobic008G004000--Sobic002G364500 Sobic002G046100 Sobic002G046100 Sobic002G345300--Sobic002G046100 Sobic003G350300 Sobic003G350300 Sobic002G345300--Sobic003G350300 Sobic001G281400 Sobic001G281400 Sobic002G345300--Sobic001G281400 Sobic010G178200 Sobic010G178200 Sobic002G345300--Sobic010G178200 Sobic002G267500 Sobic002G267500 Sobic002G345300--Sobic002G267500 Sobic002G345300--Sobic003G253000 Sobic003G285800 Sobic003G285800 Sobic002G345300--Sobic003G285800 Sobic004G272800 Sobic004G272800 Sobic002G345300--Sobic004G272800 Sobic010G149300 Sobic010G149300 Sobic002G345300--Sobic010G149300 Sobic010G042100 Sobic010G042100 Sobic010G277800--Sobic010G042100 Sobic001G040800 Sobic001G040800 Sobic010G277800--Sobic001G040800 Sobic009G185800 Sobic009G185800 Sobic010G277800--Sobic009G185800 Sobic007G088000 Sobic007G088000 Sobic010G277800--Sobic007G088000 Sobic002G204100 Sobic002G204100 Sobic010G277800--Sobic002G204100 Sobic005G034400 Sobic005G034400 Sobic010G277800--Sobic005G034400 Sobic010G277800--Sobic004G272800 Sobic002G291200 Sobic002G291200 Sobic010G277800--Sobic002G291200 Sobic010G277800--Sobic003G253000 Sobic009G119900 Sobic009G119900 Sobic004G310300--Sobic009G119900 Sobic004G259200 Sobic004G259200 Sobic004G310300--Sobic004G259200 Sobic007G051000 Sobic007G051000 Sobic004G310300--Sobic007G051000 Sobic001G018500 Sobic001G018500 Sobic004G310300--Sobic001G018500 Sobic010G204500 Sobic010G204500 Sobic004G310300--Sobic010G204500 Sobic003G155400 Sobic003G155400 Sobic004G310300--Sobic003G155400 Sobic004G066800 Sobic004G066800 Sobic004G310300--Sobic004G066800 Sobic001G513500 Sobic001G513500 Sobic004G310300--Sobic001G513500 Sobic005G188100 Sobic005G188100 Sobic004G310300--Sobic005G188100 Sobic003G386000--Sobic004G272800 Sobic002G355300 Sobic002G355300 Sobic003G386000--Sobic002G355300 Sobic003G386000--Sobic005G188100 Sobic003G386000--Sobic003G155400 Sobic003G386000--Sobic004G310300 Sobic002G153500 Sobic002G153500 Sobic003G386000--Sobic002G153500 Sobic002G190900 Sobic002G190900 Sobic003G386000--Sobic002G190900 Sobic003G386000--Sobic001G281400 Sobic001G322500 Sobic001G322500 Sobic003G386000--Sobic001G322500 Sobic006G141500 Sobic006G141500 Sobic003G253000--Sobic006G141500 Sobic004G049900 Sobic004G049900 Sobic003G253000--Sobic004G049900 Sobic003G253000--Sobic002G267500 Sobic003G253000--Sobic004G272800 Sobic001G459200 Sobic001G459200 Sobic003G253000--Sobic001G459200 Sobic003G253000--Sobic002G345300 Sobic003G253000--Sobic002G046100 Sobic003G253000--Sobic009G185800 Sobic006G108400 Sobic006G108400 Sobic003G253000--Sobic006G108400 Sobic001G064500 Sobic001G064500 Sobic007G216300--Sobic001G064500 Sobic004G055200 Sobic004G055200 Sobic007G216300--Sobic004G055200 Sobic003G136000 Sobic003G136000 Sobic007G216300--Sobic003G136000 Sobic001G032800 Sobic001G032800 Sobic007G216300--Sobic001G032800 Sobic010G223600 Sobic010G223600 Sobic007G216300--Sobic010G223600 Sobic004G330700 Sobic004G330700 Sobic007G216300--Sobic004G330700 Sobic003G310700 Sobic003G310700 Sobic007G216300--Sobic003G310700 Sobic009G129000 Sobic009G129000 Sobic007G216300--Sobic009G129000 Sobic003G130800 Sobic003G130800 Sobic007G216300--Sobic003G130800 Sobic001G007200 Sobic001G007200 Sobic001G415500--Sobic001G007200 Sobic008G161800 Sobic008G161800 Sobic001G415500--Sobic008G161800 Sobic001G415500--Sobic003G253000 Sobic009G146100 Sobic009G146100 Sobic001G415500--Sobic009G146100 Sobic001G415500--Sobic006G108400 Sobic001G415500--Sobic006G141500 Sobic001G415500--Sobic004G049900 Sobic004G293700 Sobic004G293700 Sobic001G415500--Sobic004G293700 Sobic010G121300 Sobic010G121300 Sobic001G415500--Sobic010G121300
Octagon: transcription factors


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