Gene annotation
Transcriptome id Sobic.001G265400.1
Synonym
Functional annotation -
UniProt A0A1B6QL94
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

Open New Page


cDNA sequences
Sobic.001G265400


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G151100 12-oxophytodienoate reductase, putative, expressed K05894: 12-oxophytodienoic acid reductase
2 Sobic.004G045400 60S ribosomal protein L37a, putative, expressed K02921: RP-L37Ae, large subunit ribosomal protein L37Ae
3 Sobic.003G050400 phospholipase D, putative, expressed K01115: phospholipase D1/2
4 Sobic.008G185400 ras-related protein, putative, expressed K07889: Ras-related protein Rab-5C
5 Sobic.006G214600 - -
6 Sobic.005G188100 peptidase, T1 family, putative, expressed K02729: 20S proteasome subunit alpha 5
7 Sobic.010G205400 ribosomal protein, putative, expressed K02955: RP-S14e, small subunit ribosomal protein S14e
8 Sobic.002G125000 aquaporin protein, putative, expressed K09872: aquaporin PIP
9 Sobic.009G155200 ZOS5-08 - C2H2 zinc finger protein, expressed -
10 Sobic.009G046600 stress-related protein, putative, expressed -
11 Sobic.001G034700 actin-depolymerizing factor, putative, expressed K05765: cofilin
12 Sobic.006G159100 MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
13 Sobic.007G171000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@monodehydroascorbate reductase, putative, expressed K08232: monodehydroascorbate reductase (NADH)
14 Sobic.003G275300 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@cytidine/deoxycytidylate deaminase, putative, expressed K01489: cdd, cytidine deaminase
15 Sobic.002G046100 zinc finger A20 and AN1 domain-containing stress-associated protein, putative, expressed -
16 Sobic.003G150000 split hand/foot malformation type 1, putative, expressed K10881: SHFM1, DSS1, 26 proteasome complex subunit DSS1
17 Sobic.005G228900 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@glucan endo-1,3-beta-glucosidase precursor, putative, expressed -
18 Sobic.010G041700 B-box (BBX) protein(PubMedID : 30626335)@B-box zinc finger family protein, putative, expressed -
19 Sobic.010G204500 peptidase, T1 family, putative, expressed K02735: 20S proteasome subunit beta 3
20 Sobic.001G432000 LYR motif containing protein, putative, expressed -


Gene co-expression network
sample Sobic001G265400 Sobic001G265400 Sobic007G151100 Sobic007G151100 Sobic001G265400--Sobic007G151100 Sobic004G045400 Sobic004G045400 Sobic001G265400--Sobic004G045400 Sobic003G050400 Sobic003G050400 Sobic001G265400--Sobic003G050400 Sobic008G185400 Sobic008G185400 Sobic001G265400--Sobic008G185400 Sobic006G214600 Sobic006G214600 Sobic001G265400--Sobic006G214600 Sobic005G188100 Sobic005G188100 Sobic001G265400--Sobic005G188100 Sobic010G205400 Sobic010G205400 Sobic001G265400--Sobic010G205400 Sobic002G125000 Sobic002G125000 Sobic001G265400--Sobic002G125000 Sobic009G155200 Sobic009G155200 Sobic001G265400--Sobic009G155200 Sobic001G516600 Sobic001G516600 Sobic007G151100--Sobic001G516600 Sobic003G158500 Sobic003G158500 Sobic007G151100--Sobic003G158500 Sobic002G356101 Sobic002G356101 Sobic007G151100--Sobic002G356101 Sobic001G538866 Sobic001G538866 Sobic007G151100--Sobic001G538866 Sobic005G028700 Sobic005G028700 Sobic007G151100--Sobic005G028700 Sobic002G140300 Sobic002G140300 Sobic007G151100--Sobic002G140300 Sobic002G245100 Sobic002G245100 Sobic007G151100--Sobic002G245100 Sobic001G513700 Sobic001G513700 Sobic007G151100--Sobic001G513700 Sobic002G036100 Sobic002G036100 Sobic007G151100--Sobic002G036100 Sobic004G045400--Sobic010G205400 Sobic006G158400 Sobic006G158400 Sobic004G045400--Sobic006G158400 Sobic002G042000 Sobic002G042000 Sobic004G045400--Sobic002G042000 Sobic001G054500 Sobic001G054500 Sobic004G045400--Sobic001G054500 Sobic003G364300 Sobic003G364300 Sobic004G045400--Sobic003G364300 Sobic007G008100 Sobic007G008100 Sobic004G045400--Sobic007G008100 Sobic001G361600 Sobic001G361600 Sobic004G045400--Sobic001G361600 Sobic002G040900 Sobic002G040900 Sobic004G045400--Sobic002G040900 Sobic006G159100 Sobic006G159100 Sobic004G045400--Sobic006G159100 Sobic002G345300 Sobic002G345300 Sobic003G050400--Sobic002G345300 Sobic010G178200 Sobic010G178200 Sobic003G050400--Sobic010G178200 Sobic003G350300 Sobic003G350300 Sobic003G050400--Sobic003G350300 Sobic004G157000 Sobic004G157000 Sobic003G050400--Sobic004G157000 Sobic009G023200 Sobic009G023200 Sobic003G050400--Sobic009G023200 Sobic003G360000 Sobic003G360000 Sobic003G050400--Sobic003G360000 Sobic010G166500 Sobic010G166500 Sobic003G050400--Sobic010G166500 Sobic001G091600 Sobic001G091600 Sobic003G050400--Sobic001G091600 Sobic009G046600 Sobic009G046600 Sobic003G050400--Sobic009G046600 Sobic002G046100 Sobic002G046100 Sobic008G185400--Sobic002G046100 Sobic010G041600 Sobic010G041600 Sobic008G185400--Sobic010G041600 Sobic003G285800 Sobic003G285800 Sobic008G185400--Sobic003G285800 Sobic006G143400 Sobic006G143400 Sobic008G185400--Sobic006G143400 Sobic001G034700 Sobic001G034700 Sobic008G185400--Sobic001G034700 Sobic004G272800 Sobic004G272800 Sobic008G185400--Sobic004G272800 Sobic002G187500 Sobic002G187500 Sobic008G185400--Sobic002G187500 Sobic002G190900 Sobic002G190900 Sobic008G185400--Sobic002G190900 Sobic001G281400 Sobic001G281400 Sobic008G185400--Sobic001G281400 Sobic003G364950 Sobic003G364950 Sobic006G214600--Sobic003G364950 Sobic010G043900 Sobic010G043900 Sobic006G214600--Sobic010G043900 Sobic002G422300 Sobic002G422300 Sobic006G214600--Sobic002G422300 Sobic004G278400 Sobic004G278400 Sobic006G214600--Sobic004G278400 Sobic006G190700 Sobic006G190700 Sobic006G214600--Sobic006G190700 Sobic006G214600--Sobic001G054500 Sobic005G108601 Sobic005G108601 Sobic006G214600--Sobic005G108601 Sobic006G214600--Sobic004G045400 Sobic006G227750 Sobic006G227750 Sobic006G214600--Sobic006G227750 Sobic005G188100--Sobic002G190900 Sobic009G163800 Sobic009G163800 Sobic005G188100--Sobic009G163800 Sobic002G398901 Sobic002G398901 Sobic005G188100--Sobic002G398901 Sobic010G204500 Sobic010G204500 Sobic005G188100--Sobic010G204500 Sobic009G166500 Sobic009G166500 Sobic005G188100--Sobic009G166500 Sobic007G051000 Sobic007G051000 Sobic005G188100--Sobic007G051000 Sobic006G047400 Sobic006G047400 Sobic005G188100--Sobic006G047400 Sobic010G012500 Sobic010G012500 Sobic005G188100--Sobic010G012500 Sobic004G211833 Sobic004G211833 Sobic005G188100--Sobic004G211833 Sobic003G408100 Sobic003G408100 Sobic010G205400--Sobic003G408100 Sobic010G205400--Sobic006G047400 Sobic001G054900 Sobic001G054900 Sobic010G205400--Sobic001G054900 Sobic010G205400--Sobic004G045400 Sobic010G206200 Sobic010G206200 Sobic010G205400--Sobic010G206200 Sobic001G036900 Sobic001G036900 Sobic010G205400--Sobic001G036900 Sobic001G018900 Sobic001G018900 Sobic010G205400--Sobic001G018900 Sobic010G205400--Sobic009G163800 Sobic009G215200 Sobic009G215200 Sobic010G205400--Sobic009G215200 Sobic009G209500 Sobic009G209500 Sobic002G125000--Sobic009G209500 Sobic002G093700 Sobic002G093700 Sobic002G125000--Sobic002G093700 Sobic002G125000--Sobic004G045400 Sobic002G125000--Sobic006G159100 Sobic006G019200 Sobic006G019200 Sobic002G125000--Sobic006G019200 Sobic002G125000--Sobic003G364950 Sobic006G101300 Sobic006G101300 Sobic002G125000--Sobic006G101300 Sobic002G125000--Sobic001G265400 Sobic002G125000--Sobic001G054500 Sobic007G171000 Sobic007G171000 Sobic009G155200--Sobic007G171000 Sobic001G119000 Sobic001G119000 Sobic009G155200--Sobic001G119000 Sobic001G054400 Sobic001G054400 Sobic009G155200--Sobic001G054400 Sobic002G359300 Sobic002G359300 Sobic009G155200--Sobic002G359300 Sobic008G111100 Sobic008G111100 Sobic009G155200--Sobic008G111100 Sobic009G177800 Sobic009G177800 Sobic009G155200--Sobic009G177800 Sobic005G103300 Sobic005G103300 Sobic009G155200--Sobic005G103300 Sobic009G036700 Sobic009G036700 Sobic009G155200--Sobic009G036700 Sobic001G040200 Sobic001G040200 Sobic009G155200--Sobic001G040200
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.