Gene annotation
Transcriptome id Sobic.001G268400.1
Synonym MBP1, Sb01g026350, MCB1, ATMCB1, RPN10
Functional annotation 26S proteasome non-ATPase regulatory subunit 4, putative, expressed
UniProt C5WP38
Pfam PF13519
Panther DB PTHR10223
NCBI CDD KOG2884; 26S proteasome regulatory complex, subunit RPN10/PSMD4
KEGG Orthology K03029; PSMD4, 26S proteasome regulatory subunit N10
Gene Ontology GO:0008540; proteasome regulatory particle, base subcomplex GO:0006511ubiquitin-dependent protein catabolic process


Orthologs (automatic annotation)
TAIR AT4G38630 : regulatory particle non-ATPase 10
RAP-DB (Rice) LOC_Os03g13970.1 : 26S proteasome non-ATPase regulatory subunit 4, putative, expressed
MaizeGDB (Corn) Zm00025a052904 , Zm00025a003754
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G149500 expressed protein -
2 Sobic.002G158401 - -
3 Sobic.002G022700 CSLC10 - cellulose synthase-like family C, expressed -
4 Sobic.010G238300 - -
5 Sobic.006G014632 - -
6 Sobic.001G435700 HVA22, putative, expressed K17338: receptor expression-enhancing protein 1/2/3/4
7 Sobic.001G359000 expressed protein -
8 Sobic.004G093100 protein kinase family protein, putative, expressed -
9 Sobic.006G196100 expressed protein -
10 Sobic.002G121450 - -
11 Sobic.003G376900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pectinesterase, putative, expressed -
12 Sobic.006G082850 - -
13 Sobic.004G158600 expressed protein -
14 Sobic.010G010201 - -
15 Sobic.003G384200 beta-hexosaminidase precursor, putative, expressed K12373: hexosaminidase
16 Sobic.010G253600 OsFBL18 - F-box domain and LRR containing protein, expressed -
17 Sobic.009G048400 - -
18 Sobic.010G128350 - -
19 Sobic.010G030200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@homeobox associated leucine zipper, putative, expressed -
20 Sobic.001G020700 expressed protein -


Gene co-expression network
sample Sobic001G268400 Sobic001G268400 Sobic004G149500 Sobic004G149500 Sobic001G268400--Sobic004G149500 Sobic002G158401 Sobic002G158401 Sobic001G268400--Sobic002G158401 Sobic002G022700 Sobic002G022700 Sobic001G268400--Sobic002G022700 Sobic010G238300 Sobic010G238300 Sobic001G268400--Sobic010G238300 Sobic006G014632 Sobic006G014632 Sobic001G268400--Sobic006G014632 Sobic001G435700 Sobic001G435700 Sobic001G268400--Sobic001G435700 Sobic001G359000 Sobic001G359000 Sobic001G268400--Sobic001G359000 Sobic004G093100 Sobic004G093100 Sobic001G268400--Sobic004G093100 Sobic006G196100 Sobic006G196100 Sobic001G268400--Sobic006G196100 Sobic004G149500--Sobic002G158401 Sobic004G149500--Sobic010G238300 Sobic004G149500--Sobic004G093100 Sobic004G149500--Sobic001G359000 Sobic002G121450 Sobic002G121450 Sobic004G149500--Sobic002G121450 Sobic004G158600 Sobic004G158600 Sobic004G149500--Sobic004G158600 Sobic004G149500--Sobic001G435700 Sobic010G253600 Sobic010G253600 Sobic004G149500--Sobic010G253600 Sobic004G149500--Sobic002G022700 Sobic002G158401--Sobic004G149500 Sobic002G158401--Sobic010G238300 Sobic002G158401--Sobic004G093100 Sobic002G158401--Sobic001G359000 Sobic002G158401--Sobic002G121450 Sobic002G158401--Sobic004G158600 Sobic002G158401--Sobic001G435700 Sobic002G158401--Sobic010G253600 Sobic002G158401--Sobic002G022700 Sobic002G022700--Sobic004G149500 Sobic002G022700--Sobic002G158401 Sobic002G022700--Sobic001G435700 Sobic003G376900 Sobic003G376900 Sobic002G022700--Sobic003G376900 Sobic002G022700--Sobic004G093100 Sobic001G385300 Sobic001G385300 Sobic002G022700--Sobic001G385300 Sobic010G128350 Sobic010G128350 Sobic002G022700--Sobic010G128350 Sobic008G073500 Sobic008G073500 Sobic002G022700--Sobic008G073500 Sobic002G022700--Sobic010G238300 Sobic010G238300--Sobic010G253600 Sobic010G238300--Sobic004G093100 Sobic010G010201 Sobic010G010201 Sobic010G238300--Sobic010G010201 Sobic001G135800 Sobic001G135800 Sobic010G238300--Sobic001G135800 Sobic006G115700 Sobic006G115700 Sobic010G238300--Sobic006G115700 Sobic007G142801 Sobic007G142801 Sobic010G238300--Sobic007G142801 Sobic010G142401 Sobic010G142401 Sobic010G238300--Sobic010G142401 Sobic008G071400 Sobic008G071400 Sobic010G238300--Sobic008G071400 Sobic006G066100 Sobic006G066100 Sobic010G238300--Sobic006G066100 Sobic006G014632--Sobic001G359000 Sobic006G014632--Sobic004G149500 Sobic006G014632--Sobic002G158401 Sobic003G384200 Sobic003G384200 Sobic006G014632--Sobic003G384200 Sobic008G016500 Sobic008G016500 Sobic006G014632--Sobic008G016500 Sobic006G014632--Sobic004G158600 Sobic001G428300 Sobic001G428300 Sobic006G014632--Sobic001G428300 Sobic006G014632--Sobic010G238300 Sobic006G014632--Sobic002G022700 Sobic008G171900 Sobic008G171900 Sobic001G435700--Sobic008G171900 Sobic009G163100 Sobic009G163100 Sobic001G435700--Sobic009G163100 Sobic008G156600 Sobic008G156600 Sobic001G435700--Sobic008G156600 Sobic001G435700--Sobic004G093100 Sobic005G020600 Sobic005G020600 Sobic001G435700--Sobic005G020600 Sobic004G241300 Sobic004G241300 Sobic001G435700--Sobic004G241300 Sobic001G435700--Sobic003G376900 Sobic005G050400 Sobic005G050400 Sobic001G435700--Sobic005G050400 Sobic001G435700--Sobic010G238300 Sobic001G359000--Sobic004G149500 Sobic001G359000--Sobic002G158401 Sobic001G359000--Sobic004G158600 Sobic009G168100 Sobic009G168100 Sobic001G359000--Sobic009G168100 Sobic001G359000--Sobic006G014632 Sobic010G090000 Sobic010G090000 Sobic001G359000--Sobic010G090000 Sobic003G177600 Sobic003G177600 Sobic001G359000--Sobic003G177600 Sobic008G163900 Sobic008G163900 Sobic001G359000--Sobic008G163900 Sobic003G102100 Sobic003G102100 Sobic001G359000--Sobic003G102100 Sobic004G093100--Sobic008G071400 Sobic004G093100--Sobic010G238300 Sobic004G093100--Sobic010G253600 Sobic004G093100--Sobic006G115700 Sobic004G093100--Sobic010G010201 Sobic002G084700 Sobic002G084700 Sobic004G093100--Sobic002G084700 Sobic004G093100--Sobic001G135800 Sobic001G432200 Sobic001G432200 Sobic004G093100--Sobic001G432200 Sobic006G204500 Sobic006G204500 Sobic004G093100--Sobic006G204500 Sobic006G196100--Sobic006G115700 Sobic006G196100--Sobic004G093100 Sobic004G250800 Sobic004G250800 Sobic006G196100--Sobic004G250800 Sobic002G299500 Sobic002G299500 Sobic006G196100--Sobic002G299500 Sobic004G062200 Sobic004G062200 Sobic006G196100--Sobic004G062200 Sobic006G171600 Sobic006G171600 Sobic006G196100--Sobic006G171600 Sobic002G364700 Sobic002G364700 Sobic006G196100--Sobic002G364700 Sobic006G196100--Sobic003G376900 Sobic006G196100--Sobic005G050400
Octagon: transcription factors


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