Gene annotation
Transcriptome id Sobic.001G020700.2,Sobic.001G020700.1
Synonym Sb01g002000
Functional annotation expressed protein
UniProt C5WTW8 , A0A1Z5S3Z3
Pfam -
Panther DB PTHR35295
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G33793 : -
RAP-DB (Rice) LOC_Os03g62160.1 : expressed protein
MaizeGDB (Corn) Zm00025a008956
Brachypodium PNT73835 , KQK12251
Barley HORVU4Hr1G068380.35 , HORVU4Hr1G068380.37 , HORVU1Hr1G061400.10 , HORVU1Hr1G061400.9 , HORVU1Hr1G061400.4 , HORVU1Hr1G061400.1
Wheat TraesCS4A02G353500 , TraesCS5D02G518500 , TraesCS5D02G518500 , TraesCS4A02G353500 , TraesCS5B02G519200 , TraesCS5B02G519200
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G062200 expressed protein -
2 Sobic.001G039100 oxidoreductase, 2OG-Fe oxygenase family protein, putative, expressed -
3 Sobic.010G105000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@caleosin related protein, putative, expressed K17991: peroxygenase
4 Sobic.003G212000 OsCML12 - Calmodulin-related calcium sensor protein, expressed K13448: calcium-binding protein CML
5 Sobic.006G120900 dehydrogenase, putative, expressed K00030: isocitrate dehydrogenase (NAD+)
6 Sobic.003G380300 cytochrome c, putative, expressed K08738: cytochrome c
7 Sobic.008G050900 expressed protein -
8 Sobic.008G071300 protein phosphatase 2C, putative, expressed K17506: PPM1L, protein phosphatase 1L
9 Sobic.004G298200 Plant VAMP (vesicle-associated membrane protein) family protein(PubMedID : 26465154)@MSP domain containing protein, expressed -
10 Sobic.007G086900 zinc finger, C3HC4 type domain containing protein, expressed -
11 Sobic.001G485000 expressed protein -
12 Sobic.002G308900 ubiquitin fusion protein, putative, expressed K02927: RP-L40e, RPL40, ubiquitin-large subunit ribosomal protein L40e
13 Sobic.003G234500 CA(PubMedID : 19549309)@carbonic anhydrase(PubMedID : 26904072)@-(PubMedID : 26976818)@carbonic anhydrase, chloroplast precursor, putative, expressed K01673: cynT, carbonic anhydrase
14 Sobic.001G414650 - K08678: UXS1, UDP-glucuronate decarboxylase
15 Sobic.005G074300 - -
16 Sobic.006G070564 - K01193: INV, beta-fructofuranosidase
17 Sobic.008G006700 expressed protein -
18 Sobic.006G267100 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
19 Sobic.009G189700 - -
20 Sobic.002G113200 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@expressed protein -


Gene co-expression network
sample Sobic001G020700 Sobic001G020700 Sobic004G062200 Sobic004G062200 Sobic001G020700--Sobic004G062200 Sobic001G039100 Sobic001G039100 Sobic001G020700--Sobic001G039100 Sobic010G105000 Sobic010G105000 Sobic001G020700--Sobic010G105000 Sobic003G212000 Sobic003G212000 Sobic001G020700--Sobic003G212000 Sobic006G120900 Sobic006G120900 Sobic001G020700--Sobic006G120900 Sobic003G380300 Sobic003G380300 Sobic001G020700--Sobic003G380300 Sobic008G050900 Sobic008G050900 Sobic001G020700--Sobic008G050900 Sobic008G071300 Sobic008G071300 Sobic001G020700--Sobic008G071300 Sobic004G298200 Sobic004G298200 Sobic001G020700--Sobic004G298200 Sobic006G171600 Sobic006G171600 Sobic004G062200--Sobic006G171600 Sobic004G279200 Sobic004G279200 Sobic004G062200--Sobic004G279200 Sobic001G072000 Sobic001G072000 Sobic004G062200--Sobic001G072000 Sobic001G112600 Sobic001G112600 Sobic004G062200--Sobic001G112600 Sobic006G070564 Sobic006G070564 Sobic004G062200--Sobic006G070564 Sobic010G052900 Sobic010G052900 Sobic004G062200--Sobic010G052900 Sobic005G050400 Sobic005G050400 Sobic004G062200--Sobic005G050400 Sobic006G115700 Sobic006G115700 Sobic004G062200--Sobic006G115700 Sobic007G063800 Sobic007G063800 Sobic004G062200--Sobic007G063800 Sobic002G404600 Sobic002G404600 Sobic001G039100--Sobic002G404600 Sobic007G196700 Sobic007G196700 Sobic001G039100--Sobic007G196700 Sobic002G381500 Sobic002G381500 Sobic001G039100--Sobic002G381500 Sobic002G308900 Sobic002G308900 Sobic001G039100--Sobic002G308900 Sobic009G110600 Sobic009G110600 Sobic001G039100--Sobic009G110600 Sobic006G105100 Sobic006G105100 Sobic001G039100--Sobic006G105100 Sobic002G380300 Sobic002G380300 Sobic001G039100--Sobic002G380300 Sobic001G414650 Sobic001G414650 Sobic001G039100--Sobic001G414650 Sobic004G290500 Sobic004G290500 Sobic001G039100--Sobic004G290500 Sobic003G234500 Sobic003G234500 Sobic010G105000--Sobic003G234500 Sobic007G086900 Sobic007G086900 Sobic010G105000--Sobic007G086900 Sobic010G105000--Sobic003G212000 Sobic003G024400 Sobic003G024400 Sobic010G105000--Sobic003G024400 Sobic005G145201 Sobic005G145201 Sobic010G105000--Sobic005G145201 Sobic010G105000--Sobic003G380300 Sobic006G270000 Sobic006G270000 Sobic010G105000--Sobic006G270000 Sobic002G103800 Sobic002G103800 Sobic010G105000--Sobic002G103800 Sobic010G105000--Sobic008G071300 Sobic003G212000--Sobic003G234500 Sobic003G212000--Sobic008G071300 Sobic002G113200 Sobic002G113200 Sobic003G212000--Sobic002G113200 Sobic006G267100 Sobic006G267100 Sobic003G212000--Sobic006G267100 Sobic009G189700 Sobic009G189700 Sobic003G212000--Sobic009G189700 Sobic005G144000 Sobic005G144000 Sobic003G212000--Sobic005G144000 Sobic001G503600 Sobic001G503600 Sobic003G212000--Sobic001G503600 Sobic002G389600 Sobic002G389600 Sobic003G212000--Sobic002G389600 Sobic002G170100 Sobic002G170100 Sobic003G212000--Sobic002G170100 Sobic004G173700 Sobic004G173700 Sobic006G120900--Sobic004G173700 Sobic006G120900--Sobic003G234500 Sobic003G089100 Sobic003G089100 Sobic006G120900--Sobic003G089100 Sobic003G129900 Sobic003G129900 Sobic006G120900--Sobic003G129900 Sobic006G120900--Sobic003G380300 Sobic006G120900--Sobic003G212000 Sobic001G387200 Sobic001G387200 Sobic006G120900--Sobic001G387200 Sobic002G420600 Sobic002G420600 Sobic006G120900--Sobic002G420600 Sobic003G137600 Sobic003G137600 Sobic006G120900--Sobic003G137600 Sobic003G380300--Sobic006G120900 Sobic001G408400 Sobic001G408400 Sobic003G380300--Sobic001G408400 Sobic003G380300--Sobic001G387200 Sobic003G380300--Sobic010G105000 Sobic003G380300--Sobic004G173700 Sobic003G380300--Sobic003G234500 Sobic003G380300--Sobic003G137600 Sobic003G380300--Sobic003G129900 Sobic002G259700 Sobic002G259700 Sobic003G380300--Sobic002G259700 Sobic008G050900--Sobic001G039100 Sobic002G176000 Sobic002G176000 Sobic008G050900--Sobic002G176000 Sobic005G074300 Sobic005G074300 Sobic008G050900--Sobic005G074300 Sobic003G133201 Sobic003G133201 Sobic008G050900--Sobic003G133201 Sobic008G050900--Sobic005G144000 Sobic005G201501 Sobic005G201501 Sobic008G050900--Sobic005G201501 Sobic008G050900--Sobic006G070564 Sobic005G077001 Sobic005G077001 Sobic008G050900--Sobic005G077001 Sobic008G050900--Sobic002G381500 Sobic008G071300--Sobic006G267100 Sobic008G071300--Sobic002G170100 Sobic003G114600 Sobic003G114600 Sobic008G071300--Sobic003G114600 Sobic002G283200 Sobic002G283200 Sobic008G071300--Sobic002G283200 Sobic003G290500 Sobic003G290500 Sobic008G071300--Sobic003G290500 Sobic008G071300--Sobic001G039100 Sobic002G340600 Sobic002G340600 Sobic008G071300--Sobic002G340600 Sobic008G071300--Sobic006G105100 Sobic008G071300--Sobic001G503600 Sobic001G194800 Sobic001G194800 Sobic004G298200--Sobic001G194800 Sobic004G298200--Sobic001G112600 Sobic004G298200--Sobic006G115700 Sobic002G364700 Sobic002G364700 Sobic004G298200--Sobic002G364700 Sobic003G244400 Sobic003G244400 Sobic004G298200--Sobic003G244400 Sobic008G055200 Sobic008G055200 Sobic004G298200--Sobic008G055200 Sobic004G298200--Sobic005G050400 Sobic002G192800 Sobic002G192800 Sobic004G298200--Sobic002G192800 Sobic010G253600 Sobic010G253600 Sobic004G298200--Sobic010G253600
Octagon: transcription factors


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